RNA–Protein interactions for RNA: ENST00000461862.5

SCNM1-204, Transcript of sodium channel modifier 1, humanhuman

TSL 2

Gene SCNM1, Length 1,094 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCNM1-204ENST00000461862 HOXA7P31268 230 aaPredicted RBP11.53□□□□□ -0.56
SCNM1-204ENST00000461862 AFMP43652 599 aa11.53□□□□□ -0.56
SCNM1-204ENST00000461862 AMPD3Q01432 767 aa11.53□□□□□ -0.56
SCNM1-204ENST00000461862 TMEM119Q4V9L6 283 aa11.53□□□□□ -0.56
SCNM1-204ENST00000461862 PRR16Q569H4 304 aa11.53□□□□□ -0.56
SCNM1-204ENST00000461862 NAALADL2Q58DX5 795 aa11.53□□□□□ -0.56
SCNM1-204ENST00000461862 SARM1Q6SZW1 724 aa11.53□□□□□ -0.56
SCNM1-204ENST00000461862 TREML1Q86YW5 311 aa11.53□□□□□ -0.56
SCNM1-204ENST00000461862 DHX40Q8IX18 779 aaKnown RBP11.53□□□□□ -0.56
SCNM1-204ENST00000461862 GRAMD1CQ8IYS0 662 aa11.53□□□□□ -0.56
SCNM1-204ENST00000461862 CPXCR1Q8N123 301 aa11.53□□□□□ -0.56
SCNM1-204ENST00000461862 FAM43AQ8N2R8 423 aa11.53□□□□□ -0.56
SCNM1-204ENST00000461862 ERMNQ8TAM6 284 aa11.53□□□□□ -0.56
SCNM1-204ENST00000461862 SNX29Q8TEQ0 813 aa11.53□□□□□ -0.56
SCNM1-204ENST00000461862 CDK5RAP3Q96JB5 506 aa11.53□□□□□ -0.56
SCNM1-204ENST00000461862 LPIN3Q9BQK8 851 aa11.53□□□□□ -0.56
SCNM1-204ENST00000461862 MMTAG2Q9BU76 263 aaKnown RBP11.53□□□□□ -0.56
SCNM1-204ENST00000461862 LRRC27Q9C0I9 530 aa11.53□□□□□ -0.56
SCNM1-204ENST00000461862 NT5C3AQ9H0P0 336 aa11.53□□□□□ -0.56
SCNM1-204ENST00000461862 C11orf16Q9NQ32 467 aa11.53□□□□□ -0.56
SCNM1-204ENST00000461862 RNF146Q9NTX7 359 aa11.53□□□□□ -0.56
SCNM1-204ENST00000461862 ZNF214Q9UL59 606 aaPredicted RBP11.53□□□□□ -0.56
SCNM1-204ENST00000461862 IGLV3-22A0A075B6J6 115 aa11.52□□□□□ -0.57
SCNM1-204ENST00000461862 FAM86B1E9PN63 330 aa11.52□□□□□ -0.57
SCNM1-204ENST00000461862 NFIBO00712 420 aa11.52□□□□□ -0.57
SCNM1-204ENST00000461862 ATG7O95352 703 aa11.52□□□□□ -0.57
SCNM1-204ENST00000461862 TBC1D8O95759 1140 aa11.52□□□□□ -0.57
SCNM1-204ENST00000461862 FAM86B2P0C5J1 330 aa11.52□□□□□ -0.57
SCNM1-204ENST00000461862 CPB1P15086 417 aa11.52□□□□□ -0.57
SCNM1-204ENST00000461862 CDC25AP30304 524 aa11.52□□□□□ -0.57
SCNM1-204ENST00000461862 MYL5Q02045 173 aa11.52□□□□□ -0.57
SCNM1-204ENST00000461862 PLAURQ03405 335 aa11.52□□□□□ -0.57
SCNM1-204ENST00000461862 NOGQ13253 232 aa11.52□□□□□ -0.57
SCNM1-204ENST00000461862 PABPC4Q13310 644 aaKnown RBP eCLIP11.52□□□□□ -0.57
SCNM1-204ENST00000461862 KCNB1Q14721 858 aa11.52□□□□□ -0.57
SCNM1-204ENST00000461862 CEP55Q53EZ4 464 aa11.52□□□□□ -0.57
SCNM1-204ENST00000461862 FAM26DQ5JW98 314 aa11.52□□□□□ -0.57
SCNM1-204ENST00000461862 XRRA1Q6P2D8 792 aa11.52□□□□□ -0.57
SCNM1-204ENST00000461862 LBX2Q6XYB7 198 aa11.52□□□□□ -0.57
SCNM1-204ENST00000461862 CAPN12Q6ZSI9 719 aa11.52□□□□□ -0.57
SCNM1-204ENST00000461862 FAM35AQ86V20 835 aa11.52□□□□□ -0.57
SCNM1-204ENST00000461862 AOPEPQ8N6M6 819 aa11.52□□□□□ -0.57
SCNM1-204ENST00000461862 SYTL5Q8TDW5 730 aaPredicted RBP11.52□□□□□ -0.57
SCNM1-204ENST00000461862 TBC1D5Q92609 795 aa11.52□□□□□ -0.57
SCNM1-204ENST00000461862 CCDC47Q96A33 483 aaKnown RBP11.52□□□□□ -0.57
SCNM1-204ENST00000461862 RNF186Q9NXI6 227 aa11.52□□□□□ -0.57
SCNM1-204ENST00000461862 CCL15-CCL14A0A0B4J2E2 113 aa11.51□□□□□ -0.57
SCNM1-204ENST00000461862 MSH4O15457 936 aa11.51□□□□□ -0.57
SCNM1-204ENST00000461862 TRPA1O75762 1119 aa11.51□□□□□ -0.57
SCNM1-204ENST00000461862 RARAP10276 462 aa11.51□□□□□ -0.57
SCNM1-204ENST00000461862 HSPA8P11142 646 aaKnown RBP11.51□□□□□ -0.57
SCNM1-204ENST00000461862 ERCC5P28715 1186 aaPredicted RBP11.51□□□□□ -0.57
SCNM1-204ENST00000461862 RPS6P62753 249 aaKnown RBP11.51□□□□□ -0.57
SCNM1-204ENST00000461862 MLLT1Q03111 559 aaPredicted RBP11.51□□□□□ -0.57
SCNM1-204ENST00000461862 GRB10Q13322 594 aa11.51□□□□□ -0.57
SCNM1-204ENST00000461862 TMEM132BQ14DG7 1078 aa11.51□□□□□ -0.57
SCNM1-204ENST00000461862 CCL15Q16663 113 aa11.51□□□□□ -0.57
SCNM1-204ENST00000461862 HS1BP3Q53T59 392 aa11.51□□□□□ -0.57
SCNM1-204ENST00000461862 MUM1L1Q5H9M0 696 aa11.51□□□□□ -0.57
SCNM1-204ENST00000461862 TREML2Q5T2D2 321 aa11.51□□□□□ -0.57
SCNM1-204ENST00000461862 TMEM164Q5U3C3 297 aa11.51□□□□□ -0.57
SCNM1-204ENST00000461862 PCNX4Q63HM2 1172 aa11.51□□□□□ -0.57
SCNM1-204ENST00000461862 SNRNP48Q6IEG0 339 aaKnown RBP11.51□□□□□ -0.57
SCNM1-204ENST00000461862 CNNM4Q6P4Q7 775 aa11.51□□□□□ -0.57
SCNM1-204ENST00000461862 RNF207Q6ZRF8 634 aa11.51□□□□□ -0.57
SCNM1-204ENST00000461862 FASTKD5Q7L8L6 764 aaKnown RBP11.51□□□□□ -0.57
SCNM1-204ENST00000461862 PLA2G4DQ86XP0 818 aa11.51□□□□□ -0.57
SCNM1-204ENST00000461862 ETFBKMTQ8IXQ9 262 aa11.51□□□□□ -0.57
SCNM1-204ENST00000461862 CHST13Q8NET6 341 aa11.51□□□□□ -0.57
SCNM1-204ENST00000461862 SLC5A5Q92911 643 aa11.51□□□□□ -0.57
SCNM1-204ENST00000461862 C7orf25Q9BPX7 421 aa11.51□□□□□ -0.57
SCNM1-204ENST00000461862 WDR11Q9BZH6 1224 aa11.51□□□□□ -0.57
SCNM1-204ENST00000461862 ZMYND15Q9H091 742 aa11.51□□□□□ -0.57
SCNM1-204ENST00000461862 ACAD9Q9H845 621 aa11.51□□□□□ -0.57
SCNM1-204ENST00000461862 AGTPBP1Q9UPW5 1226 aa11.51□□□□□ -0.57
SCNM1-204ENST00000461862 A0A087WWV3 80 aa11.5□□□□□ -0.57
SCNM1-204ENST00000461862 BTBD19C9JJ37 291 aa11.5□□□□□ -0.57
SCNM1-204ENST00000461862 MEIS1O00470 390 aa11.5□□□□□ -0.57
SCNM1-204ENST00000461862 RGS9O75916 674 aaPredicted RBP11.5□□□□□ -0.57
SCNM1-204ENST00000461862 ADCY5O95622 1261 aa11.5□□□□□ -0.57
SCNM1-204ENST00000461862 RPN1P04843 607 aaKnown RBP11.5□□□□□ -0.57
SCNM1-204ENST00000461862 SELPP16109 830 aa11.5□□□□□ -0.57
SCNM1-204ENST00000461862 BMP6P22004 513 aa11.5□□□□□ -0.57
SCNM1-204ENST00000461862 MUTP22033 750 aa11.5□□□□□ -0.57
SCNM1-204ENST00000461862 COPB2P35606 906 aa11.5□□□□□ -0.57
SCNM1-204ENST00000461862 MAP2K2P36507 400 aa11.5□□□□□ -0.57
SCNM1-204ENST00000461862 CCT6AP40227 531 aaKnown RBP11.5□□□□□ -0.57
SCNM1-204ENST00000461862 PPP1R2P41236 205 aa11.5□□□□□ -0.57
SCNM1-204ENST00000461862 IRX3P78415 501 aaPredicted RBP11.5□□□□□ -0.57
SCNM1-204ENST00000461862 GPLD1P80108 840 aa11.5□□□□□ -0.57
SCNM1-204ENST00000461862 SPIRE1Q08AE8 756 aa11.5□□□□□ -0.57
SCNM1-204ENST00000461862 CUL4BQ13620 913 aa11.5□□□□□ -0.57
SCNM1-204ENST00000461862 PERM1Q5SV97 790 aa11.5□□□□□ -0.57
SCNM1-204ENST00000461862 GADL1Q6ZQY3 521 aa11.5□□□□□ -0.57
SCNM1-204ENST00000461862 SV2BQ7L1I2 683 aa11.5□□□□□ -0.57
SCNM1-204ENST00000461862 ARHGAP30Q7Z6I6 1101 aaPredicted RBP11.5□□□□□ -0.57
SCNM1-204ENST00000461862 RGL4Q8IZJ4 473 aa11.5□□□□□ -0.57
SCNM1-204ENST00000461862 GTF3C2Q8WUA4 911 aaPredicted RBP11.5□□□□□ -0.57
SCNM1-204ENST00000461862 LARP4BQ92615 738 aaKnown RBP11.5□□□□□ -0.57
SCNM1-204ENST00000461862 RAD54LQ92698 747 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms