RNA–Protein interactions for RNA: ENST00000462030.5

HPS3-204, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 2

Gene HPS3, Length 2,486 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-204ENST00000462030 CCDC50Q8IVM0 306 aa19.97■□□□□ 0.79
HPS3-204ENST00000462030 KSR1Q8IVT5 923 aa19.97■□□□□ 0.79
HPS3-204ENST00000462030 LRRC34Q8IZ02 419 aa19.97■□□□□ 0.79
HPS3-204ENST00000462030 RPTORQ8N122 1335 aa19.97■□□□□ 0.79
HPS3-204ENST00000462030 N4BP2L2Q92802 583 aaPredicted RBP19.97■□□□□ 0.79
HPS3-204ENST00000462030 PGM2Q96G03 612 aa19.97■□□□□ 0.79
HPS3-204ENST00000462030 TACO1Q9BSH4 297 aaKnown RBP19.97■□□□□ 0.79
HPS3-204ENST00000462030 STK33Q9BYT3 514 aa19.97■□□□□ 0.79
HPS3-204ENST00000462030 DIS3Q9Y2L1 958 aaKnown RBP19.97■□□□□ 0.79
HPS3-204ENST00000462030 FAM187AA6NFU0 413 aa19.96■□□□□ 0.79
HPS3-204ENST00000462030 VCAM1P19320 739 aa19.96■□□□□ 0.79
HPS3-204ENST00000462030 ATP2B4P23634 1241 aa19.96■□□□□ 0.79
HPS3-204ENST00000462030 NMT1P30419 496 aaKnown RBP19.96■□□□□ 0.79
HPS3-204ENST00000462030 NF2P35240 595 aa19.96■□□□□ 0.79
HPS3-204ENST00000462030 SNAP25P60880 206 aa19.96■□□□□ 0.79
HPS3-204ENST00000462030 ELF3P78545 371 aaPredicted RBP19.96■□□□□ 0.79
HPS3-204ENST00000462030 MAPK7Q13164 816 aa19.96■□□□□ 0.79
HPS3-204ENST00000462030 CBWD6Q4V339 395 aa19.96■□□□□ 0.79
HPS3-204ENST00000462030 ZC2HC1CQ53FD0 456 aaPredicted RBP19.96■□□□□ 0.79
HPS3-204ENST00000462030 CBWD3Q5JTY5 395 aa19.96■□□□□ 0.79
HPS3-204ENST00000462030 CBWD5Q5RIA9 395 aa19.96■□□□□ 0.79
HPS3-204ENST00000462030 CNBD1Q8NA66 436 aa19.96■□□□□ 0.79
HPS3-204ENST00000462030 GRHL1Q9NZI5 618 aa19.96■□□□□ 0.79
HPS3-204ENST00000462030 TAL1P17542 331 aaPredicted RBP19.96■□□□□ 0.79
HPS3-204ENST00000462030 FMO5P49326 533 aa19.96■□□□□ 0.79
HPS3-204ENST00000462030 MSL1Q68DK7 614 aa19.96■□□□□ 0.79
HPS3-204ENST00000462030 BARGINQ6ZT62 677 aa19.96■□□□□ 0.79
HPS3-204ENST00000462030 SEMA4AQ9H3S1 761 aa19.96■□□□□ 0.79
HPS3-204ENST00000462030 RGS16O15492 202 aaPredicted RBP19.95■□□□□ 0.78
HPS3-204ENST00000462030 TRIM49P0CI25 452 aa19.95■□□□□ 0.78
HPS3-204ENST00000462030 TRIM49CP0CI26 452 aa19.95■□□□□ 0.78
HPS3-204ENST00000462030 PTGIRP43119 386 aa19.95■□□□□ 0.78
HPS3-204ENST00000462030 MARCKSL1P49006 195 aa19.95■□□□□ 0.78
HPS3-204ENST00000462030 GTF2IP78347 998 aa19.95■□□□□ 0.78
HPS3-204ENST00000462030 DHX34Q14147 1143 aaKnown RBP19.95■□□□□ 0.78
HPS3-204ENST00000462030 SHROOM1Q2M3G4 852 aaPredicted RBP19.95■□□□□ 0.78
HPS3-204ENST00000462030 HIBCHQ6NVY1 386 aaPredicted RBP19.95■□□□□ 0.78
HPS3-204ENST00000462030 MOXD1Q6UVY6 613 aa19.95■□□□□ 0.78
HPS3-204ENST00000462030 MAGEC3Q8TD91 643 aa19.95■□□□□ 0.78
HPS3-204ENST00000462030 RPGRQ92834 1020 aaKnown RBP19.95■□□□□ 0.78
HPS3-204ENST00000462030 NAP1L3Q99457 506 aaPredicted RBP19.95■□□□□ 0.78
HPS3-204ENST00000462030 RGL1Q9NZL6 768 aa19.95■□□□□ 0.78
HPS3-204ENST00000462030 POLLQ9UGP5 575 aa19.95■□□□□ 0.78
HPS3-204ENST00000462030 GREB1LQ9C091 1923 aaPredicted RBP19.95■□□□□ 0.78
HPS3-204ENST00000462030 CCDC169A6NNP5 214 aa19.95■□□□□ 0.78
HPS3-204ENST00000462030 PSMC2P35998 433 aaKnown RBP19.95■□□□□ 0.78
HPS3-204ENST00000462030 PPP1R7Q15435 360 aa19.95■□□□□ 0.78
HPS3-204ENST00000462030 ARHGAP44Q17R89 818 aa19.95■□□□□ 0.78
HPS3-204ENST00000462030 SLC30A10Q6XR72 485 aa19.95■□□□□ 0.78
HPS3-204ENST00000462030 PIGWQ7Z7B1 504 aa19.95■□□□□ 0.78
HPS3-204ENST00000462030 EPS8L3Q8TE67 593 aaKnown RBP19.95■□□□□ 0.78
HPS3-204ENST00000462030 TBC1D22AQ8WUA7 517 aa19.95■□□□□ 0.78
HPS3-204ENST00000462030 PRMT1Q99873 361 aaKnown RBP19.95■□□□□ 0.78
HPS3-204ENST00000462030 GLT8D2Q9H1C3 349 aa19.95■□□□□ 0.78
HPS3-204ENST00000462030 RABGAP1Q9Y3P9 1069 aa19.95■□□□□ 0.78
HPS3-204ENST00000462030 FRMPD4Q14CM0 1322 aa19.94■□□□□ 0.78
HPS3-204ENST00000462030 UBAP1LF5GYI3 381 aa19.94■□□□□ 0.78
HPS3-204ENST00000462030 SLCO1A2P46721 670 aa19.94■□□□□ 0.78
HPS3-204ENST00000462030 RPL21P46778 160 aaKnown RBP19.94■□□□□ 0.78
HPS3-204ENST00000462030 PPP2R5EQ16537 467 aa19.94■□□□□ 0.78
HPS3-204ENST00000462030 PIGOQ8TEQ8 1089 aa19.94■□□□□ 0.78
HPS3-204ENST00000462030 KRT35Q92764 455 aa19.94■□□□□ 0.78
HPS3-204ENST00000462030 EML1O00423 815 aa19.94■□□□□ 0.78
HPS3-204ENST00000462030 ASAP2O43150 1006 aa19.94■□□□□ 0.78
HPS3-204ENST00000462030 ATP6V1G2O95670 118 aa19.94■□□□□ 0.78
HPS3-204ENST00000462030 TNFAIP3P21580 790 aa19.94■□□□□ 0.78
HPS3-204ENST00000462030 FGFR4P22455 802 aa19.94■□□□□ 0.78
HPS3-204ENST00000462030 AP3B2Q13367 1082 aa19.94■□□□□ 0.78
HPS3-204ENST00000462030 Q4G0T1 1027 aa19.94■□□□□ 0.78
HPS3-204ENST00000462030 TAX1BP1Q86VP1 789 aa19.94■□□□□ 0.78
HPS3-204ENST00000462030 ZDHHC14Q8IZN3 488 aa19.94■□□□□ 0.78
HPS3-204ENST00000462030 ANKS4BQ8N8V4 417 aa19.94■□□□□ 0.78
HPS3-204ENST00000462030 CYP2W1Q8TAV3 490 aa19.94■□□□□ 0.78
HPS3-204ENST00000462030 ELAC2Q9BQ52 826 aaKnown RBP19.94■□□□□ 0.78
HPS3-204ENST00000462030 INTS9Q9NV88 658 aaKnown RBP19.94■□□□□ 0.78
HPS3-204ENST00000462030 VAV3Q9UKW4 847 aa19.94■□□□□ 0.78
HPS3-204ENST00000462030 SLC12A4Q9UP95 1085 aa19.94■□□□□ 0.78
HPS3-204ENST00000462030 C10orf71Q711Q0 1435 aa19.94■□□□□ 0.78
HPS3-204ENST00000462030 KDM4FA0A1W2PPD8 638 aa19.93■□□□□ 0.78
HPS3-204ENST00000462030 MSH4O15457 936 aa19.93■□□□□ 0.78
HPS3-204ENST00000462030 PHF2O75151 1096 aa19.93■□□□□ 0.78
HPS3-204ENST00000462030 LRRN2O75325 713 aa19.93■□□□□ 0.78
HPS3-204ENST00000462030 IFNAR2P48551 515 aa19.93■□□□□ 0.78
HPS3-204ENST00000462030 FAM98CQ17RN3 349 aaKnown RBP19.93■□□□□ 0.78
HPS3-204ENST00000462030 RINT1Q6NUQ1 792 aa19.93■□□□□ 0.78
HPS3-204ENST00000462030 TTC27Q6P3X3 843 aa19.93■□□□□ 0.78
HPS3-204ENST00000462030 PRELID2Q8N945 189 aa19.93■□□□□ 0.78
HPS3-204ENST00000462030 EIF2AK1Q9BQI3 630 aaKnown RBP19.93■□□□□ 0.78
HPS3-204ENST00000462030 INTS2Q9H0H0 1204 aaKnown RBP19.93■□□□□ 0.78
HPS3-204ENST00000462030 OLFML3Q9NRN5 406 aa19.93■□□□□ 0.78
HPS3-204ENST00000462030 RASAL2Q9UJF2 1139 aa19.93■□□□□ 0.78
HPS3-204ENST00000462030 TRPC6Q9Y210 931 aa19.93■□□□□ 0.78
HPS3-204ENST00000462030 ALG6Q9Y672 507 aa19.93■□□□□ 0.78
HPS3-204ENST00000462030 ANKRD62A6NC57 917 aa19.93■□□□□ 0.78
HPS3-204ENST00000462030 TBX3O15119 743 aa19.93■□□□□ 0.78
HPS3-204ENST00000462030 EYA4O95677 639 aa19.93■□□□□ 0.78
HPS3-204ENST00000462030 ADAMTSL1Q8N6G6 1762 aa19.92■□□□□ 0.78
HPS3-204ENST00000462030 TMEM110-MUSTN1A8MSY1 372 aa19.92■□□□□ 0.78
HPS3-204ENST00000462030 EZRP15311 586 aaKnown RBP19.92■□□□□ 0.78
HPS3-204ENST00000462030 CYP2J2P51589 502 aa19.92■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms