RNA–Protein interactions for RNA: ENST00000460569.1

UPF2-204, Transcript of UPF2, regulator of nonsense mediated mRNA decay, humanhuman

TSL 2

Gene UPF2, Length 640 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2-204ENST00000460569 CCDC47Q96A33 483 aaKnown RBP11.25□□□□□ -0.61
UPF2-204ENST00000460569 SYAP1Q96A49 352 aaPredicted RBP11.25□□□□□ -0.61
UPF2-204ENST00000460569 PRDM5Q9NQX1 630 aaPredicted RBP11.25□□□□□ -0.61
UPF2-204ENST00000460569 TMEM39AQ9NV64 488 aa11.25□□□□□ -0.61
UPF2-204ENST00000460569 EXOC1Q9NV70 894 aa11.25□□□□□ -0.61
UPF2-204ENST00000460569 LARSQ9P2J5 1176 aaKnown RBP11.25□□□□□ -0.61
UPF2-204ENST00000460569 TRPV2Q9Y5S1 764 aa11.25□□□□□ -0.61
UPF2-204ENST00000460569 LTBP2Q14767 1821 aa11.24□□□□□ -0.61
UPF2-204ENST00000460569 PVALEFA0A1B0GWK0 134 aa11.24□□□□□ -0.61
UPF2-204ENST00000460569 FRMD3A2A2Y4 597 aa11.24□□□□□ -0.61
UPF2-204ENST00000460569 ASAP2O43150 1006 aa11.24□□□□□ -0.61
UPF2-204ENST00000460569 CAND2O75155 1236 aa11.24□□□□□ -0.61
UPF2-204ENST00000460569 RPN1P04843 607 aaKnown RBP11.24□□□□□ -0.61
UPF2-204ENST00000460569 CKBP12277 381 aa11.24□□□□□ -0.61
UPF2-204ENST00000460569 NAMPTP43490 491 aa11.24□□□□□ -0.61
UPF2-204ENST00000460569 PHKA2P46019 1235 aa11.24□□□□□ -0.61
UPF2-204ENST00000460569 SKOR2Q2VWA4 1001 aaPredicted RBP11.24□□□□□ -0.61
UPF2-204ENST00000460569 HERC4Q5GLZ8 1057 aaPredicted RBP11.24□□□□□ -0.61
UPF2-204ENST00000460569 CCDC183Q5T5S1 534 aa11.24□□□□□ -0.61
UPF2-204ENST00000460569 ZNF618Q5T7W0 954 aa11.24□□□□□ -0.61
UPF2-204ENST00000460569 CAVIN1Q6NZI2 390 aaKnown RBP11.24□□□□□ -0.61
UPF2-204ENST00000460569 RPAINQ86UA6 219 aa11.24□□□□□ -0.61
UPF2-204ENST00000460569 ZNF410Q86VK4 478 aa11.24□□□□□ -0.61
UPF2-204ENST00000460569 FAM178BQ8IXR5 827 aa11.24□□□□□ -0.61
UPF2-204ENST00000460569 C7orf61Q8IZ16 206 aa11.24□□□□□ -0.61
UPF2-204ENST00000460569 NME8Q8N427 588 aa11.24□□□□□ -0.61
UPF2-204ENST00000460569 DEPTORQ8TB45 409 aa11.24□□□□□ -0.61
UPF2-204ENST00000460569 OSMRQ99650 979 aa11.24□□□□□ -0.61
UPF2-204ENST00000460569 KIFC3Q9BVG8 833 aa11.24□□□□□ -0.61
UPF2-204ENST00000460569 NOC4LQ9BVI4 516 aaKnown RBP11.24□□□□□ -0.61
UPF2-204ENST00000460569 PPP1R12CQ9BZL4 782 aa11.24□□□□□ -0.61
UPF2-204ENST00000460569 HIPK3Q9H422 1215 aa11.24□□□□□ -0.61
UPF2-204ENST00000460569 C17orf75Q9HAS0 396 aa11.24□□□□□ -0.61
UPF2-204ENST00000460569 KMT5AQ9NQR1 393 aa11.24□□□□□ -0.61
UPF2-204ENST00000460569 TBC1D7Q9P0N9 293 aa11.24□□□□□ -0.61
UPF2-204ENST00000460569 SEL1LQ9UBV2 794 aa11.24□□□□□ -0.61
UPF2-204ENST00000460569 TBX21Q9UL17 535 aa11.24□□□□□ -0.61
UPF2-204ENST00000460569 PCDHA5Q9Y5H7 936 aa11.24□□□□□ -0.61
UPF2-204ENST00000460569 CDY2AQ9Y6F7 541 aa11.24□□□□□ -0.61
UPF2-204ENST00000460569 SCN5AQ14524 2016 aa11.24□□□□□ -0.61
UPF2-204ENST00000460569 A0A087WZ62 844 aa11.23□□□□□ -0.61
UPF2-204ENST00000460569 K7ENM7 598 aa11.23□□□□□ -0.61
UPF2-204ENST00000460569 PITPNM1O00562 1244 aa11.23□□□□□ -0.61
UPF2-204ENST00000460569 SLC16A4O15374 487 aa11.23□□□□□ -0.61
UPF2-204ENST00000460569 KLRC4O43908 158 aa11.23□□□□□ -0.61
UPF2-204ENST00000460569 TRAK2O60296 914 aa11.23□□□□□ -0.61
UPF2-204ENST00000460569 GPR32O75388 356 aa11.23□□□□□ -0.61
UPF2-204ENST00000460569 NPTX2P47972 431 aa11.23□□□□□ -0.61
UPF2-204ENST00000460569 SMTNP53814 917 aa11.23□□□□□ -0.61
UPF2-204ENST00000460569 CDC42EP1Q00587 391 aa11.23□□□□□ -0.61
UPF2-204ENST00000460569 RBL2Q08999 1139 aa11.23□□□□□ -0.61
UPF2-204ENST00000460569 MGAT3Q09327 533 aa11.23□□□□□ -0.61
UPF2-204ENST00000460569 KMT5BQ4FZB7 885 aa11.23□□□□□ -0.61
UPF2-204ENST00000460569 FAM26FQ5R3K3 315 aa11.23□□□□□ -0.61
UPF2-204ENST00000460569 LRRC8DQ7L1W4 858 aa11.23□□□□□ -0.61
UPF2-204ENST00000460569 ZBTB8OSQ8IWT0 167 aa11.23□□□□□ -0.61
UPF2-204ENST00000460569 ZNF710Q8N1W2 664 aa11.23□□□□□ -0.61
UPF2-204ENST00000460569 HPS3Q969F9 1004 aa11.23□□□□□ -0.61
UPF2-204ENST00000460569 FDXACB1Q9BRP7 624 aaPredicted RBP11.23□□□□□ -0.61
UPF2-204ENST00000460569 CELF4Q9BZC1 486 aaKnown RBP11.23□□□□□ -0.61
UPF2-204ENST00000460569 C2orf40Q9H1Z8 148 aa11.23□□□□□ -0.61
UPF2-204ENST00000460569 ADAMTS10Q9H324 1103 aa11.23□□□□□ -0.61
UPF2-204ENST00000460569 MRPL44Q9H9J2 332 aaKnown RBP11.23□□□□□ -0.61
UPF2-204ENST00000460569 RMND1Q9NWS8 449 aa11.23□□□□□ -0.61
UPF2-204ENST00000460569 TMEM63CQ9P1W3 806 aa11.23□□□□□ -0.61
UPF2-204ENST00000460569 UMODL1Q5DID0 1318 aa11.23□□□□□ -0.61
UPF2-204ENST00000460569 ADGRA3Q8IWK6 1321 aa11.23□□□□□ -0.61
UPF2-204ENST00000460569 EVI5O60447 810 aa11.22□□□□□ -0.61
UPF2-204ENST00000460569 GCNT3O95395 438 aa11.22□□□□□ -0.61
UPF2-204ENST00000460569 CHRNA1P02708 482 aa11.22□□□□□ -0.61
UPF2-204ENST00000460569 RAG1P15918 1043 aa11.22□□□□□ -0.61
UPF2-204ENST00000460569 SELPP16109 830 aa11.22□□□□□ -0.61
UPF2-204ENST00000460569 NMT1P30419 496 aaKnown RBP11.22□□□□□ -0.61
UPF2-204ENST00000460569 CYP2C18P33260 490 aa11.22□□□□□ -0.61
UPF2-204ENST00000460569 CRYBB1P53674 252 aaPredicted RBP11.22□□□□□ -0.61
UPF2-204ENST00000460569 NCKAP1LP55160 1127 aa11.22□□□□□ -0.61
UPF2-204ENST00000460569 PTENP60484 403 aa11.22□□□□□ -0.61
UPF2-204ENST00000460569 KCNB1Q14721 858 aa11.22□□□□□ -0.61
UPF2-204ENST00000460569 FAM26DQ5JW98 314 aa11.22□□□□□ -0.61
UPF2-204ENST00000460569 CDCA2Q69YH5 1023 aaPredicted RBP11.22□□□□□ -0.61
UPF2-204ENST00000460569 PHLPP2Q6ZVD8 1323 aa11.22□□□□□ -0.61
UPF2-204ENST00000460569 SPIRE2Q8WWL2 714 aa11.22□□□□□ -0.61
UPF2-204ENST00000460569 GSDMAQ96QA5 445 aa11.22□□□□□ -0.61
UPF2-204ENST00000460569 GCOM2Q9BZD3 368 aaPredicted RBP11.22□□□□□ -0.61
UPF2-204ENST00000460569 CDHR5Q9HBB8 845 aa11.22□□□□□ -0.61
UPF2-204ENST00000460569 OLFML3Q9NRN5 406 aa11.22□□□□□ -0.61
UPF2-204ENST00000460569 KIAA1468Q9P260 1216 aa11.22□□□□□ -0.61
UPF2-204ENST00000460569 ARHGAP28Q9P2N2 729 aa11.22□□□□□ -0.61
UPF2-204ENST00000460569 PRKAG2Q9UGJ0 569 aa11.22□□□□□ -0.61
UPF2-204ENST00000460569 DENND3A2RUS2 1198 aa11.21□□□□□ -0.61
UPF2-204ENST00000460569 TRIM43BA6NCK2 446 aa11.21□□□□□ -0.61
UPF2-204ENST00000460569 H0YCG3 227 aa11.21□□□□□ -0.61
UPF2-204ENST00000460569 INO80B-WBP1J3KQ70 363 aa11.21□□□□□ -0.61
UPF2-204ENST00000460569 BIN1O00499 593 aa11.21□□□□□ -0.61
UPF2-204ENST00000460569 KIAA0355O15063 1070 aa11.21□□□□□ -0.61
UPF2-204ENST00000460569 CAPN15O75808 1086 aa11.21□□□□□ -0.61
UPF2-204ENST00000460569 RHOBTB3O94955 611 aa11.21□□□□□ -0.61
UPF2-204ENST00000460569 MYBP10242 640 aa11.21□□□□□ -0.61
UPF2-204ENST00000460569 GHRP10912 638 aa11.21□□□□□ -0.61
UPF2-204ENST00000460569 DARSP14868 501 aaKnown RBP11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms