RNA–Protein interactions for RNA: ENST00000461115.5

IFT88-204, Transcript of intraflagellar transport 88, humanhuman

TSL 2

Gene IFT88, Length 1,440 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT88-204ENST00000461115 ACRBPQ8NEB7 543 aa11.91□□□□□ -0.5
IFT88-204ENST00000461115 MCPH1Q8NEM0 835 aa11.91□□□□□ -0.5
IFT88-204ENST00000461115 AFAP1L1Q8TED9 768 aa11.91□□□□□ -0.5
IFT88-204ENST00000461115 SMCR8Q8TEV9 937 aaPredicted RBP11.91□□□□□ -0.5
IFT88-204ENST00000461115 ACCSQ96QU6 501 aa11.91□□□□□ -0.5
IFT88-204ENST00000461115 WDR24Q96S15 920 aa11.91□□□□□ -0.5
IFT88-204ENST00000461115 TUBB2BQ9BVA1 445 aa11.91□□□□□ -0.5
IFT88-204ENST00000461115 NIFKQ9BYG3 293 aaKnown RBP11.91□□□□□ -0.5
IFT88-204ENST00000461115 MMRN2Q9H8L6 949 aa11.91□□□□□ -0.5
IFT88-204ENST00000461115 TXNRD2Q9NNW7 524 aa11.91□□□□□ -0.5
IFT88-204ENST00000461115 FAM207AQ9NSI2 230 aaPredicted RBP11.91□□□□□ -0.5
IFT88-204ENST00000461115 ARHGAP20Q9P2F6 1191 aa11.91□□□□□ -0.5
IFT88-204ENST00000461115 GABBR1Q9UBS5 961 aa11.91□□□□□ -0.5
IFT88-204ENST00000461115 DNAI1Q9UI46 699 aa11.91□□□□□ -0.5
IFT88-204ENST00000461115 ATP8B3O60423 1300 aa11.91□□□□□ -0.5
IFT88-204ENST00000461115 PLXNB2O15031 1838 aa11.9□□□□□ -0.5
IFT88-204ENST00000461115 TLR2O60603 784 aa11.9□□□□□ -0.5
IFT88-204ENST00000461115 NUDT7P0C024 238 aa11.9□□□□□ -0.5
IFT88-204ENST00000461115 ATP4AP20648 1035 aa11.9□□□□□ -0.5
IFT88-204ENST00000461115 PON1P27169 355 aa11.9□□□□□ -0.5
IFT88-204ENST00000461115 ANXA13P27216 316 aa11.9□□□□□ -0.5
IFT88-204ENST00000461115 NPEPPSP55786 919 aa11.9□□□□□ -0.5
IFT88-204ENST00000461115 FSTL1Q12841 308 aa11.9□□□□□ -0.5
IFT88-204ENST00000461115 NEDD9Q14511 834 aa11.9□□□□□ -0.5
IFT88-204ENST00000461115 XKR9Q5GH70 373 aa11.9□□□□□ -0.5
IFT88-204ENST00000461115 HAUS6Q7Z4H7 955 aa11.9□□□□□ -0.5
IFT88-204ENST00000461115 MAP4K3Q8IVH8 894 aa11.9□□□□□ -0.5
IFT88-204ENST00000461115 CCDC155Q8N6L0 562 aa11.9□□□□□ -0.5
IFT88-204ENST00000461115 TMEM161BQ8NDZ6 487 aa11.9□□□□□ -0.5
IFT88-204ENST00000461115 KRTAP3-3Q9BYR6 98 aa11.9□□□□□ -0.5
IFT88-204ENST00000461115 KRTAP3-2Q9BYR7 98 aa11.9□□□□□ -0.5
IFT88-204ENST00000461115 POLD4Q9HCU8 107 aa11.9□□□□□ -0.5
IFT88-204ENST00000461115 XPNPEP1Q9NQW7 623 aa11.9□□□□□ -0.5
IFT88-204ENST00000461115 GSTTP1A0A1W2PQM5 241 aa11.89□□□□□ -0.51
IFT88-204ENST00000461115 LRRC53A6NM62 1247 aa11.89□□□□□ -0.51
IFT88-204ENST00000461115 K7ENM7 598 aa11.89□□□□□ -0.51
IFT88-204ENST00000461115 ZNF263O14978 683 aa11.89□□□□□ -0.51
IFT88-204ENST00000461115 P4HA2O15460 535 aa11.89□□□□□ -0.51
IFT88-204ENST00000461115 PJA2O43164 708 aa11.89□□□□□ -0.51
IFT88-204ENST00000461115 KIF5CO60282 957 aa11.89□□□□□ -0.51
IFT88-204ENST00000461115 USO1O60763 962 aaKnown RBP11.89□□□□□ -0.51
IFT88-204ENST00000461115 FARP2O94887 1054 aaPredicted RBP11.89□□□□□ -0.51
IFT88-204ENST00000461115 SLU7O95391 586 aaKnown RBP11.89□□□□□ -0.51
IFT88-204ENST00000461115 PRKCIP41743 596 aa11.89□□□□□ -0.51
IFT88-204ENST00000461115 MMRN1Q13201 1228 aa11.89□□□□□ -0.51
IFT88-204ENST00000461115 TARBP2Q15633 366 aaKnown RBP11.89□□□□□ -0.51
IFT88-204ENST00000461115 Q3C1V9 767 aa11.89□□□□□ -0.51
IFT88-204ENST00000461115 KLHDC7AQ5VTJ3 777 aa11.89□□□□□ -0.51
IFT88-204ENST00000461115 SWSAP1Q6NVH7 229 aa11.89□□□□□ -0.51
IFT88-204ENST00000461115 METTL7BQ6UX53 244 aa11.89□□□□□ -0.51
IFT88-204ENST00000461115 GBP6Q6ZN66 633 aa11.89□□□□□ -0.51
IFT88-204ENST00000461115 FAM186BQ8IYM0 893 aa11.89□□□□□ -0.51
IFT88-204ENST00000461115 ANKRD7Q92527 254 aa11.89□□□□□ -0.51
IFT88-204ENST00000461115 ERO1AQ96HE7 468 aa11.89□□□□□ -0.51
IFT88-204ENST00000461115 FBXL18Q96ME1 805 aa11.89□□□□□ -0.51
IFT88-204ENST00000461115 PCMTD1Q96MG8 357 aaPredicted RBP11.89□□□□□ -0.51
IFT88-204ENST00000461115 MPHOSPH6Q99547 160 aaKnown RBP11.89□□□□□ -0.51
IFT88-204ENST00000461115 DHX33Q9H6R0 707 aaKnown RBP11.89□□□□□ -0.51
IFT88-204ENST00000461115 SIX2Q9NPC8 291 aa11.89□□□□□ -0.51
IFT88-204ENST00000461115 CYP26B1Q9NR63 512 aa11.89□□□□□ -0.51
IFT88-204ENST00000461115 PNMA3Q9UL41 463 aa11.89□□□□□ -0.51
IFT88-204ENST00000461115 TRPM7Q96QT4 1865 aa11.89□□□□□ -0.51
IFT88-204ENST00000461115 ZNF236Q9UL36 1845 aa11.88□□□□□ -0.51
IFT88-204ENST00000461115 A0A0U1RQJ8 604 aa11.88□□□□□ -0.51
IFT88-204ENST00000461115 H0YCG3 227 aa11.88□□□□□ -0.51
IFT88-204ENST00000461115 CLIC2O15247 247 aa11.88□□□□□ -0.51
IFT88-204ENST00000461115 LGR5O75473 907 aa11.88□□□□□ -0.51
IFT88-204ENST00000461115 SERPING1P05155 500 aa11.88□□□□□ -0.51
IFT88-204ENST00000461115 UBA1P22314 1058 aaKnown RBP11.88□□□□□ -0.51
IFT88-204ENST00000461115 NPTX2P47972 431 aa11.88□□□□□ -0.51
IFT88-204ENST00000461115 VAV2P52735 878 aa11.88□□□□□ -0.51
IFT88-204ENST00000461115 SMTNP53814 917 aa11.88□□□□□ -0.51
IFT88-204ENST00000461115 JAM2P57087 298 aa11.88□□□□□ -0.51
IFT88-204ENST00000461115 GNG11P61952 73 aa11.88□□□□□ -0.51
IFT88-204ENST00000461115 ERVK-9P63128 1117 aa11.88□□□□□ -0.51
IFT88-204ENST00000461115 PRKCEQ02156 737 aa11.88□□□□□ -0.51
IFT88-204ENST00000461115 BFSP1Q12934 665 aa11.88□□□□□ -0.51
IFT88-204ENST00000461115 GPR162Q16538 588 aa11.88□□□□□ -0.51
IFT88-204ENST00000461115 EXOC3L4Q17RC7 722 aa11.88□□□□□ -0.51
IFT88-204ENST00000461115 ARHGAP29Q52LW3 1261 aa11.88□□□□□ -0.51
IFT88-204ENST00000461115 UTP14CQ5TAP6 766 aaKnown RBP11.88□□□□□ -0.51
IFT88-204ENST00000461115 PLA2G4FQ68DD2 849 aa11.88□□□□□ -0.51
IFT88-204ENST00000461115 INTS8Q75QN2 995 aaKnown RBP11.88□□□□□ -0.51
IFT88-204ENST00000461115 RRAGAQ7L523 313 aa11.88□□□□□ -0.51
IFT88-204ENST00000461115 NCAPG2Q86XI2 1143 aa11.88□□□□□ -0.51
IFT88-204ENST00000461115 ATRIPQ8WXE1 791 aa11.88□□□□□ -0.51
IFT88-204ENST00000461115 ZNF592Q92610 1267 aa11.88□□□□□ -0.51
IFT88-204ENST00000461115 LSM14BQ9BX40 385 aaKnown RBP11.88□□□□□ -0.51
IFT88-204ENST00000461115 ARHGAP28Q9P2N2 729 aa11.88□□□□□ -0.51
IFT88-204ENST00000461115 MORF4L1Q9UBU8 362 aa11.88□□□□□ -0.51
IFT88-204ENST00000461115 EXOC7Q9UPT5 735 aa11.88□□□□□ -0.51
IFT88-204ENST00000461115 FRMD4BQ9Y2L6 1034 aa11.88□□□□□ -0.51
IFT88-204ENST00000461115 TELO2Q9Y4R8 837 aa11.88□□□□□ -0.51
IFT88-204ENST00000461115 MRFAP1Q9Y605 127 aa11.88□□□□□ -0.51
IFT88-204ENST00000461115 TMEM150BA6NC51 233 aa11.87□□□□□ -0.51
IFT88-204ENST00000461115 PEX10O60683 326 aa11.87□□□□□ -0.51
IFT88-204ENST00000461115 PIGRP01833 764 aa11.87□□□□□ -0.51
IFT88-204ENST00000461115 OATP04181 439 aa11.87□□□□□ -0.51
IFT88-204ENST00000461115 UCHL3P15374 230 aa11.87□□□□□ -0.51
IFT88-204ENST00000461115 RFX1P22670 979 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms