RNA–Protein interactions for RNA: ENST00000462523.5

XPA-202, Transcript of XPA, DNA damage recognition and repair factor, humanhuman

TSL 5

Gene XPA, Length 1,584 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XPA-202ENST00000462523 TIPINQ9BVW5 301 aa21.28■■□□□ 1
XPA-202ENST00000462523 TRIM9Q9C026 710 aa21.28■■□□□ 1
XPA-202ENST00000462523 MAGEF1Q9HAY2 307 aa21.28■■□□□ 1
XPA-202ENST00000462523 USP25Q9UHP3 1055 aa21.28■■□□□ 1
XPA-202ENST00000462523 LAMA2P24043 3122 aaKnown RBP21.28■■□□□ 1
XPA-202ENST00000462523 H0YGN5 161 aa21.27■■□□□ 1
XPA-202ENST00000462523 CSDE1O75534 798 aaKnown RBP21.27■■□□□ 1
XPA-202ENST00000462523 SRGAP2CP0DJJ0 459 aa21.27■■□□□ 1
XPA-202ENST00000462523 AFMP43652 599 aa21.27■■□□□ 1
XPA-202ENST00000462523 ZNF131P52739 623 aa21.27■■□□□ 1
XPA-202ENST00000462523 CRYBB1P53674 252 aaPredicted RBP21.27■■□□□ 1
XPA-202ENST00000462523 LPIN1Q14693 890 aa21.27■■□□□ 1
XPA-202ENST00000462523 CEP57L1Q8IYX8 460 aa21.27■■□□□ 1
XPA-202ENST00000462523 RNF149Q8NC42 400 aa21.27■■□□□ 1
XPA-202ENST00000462523 NLRP7Q8WX94 980 aa21.27■■□□□ 1
XPA-202ENST00000462523 DRC1Q96MC2 740 aa21.27■■□□□ 1
XPA-202ENST00000462523 AGO3Q9H9G7 860 aaKnown RBP21.27■■□□□ 1
XPA-202ENST00000462523 ODF2LQ9ULJ1 636 aa21.27■■□□□ 1
XPA-202ENST00000462523 ADGRA3Q8IWK6 1321 aa21.27■■□□□ 1
XPA-202ENST00000462523 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP21.27■□□□□ 0.99
XPA-202ENST00000462523 M0QZ92 97 aa21.27■□□□□ 0.99
XPA-202ENST00000462523 ASAP2O43150 1006 aa21.27■□□□□ 0.99
XPA-202ENST00000462523 GHRP10912 638 aa21.27■□□□□ 0.99
XPA-202ENST00000462523 EPHB4P54760 987 aa21.27■□□□□ 0.99
XPA-202ENST00000462523 MDM2Q00987 491 aaPredicted RBP21.27■□□□□ 0.99
XPA-202ENST00000462523 TCTN1Q2MV58 587 aa21.27■□□□□ 0.99
XPA-202ENST00000462523 ZNF410Q86VK4 478 aa21.27■□□□□ 0.99
XPA-202ENST00000462523 KIFC3Q9BVG8 833 aa21.27■□□□□ 0.99
XPA-202ENST00000462523 BLZF1Q9H2G9 400 aa21.27■□□□□ 0.99
XPA-202ENST00000462523 MINDY3Q9H8M7 445 aa21.27■□□□□ 0.99
XPA-202ENST00000462523 CXCL10P02778 98 aa21.26■□□□□ 0.99
XPA-202ENST00000462523 DARSP14868 501 aaKnown RBP21.26■□□□□ 0.99
XPA-202ENST00000462523 CUL4BQ13620 913 aa21.26■□□□□ 0.99
XPA-202ENST00000462523 CNNM4Q6P4Q7 775 aa21.26■□□□□ 0.99
XPA-202ENST00000462523 ZNF710Q8N1W2 664 aa21.26■□□□□ 0.99
XPA-202ENST00000462523 TMEM199Q8N511 208 aa21.26■□□□□ 0.99
XPA-202ENST00000462523 CNNM3Q8NE01 707 aa21.26■□□□□ 0.99
XPA-202ENST00000462523 C7orf25Q9BPX7 421 aa21.26■□□□□ 0.99
XPA-202ENST00000462523 NOC2LQ9Y3T9 749 aaKnown RBP21.26■□□□□ 0.99
XPA-202ENST00000462523 FRMD3A2A2Y4 597 aa21.25■□□□□ 0.99
XPA-202ENST00000462523 KRT18P05783 430 aaKnown RBP21.25■□□□□ 0.99
XPA-202ENST00000462523 PRR29P0C7W0 189 aa21.25■□□□□ 0.99
XPA-202ENST00000462523 PLS3P13797 630 aa21.25■□□□□ 0.99
XPA-202ENST00000462523 EIF4BP23588 611 aaKnown RBP21.25■□□□□ 0.99
XPA-202ENST00000462523 NAMPTP43490 491 aa21.25■□□□□ 0.99
XPA-202ENST00000462523 NPTX2P47972 431 aa21.25■□□□□ 0.99
XPA-202ENST00000462523 PEX3P56589 373 aa21.25■□□□□ 0.99
XPA-202ENST00000462523 PTENP60484 403 aa21.25■□□□□ 0.99
XPA-202ENST00000462523 CDC42EP1Q00587 391 aa21.25■□□□□ 0.99
XPA-202ENST00000462523 CDCA2Q69YH5 1023 aaPredicted RBP21.25■□□□□ 0.99
XPA-202ENST00000462523 C16orf59Q7L2K0 433 aa21.25■□□□□ 0.99
XPA-202ENST00000462523 DEFB128Q7Z7B8 93 aa21.25■□□□□ 0.99
XPA-202ENST00000462523 FIZ1Q96SL8 496 aa21.25■□□□□ 0.99
XPA-202ENST00000462523 FGFR4P22455 802 aa21.24■□□□□ 0.99
XPA-202ENST00000462523 RFC2P35250 354 aa21.24■□□□□ 0.99
XPA-202ENST00000462523 MAGEA10P43363 369 aaPredicted RBP21.24■□□□□ 0.99
XPA-202ENST00000462523 FPGSQ05932 587 aa21.24■□□□□ 0.99
XPA-202ENST00000462523 POU5F1BQ06416 359 aa21.24■□□□□ 0.99
XPA-202ENST00000462523 TSHZ1Q6ZSZ6 1077 aa21.24■□□□□ 0.99
XPA-202ENST00000462523 FAM228AQ86W67 206 aa21.24■□□□□ 0.99
XPA-202ENST00000462523 IFNLR1Q8IU57 520 aaPredicted RBP21.24■□□□□ 0.99
XPA-202ENST00000462523 SCLT1Q96NL6 688 aa21.24■□□□□ 0.99
XPA-202ENST00000462523 NFKBIZQ9BYH8 718 aa21.24■□□□□ 0.99
XPA-202ENST00000462523 C17orf75Q9HAS0 396 aa21.24■□□□□ 0.99
XPA-202ENST00000462523 DACT1Q9NYF0 836 aa21.24■□□□□ 0.99
XPA-202ENST00000462523 SQORQ9Y6N5 450 aa21.24■□□□□ 0.99
XPA-202ENST00000462523 LRRIQ4A6NIV6 560 aa21.23■□□□□ 0.99
XPA-202ENST00000462523 PARNO95453 639 aaKnown RBP21.23■□□□□ 0.99
XPA-202ENST00000462523 ACRP10323 421 aa21.23■□□□□ 0.99
XPA-202ENST00000462523 CD52P31358 61 aa21.23■□□□□ 0.99
XPA-202ENST00000462523 AMPD3Q01432 767 aa21.23■□□□□ 0.99
XPA-202ENST00000462523 TFDP1Q14186 410 aa21.23■□□□□ 0.99
XPA-202ENST00000462523 PLEKHG4Q58EX7 1191 aa21.23■□□□□ 0.99
XPA-202ENST00000462523 GCOM2Q9BZD3 368 aaPredicted RBP21.23■□□□□ 0.99
XPA-202ENST00000462523 PARVGQ9HBI0 331 aa21.23■□□□□ 0.99
XPA-202ENST00000462523 FAM13AO94988 1023 aa21.23■□□□□ 0.99
XPA-202ENST00000462523 MBTD1Q05BQ5 628 aa21.23■□□□□ 0.99
XPA-202ENST00000462523 DMP1Q13316 513 aaPredicted RBP21.23■□□□□ 0.99
XPA-202ENST00000462523 GPT2Q8TD30 523 aa21.23■□□□□ 0.99
XPA-202ENST00000462523 IFT74Q96LB3 600 aa21.23■□□□□ 0.99
XPA-202ENST00000462523 TIGD1Q96MW7 591 aa21.23■□□□□ 0.99
XPA-202ENST00000462523 NTPCRQ9BSD7 190 aaKnown RBP21.23■□□□□ 0.99
XPA-202ENST00000462523 LRRC27Q9C0I9 530 aa21.23■□□□□ 0.99
XPA-202ENST00000462523 IL23AQ9NPF7 189 aa21.23■□□□□ 0.99
XPA-202ENST00000462523 ARHGAP28Q9P2N2 729 aa21.23■□□□□ 0.99
XPA-202ENST00000462523 PADI3Q9ULW8 664 aa21.23■□□□□ 0.99
XPA-202ENST00000462523 KLRC4O43908 158 aa21.22■□□□□ 0.99
XPA-202ENST00000462523 TBCAO75347 108 aaKnown RBP21.22■□□□□ 0.99
XPA-202ENST00000462523 IDEP14735 1019 aa21.22■□□□□ 0.99
XPA-202ENST00000462523 MCM4P33991 863 aa21.22■□□□□ 0.99
XPA-202ENST00000462523 PHKA2P46019 1235 aa21.22■□□□□ 0.99
XPA-202ENST00000462523 ASIC1P78348 528 aa21.22■□□□□ 0.99
XPA-202ENST00000462523 PPP2R5AQ15172 486 aa21.22■□□□□ 0.99
XPA-202ENST00000462523 ODR4Q5SWX8 454 aa21.22■□□□□ 0.99
XPA-202ENST00000462523 SFR1Q86XK3 245 aa21.22■□□□□ 0.99
XPA-202ENST00000462523 MYCT1Q8N699 235 aa21.22■□□□□ 0.99
XPA-202ENST00000462523 USP38Q8NB14 1042 aa21.22■□□□□ 0.99
XPA-202ENST00000462523 DBF4BQ8NFT6 615 aa21.22■□□□□ 0.99
XPA-202ENST00000462523 SPIRE2Q8WWL2 714 aa21.22■□□□□ 0.99
XPA-202ENST00000462523 LBHD1Q9BQE6 289 aaPredicted RBP21.22■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms