RNA–Protein interactions for RNA: ENST00000462236.1

COPS3-204, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 5

Gene COPS3, Length 551 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-204ENST00000462236 ZC3H7AQ8IWR0 971 aaKnown RBP6.33□□□□□ -1.4
COPS3-204ENST00000462236 DHX37Q8IY37 1157 aaKnown RBP6.33□□□□□ -1.4
COPS3-204ENST00000462236 CELF4Q9BZC1 486 aaKnown RBP6.33□□□□□ -1.4
COPS3-204ENST00000462236 NUDT5Q9UKK9 219 aa6.33□□□□□ -1.4
COPS3-204ENST00000462236 RWDD3Q9Y3V2 267 aa6.33□□□□□ -1.4
COPS3-204ENST00000462236 TNPO3Q9Y5L0 923 aaKnown RBP6.33□□□□□ -1.4
COPS3-204ENST00000462236 ZNF646O15015 1829 aaPredicted RBP6.33□□□□□ -1.4
COPS3-204ENST00000462236 COL6A3P12111 3177 aa6.33□□□□□ -1.4
COPS3-204ENST00000462236 A0A087X0B3 334 aa6.32□□□□□ -1.4
COPS3-204ENST00000462236 ABLIM1O14639 778 aa6.32□□□□□ -1.4
COPS3-204ENST00000462236 IRS4O14654 1257 aaPredicted RBP6.32□□□□□ -1.4
COPS3-204ENST00000462236 MAFKO60675 156 aa6.32□□□□□ -1.4
COPS3-204ENST00000462236 RASGRP1O95267 797 aa6.32□□□□□ -1.4
COPS3-204ENST00000462236 MPOP05164 745 aa6.32□□□□□ -1.4
COPS3-204ENST00000462236 GLI1P08151 1106 aa6.32□□□□□ -1.4
COPS3-204ENST00000462236 MSL3P1P0C860 447 aa6.32□□□□□ -1.4
COPS3-204ENST00000462236 ALDH1B1P30837 517 aa6.32□□□□□ -1.4
COPS3-204ENST00000462236 SOX5P35711 763 aa6.32□□□□□ -1.4
COPS3-204ENST00000462236 EMC4Q5J8M3 183 aa6.32□□□□□ -1.4
COPS3-204ENST00000462236 HABP4Q5JVS0 413 aaKnown RBP6.32□□□□□ -1.4
COPS3-204ENST00000462236 WWC2Q6AWC2 1192 aa6.32□□□□□ -1.4
COPS3-204ENST00000462236 ZNF662Q6ZS27 426 aa6.32□□□□□ -1.4
COPS3-204ENST00000462236 ZSWIM9Q86XI8 627 aa6.32□□□□□ -1.4
COPS3-204ENST00000462236 TEX2Q8IWB9 1127 aa6.32□□□□□ -1.4
COPS3-204ENST00000462236 Q8N3U1 123 aa6.32□□□□□ -1.4
COPS3-204ENST00000462236 IL17REQ8NFR9 667 aa6.32□□□□□ -1.4
COPS3-204ENST00000462236 RNF32Q9H0A6 362 aa6.32□□□□□ -1.4
COPS3-204ENST00000462236 CAAP1Q9H8G2 361 aa6.32□□□□□ -1.4
COPS3-204ENST00000462236 SAGE1Q9NXZ1 904 aa6.32□□□□□ -1.4
COPS3-204ENST00000462236 GPRC5DQ9NZD1 345 aa6.32□□□□□ -1.4
COPS3-204ENST00000462236 FBXL7Q9UJT9 491 aa6.32□□□□□ -1.4
COPS3-204ENST00000462236 COL3A1P02461 1466 aaPredicted RBP6.32□□□□□ -1.4
COPS3-204ENST00000462236 ABCC12Q96J65 1359 aa6.31□□□□□ -1.4
COPS3-204ENST00000462236 DUOX1Q9NRD9 1551 aa6.31□□□□□ -1.4
COPS3-204ENST00000462236 KIF7Q2M1P5 1343 aa6.31□□□□□ -1.4
COPS3-204ENST00000462236 GSG1L2A8MUP6 293 aa6.31□□□□□ -1.4
COPS3-204ENST00000462236 KRIT1O00522 736 aa6.31□□□□□ -1.4
COPS3-204ENST00000462236 CELF2O95319 508 aaKnown RBP6.31□□□□□ -1.4
COPS3-204ENST00000462236 CKMP06732 381 aa6.31□□□□□ -1.4
COPS3-204ENST00000462236 MYCLP1P12525 358 aaPredicted RBP6.31□□□□□ -1.4
COPS3-204ENST00000462236 TRHRP34981 398 aaPredicted RBP6.31□□□□□ -1.4
COPS3-204ENST00000462236 STAT3P40763 770 aa6.31□□□□□ -1.4
COPS3-204ENST00000462236 SOX10P56693 466 aa6.31□□□□□ -1.4
COPS3-204ENST00000462236 LACTBP83111 547 aaPredicted RBP6.31□□□□□ -1.4
COPS3-204ENST00000462236 NOGQ13253 232 aa6.31□□□□□ -1.4
COPS3-204ENST00000462236 SLC9A5Q14940 896 aa6.31□□□□□ -1.4
COPS3-204ENST00000462236 C21orf62-AS1Q17RA5 79 aa6.31□□□□□ -1.4
COPS3-204ENST00000462236 OLFML2BQ68BL8 750 aa6.31□□□□□ -1.4
COPS3-204ENST00000462236 BICRALQ6AI39 1079 aa6.31□□□□□ -1.4
COPS3-204ENST00000462236 NBPF5PQ86XG9 351 aaPredicted RBP6.31□□□□□ -1.4
COPS3-204ENST00000462236 THNSL2Q86YJ6 484 aa6.31□□□□□ -1.4
COPS3-204ENST00000462236 PHOSPHO1Q8TCT1 267 aa6.31□□□□□ -1.4
COPS3-204ENST00000462236 CHAC2Q8WUX2 184 aa6.31□□□□□ -1.4
COPS3-204ENST00000462236 JDP2Q8WYK2 163 aa6.31□□□□□ -1.4
COPS3-204ENST00000462236 SEC14L1Q92503 715 aa6.31□□□□□ -1.4
COPS3-204ENST00000462236 PEX11GQ96HA9 241 aa6.31□□□□□ -1.4
COPS3-204ENST00000462236 INTS4Q96HW7 963 aaKnown RBP6.31□□□□□ -1.4
COPS3-204ENST00000462236 IPPKQ9H8X2 491 aa6.31□□□□□ -1.4
COPS3-204ENST00000462236 SLC6A20Q9NP91 592 aa6.31□□□□□ -1.4
COPS3-204ENST00000462236 ADARB2Q9NS39 739 aaKnown RBP6.31□□□□□ -1.4
COPS3-204ENST00000462236 USP16Q9Y5T5 823 aa6.31□□□□□ -1.4
COPS3-204ENST00000462236 IBTKQ9P2D0 1353 aaPredicted RBP6.31□□□□□ -1.4
COPS3-204ENST00000462236 LAMA3Q16787 3333 aa6.3□□□□□ -1.4
COPS3-204ENST00000462236 CDHR2Q9BYE9 1310 aa6.3□□□□□ -1.4
COPS3-204ENST00000462236 PDE8AO60658 829 aa6.3□□□□□ -1.4
COPS3-204ENST00000462236 EFEMP2O95967 443 aa6.3□□□□□ -1.4
COPS3-204ENST00000462236 DBHP09172 617 aa6.3□□□□□ -1.4
COPS3-204ENST00000462236 FPR2P25090 351 aa6.3□□□□□ -1.4
COPS3-204ENST00000462236 GPR19Q15760 415 aa6.3□□□□□ -1.4
COPS3-204ENST00000462236 CRY1Q16526 586 aa6.3□□□□□ -1.4
COPS3-204ENST00000462236 KCNMB1Q16558 191 aa6.3□□□□□ -1.4
COPS3-204ENST00000462236 ARHGAP44Q17R89 818 aa6.3□□□□□ -1.4
COPS3-204ENST00000462236 CFAP100Q494V2 611 aa6.3□□□□□ -1.4
COPS3-204ENST00000462236 FYB2Q5VWT5 728 aa6.3□□□□□ -1.4
COPS3-204ENST00000462236 OTOP3Q7RTS5 596 aa6.3□□□□□ -1.4
COPS3-204ENST00000462236 FILIP1Q7Z7B0 1213 aa6.3□□□□□ -1.4
COPS3-204ENST00000462236 TTC5Q8N0Z6 440 aa6.3□□□□□ -1.4
COPS3-204ENST00000462236 PPIL4Q8WUA2 492 aaKnown RBP eCLIP6.3□□□□□ -1.4
COPS3-204ENST00000462236 GLIS2Q9BZE0 524 aaPredicted RBP6.3□□□□□ -1.4
COPS3-204ENST00000462236 AP5M1Q9H0R1 490 aa6.3□□□□□ -1.4
COPS3-204ENST00000462236 VPS33BQ9H267 617 aa6.3□□□□□ -1.4
COPS3-204ENST00000462236 IFT57Q9NWB7 429 aa6.3□□□□□ -1.4
COPS3-204ENST00000462236 FAM53CQ9NYF3 392 aa6.3□□□□□ -1.4
COPS3-204ENST00000462236 NCOR1O75376 2440 aa6.3□□□□□ -1.4
COPS3-204ENST00000462236 NPC1L1Q9UHC9 1359 aa6.3□□□□□ -1.4
COPS3-204ENST00000462236 CCDC66A2RUB6 948 aa6.29□□□□□ -1.4
COPS3-204ENST00000462236 OR14I1A6ND48 311 aa6.29□□□□□ -1.4
COPS3-204ENST00000462236 HGSO14964 777 aaPredicted RBP6.29□□□□□ -1.4
COPS3-204ENST00000462236 KCNQ3O43525 872 aa6.29□□□□□ -1.4
COPS3-204ENST00000462236 TADA3O75528 432 aa6.29□□□□□ -1.4
COPS3-204ENST00000462236 NTRK1P04629 796 aa6.29□□□□□ -1.4
COPS3-204ENST00000462236 JMJD7P0C870 316 aa6.29□□□□□ -1.4
COPS3-204ENST00000462236 GNAT1P11488 350 aa6.29□□□□□ -1.4
COPS3-204ENST00000462236 IRAK1P51617 712 aa6.29□□□□□ -1.4
COPS3-204ENST00000462236 CXCL9Q07325 125 aa6.29□□□□□ -1.4
COPS3-204ENST00000462236 GRM1Q13255 1194 aa6.29□□□□□ -1.4
COPS3-204ENST00000462236 CDCA2Q69YH5 1023 aaPredicted RBP6.29□□□□□ -1.4
COPS3-204ENST00000462236 WNK4Q96J92 1243 aa6.29□□□□□ -1.4
COPS3-204ENST00000462236 FMNL2Q96PY5 1086 aa6.29□□□□□ -1.4
COPS3-204ENST00000462236 TARS2Q9BW92 718 aaKnown RBP6.29□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms