RNA–Protein interactions for RNA: ENST00000462276.1

RTF1-202, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 4

Gene RTF1, Length 485 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-202ENST00000462276 ZSWIM8A7E2V4 1837 aa11.77□□□□□ -0.52
RTF1-202ENST00000462276 A0A1W2PQ45 241 aaPredicted RBP11.77□□□□□ -0.53
RTF1-202ENST00000462276 A0A1W2PQY0 241 aa11.77□□□□□ -0.53
RTF1-202ENST00000462276 BICDL2A1A5D9 508 aa11.77□□□□□ -0.53
RTF1-202ENST00000462276 SFI1A8K8P3 1242 aa11.77□□□□□ -0.53
RTF1-202ENST00000462276 RSPH10B2B2RC85 870 aa11.77□□□□□ -0.53
RTF1-202ENST00000462276 ARVCFO00192 962 aa11.77□□□□□ -0.53
RTF1-202ENST00000462276 RSPH10BP0C881 870 aa11.77□□□□□ -0.53
RTF1-202ENST00000462276 BMP6P22004 513 aa11.77□□□□□ -0.53
RTF1-202ENST00000462276 GLRA2P23416 452 aa11.77□□□□□ -0.53
RTF1-202ENST00000462276 NCKAP1LP55160 1127 aa11.77□□□□□ -0.53
RTF1-202ENST00000462276 PEX3P56589 373 aa11.77□□□□□ -0.53
RTF1-202ENST00000462276 CHMP4BP1P59074 171 aa11.77□□□□□ -0.53
RTF1-202ENST00000462276 GTF2BQ00403 316 aa11.77□□□□□ -0.53
RTF1-202ENST00000462276 LAMTOR4Q0VGL1 99 aa11.77□□□□□ -0.53
RTF1-202ENST00000462276 HSP90AA2PQ14568 343 aaPredicted RBP11.77□□□□□ -0.53
RTF1-202ENST00000462276 C1orf53Q5VUE5 145 aa11.77□□□□□ -0.53
RTF1-202ENST00000462276 EPM2AIP1Q7L775 607 aaPredicted RBP11.77□□□□□ -0.53
RTF1-202ENST00000462276 IFNLR1Q8IU57 520 aaPredicted RBP11.77□□□□□ -0.53
RTF1-202ENST00000462276 ZBTB8OSQ8IWT0 167 aa11.77□□□□□ -0.53
RTF1-202ENST00000462276 KIAA0319LQ8IZA0 1049 aa11.77□□□□□ -0.53
RTF1-202ENST00000462276 ADSSL1Q8N142 457 aa11.77□□□□□ -0.53
RTF1-202ENST00000462276 DEPTORQ8TB45 409 aa11.77□□□□□ -0.53
RTF1-202ENST00000462276 ZNF507Q8TCN5 953 aa11.77□□□□□ -0.53
RTF1-202ENST00000462276 STRA6Q9BX79 667 aa11.77□□□□□ -0.53
RTF1-202ENST00000462276 INO80BQ9C086 356 aaPredicted RBP11.77□□□□□ -0.53
RTF1-202ENST00000462276 MCOLN1Q9GZU1 580 aa11.77□□□□□ -0.53
RTF1-202ENST00000462276 TMEM134Q9H6X4 195 aa11.77□□□□□ -0.53
RTF1-202ENST00000462276 SLC39A2Q9NP94 309 aa11.77□□□□□ -0.53
RTF1-202ENST00000462276 GPRC5CQ9NQ84 441 aa11.77□□□□□ -0.53
RTF1-202ENST00000462276 KMT5AQ9NQR1 393 aa11.77□□□□□ -0.53
RTF1-202ENST00000462276 MROH7Q68CQ1 1323 aa11.77□□□□□ -0.53
RTF1-202ENST00000462276 CCDC169A6NNP5 214 aa11.76□□□□□ -0.53
RTF1-202ENST00000462276 SMTNL1A8MU46 457 aa11.76□□□□□ -0.53
RTF1-202ENST00000462276 PPP1R3GB7ZBB8 358 aa11.76□□□□□ -0.53
RTF1-202ENST00000462276 GCNT3O95395 438 aa11.76□□□□□ -0.53
RTF1-202ENST00000462276 CYP2C9P11712 490 aa11.76□□□□□ -0.53
RTF1-202ENST00000462276 PRCPP42785 496 aa11.76□□□□□ -0.53
RTF1-202ENST00000462276 PHKA2P46019 1235 aa11.76□□□□□ -0.53
RTF1-202ENST00000462276 ZNF165P49910 485 aa11.76□□□□□ -0.53
RTF1-202ENST00000462276 PTK7Q13308 1070 aa11.76□□□□□ -0.53
RTF1-202ENST00000462276 MKRN4PQ13434 485 aaPredicted RBP11.76□□□□□ -0.53
RTF1-202ENST00000462276 KNOP1Q1ED39 458 aaKnown RBP11.76□□□□□ -0.53
RTF1-202ENST00000462276 DPCR1Q3MIW9 517 aa11.76□□□□□ -0.53
RTF1-202ENST00000462276 FAM47CQ5HY64 1035 aa11.76□□□□□ -0.53
RTF1-202ENST00000462276 HAUS6Q7Z4H7 955 aa11.76□□□□□ -0.53
RTF1-202ENST00000462276 SERINC5Q86VE9 423 aa11.76□□□□□ -0.53
RTF1-202ENST00000462276 KIAA0895Q8NCT3 520 aa11.76□□□□□ -0.53
RTF1-202ENST00000462276 TMEM161BQ8NDZ6 487 aa11.76□□□□□ -0.53
RTF1-202ENST00000462276 ENOX1Q8TC92 643 aaKnown RBP11.76□□□□□ -0.53
RTF1-202ENST00000462276 FAM200AQ8TCP9 573 aa11.76□□□□□ -0.53
RTF1-202ENST00000462276 TMEM174Q8WUU8 243 aa11.76□□□□□ -0.53
RTF1-202ENST00000462276 TRAPPC12Q8WVT3 735 aa11.76□□□□□ -0.53
RTF1-202ENST00000462276 ACCSQ96QU6 501 aa11.76□□□□□ -0.53
RTF1-202ENST00000462276 FIZ1Q96SL8 496 aa11.76□□□□□ -0.53
RTF1-202ENST00000462276 ARHGAP28Q9P2N2 729 aa11.76□□□□□ -0.53
RTF1-202ENST00000462276 RWDD2AQ9UIY3 292 aa11.76□□□□□ -0.53
RTF1-202ENST00000462276 NOD1Q9Y239 953 aa11.76□□□□□ -0.53
RTF1-202ENST00000462276 AKT3Q9Y243 479 aa11.76□□□□□ -0.53
RTF1-202ENST00000462276 GRIN2DO15399 1336 aa11.76□□□□□ -0.53
RTF1-202ENST00000462276 TNRC18O15417 2968 aaPredicted RBP11.75□□□□□ -0.53
RTF1-202ENST00000462276 K7ERI5 159 aa11.75□□□□□ -0.53
RTF1-202ENST00000462276 M0QZ92 97 aa11.75□□□□□ -0.53
RTF1-202ENST00000462276 PDXKO00764 312 aa11.75□□□□□ -0.53
RTF1-202ENST00000462276 IKBKBO14920 756 aa11.75□□□□□ -0.53
RTF1-202ENST00000462276 TREHO43280 583 aa11.75□□□□□ -0.53
RTF1-202ENST00000462276 PPP1R37O75864 691 aa11.75□□□□□ -0.53
RTF1-202ENST00000462276 FGFR1OPO95684 399 aaKnown RBP11.75□□□□□ -0.53
RTF1-202ENST00000462276 CCNE1P24864 410 aa11.75□□□□□ -0.53
RTF1-202ENST00000462276 CDK7P50613 346 aa11.75□□□□□ -0.53
RTF1-202ENST00000462276 CLCN3P51790 818 aa11.75□□□□□ -0.53
RTF1-202ENST00000462276 PTENP60484 403 aa11.75□□□□□ -0.53
RTF1-202ENST00000462276 LRRC63Q05C16 580 aa11.75□□□□□ -0.53
RTF1-202ENST00000462276 STRN3Q13033 797 aa11.75□□□□□ -0.53
RTF1-202ENST00000462276 PAK1Q13153 545 aa11.75□□□□□ -0.53
RTF1-202ENST00000462276 MYBPC2Q14324 1141 aa11.75□□□□□ -0.53
RTF1-202ENST00000462276 PTGISQ16647 500 aa11.75□□□□□ -0.53
RTF1-202ENST00000462276 ANO6Q4KMQ2 910 aa11.75□□□□□ -0.53
RTF1-202ENST00000462276 L1TD1Q5T7N2 865 aaKnown RBP11.75□□□□□ -0.53
RTF1-202ENST00000462276 CDCA2Q69YH5 1023 aaPredicted RBP11.75□□□□□ -0.53
RTF1-202ENST00000462276 ISM2Q6H9L7 571 aa11.75□□□□□ -0.53
RTF1-202ENST00000462276 CENPPQ6IPU0 288 aa11.75□□□□□ -0.53
RTF1-202ENST00000462276 GDF6Q6KF10 455 aaPredicted RBP11.75□□□□□ -0.53
RTF1-202ENST00000462276 HS2ST1Q7LGA3 356 aa11.75□□□□□ -0.53
RTF1-202ENST00000462276 SRGAP1Q7Z6B7 1085 aa11.75□□□□□ -0.53
RTF1-202ENST00000462276 RHPN2Q8IUC4 686 aa11.75□□□□□ -0.53
RTF1-202ENST00000462276 LRRC71Q8N4P6 559 aa11.75□□□□□ -0.53
RTF1-202ENST00000462276 RNF149Q8NC42 400 aa11.75□□□□□ -0.53
RTF1-202ENST00000462276 ASAP3Q8TDY4 903 aa11.75□□□□□ -0.53
RTF1-202ENST00000462276 SCFD1Q8WVM8 642 aa11.75□□□□□ -0.53
RTF1-202ENST00000462276 TOX2Q96NM4 488 aa11.75□□□□□ -0.53
RTF1-202ENST00000462276 TSG101Q99816 390 aa11.75□□□□□ -0.53
RTF1-202ENST00000462276 GCOM2Q9BZD3 368 aaPredicted RBP11.75□□□□□ -0.53
RTF1-202ENST00000462276 GDAQ9Y2T3 454 aa11.75□□□□□ -0.53
RTF1-202ENST00000462276 DENND3A2RUS2 1198 aa11.74□□□□□ -0.53
RTF1-202ENST00000462276 LRRIQ4A6NIV6 560 aa11.74□□□□□ -0.53
RTF1-202ENST00000462276 BECN2A8MW95 431 aa11.74□□□□□ -0.53
RTF1-202ENST00000462276 K7ENM7 598 aa11.74□□□□□ -0.53
RTF1-202ENST00000462276 SLC16A4O15374 487 aa11.74□□□□□ -0.53
RTF1-202ENST00000462276 TLR3O15455 904 aaKnown RBP11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms