RNA–Protein interactions for RNA: ENST00000460170.2

PTPRU-205, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 1 (best) BASIC

Gene PTPRU, Length 5,337 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-205ENST00000460170 HAUS6Q7Z4H7 955 aa15.84■□□□□ 0.13
PTPRU-205ENST00000460170 RUBCNQ92622 972 aa15.84■□□□□ 0.13
PTPRU-205ENST00000460170 RBM41Q96IZ5 413 aaKnown RBP15.84■□□□□ 0.13
PTPRU-205ENST00000460170 NUP85Q9BW27 656 aa15.84■□□□□ 0.13
PTPRU-205ENST00000460170 EIF2AK3Q9NZJ5 1116 aaKnown RBP15.84■□□□□ 0.13
PTPRU-205ENST00000460170 PALM3A6NDB9 673 aaPredicted RBP15.84■□□□□ 0.13
PTPRU-205ENST00000460170 ANKRD65E5RJM6 399 aa15.84■□□□□ 0.13
PTPRU-205ENST00000460170 CA4P22748 312 aa15.84■□□□□ 0.13
PTPRU-205ENST00000460170 PSMD6Q15008 389 aa15.84■□□□□ 0.13
PTPRU-205ENST00000460170 FAM133BQ5BKY9 247 aaKnown RBP15.84■□□□□ 0.13
PTPRU-205ENST00000460170 CFAP61Q8NHU2 1237 aa15.84■□□□□ 0.13
PTPRU-205ENST00000460170 HEMGNQ9BXL5 484 aa15.84■□□□□ 0.13
PTPRU-205ENST00000460170 GABBR1Q9UBS5 961 aa15.84■□□□□ 0.13
PTPRU-205ENST00000460170 PSMD14O00487 310 aa15.83■□□□□ 0.13
PTPRU-205ENST00000460170 SLC26A4O43511 780 aa15.83■□□□□ 0.13
PTPRU-205ENST00000460170 MARK3P27448 753 aa15.83■□□□□ 0.13
PTPRU-205ENST00000460170 FXR2P51116 673 aaKnown RBP eCLIP15.83■□□□□ 0.13
PTPRU-205ENST00000460170 VPS72Q15906 364 aa15.83■□□□□ 0.13
PTPRU-205ENST00000460170 ZNF394Q53GI3 561 aa15.83■□□□□ 0.13
PTPRU-205ENST00000460170 MAP3K21Q5TCX8 1036 aa15.83■□□□□ 0.13
PTPRU-205ENST00000460170 STRIP1Q5VSL9 837 aa15.83■□□□□ 0.13
PTPRU-205ENST00000460170 TMEM270Q6UE05 265 aa15.83■□□□□ 0.13
PTPRU-205ENST00000460170 HHIPL2Q6UWX4 724 aa15.83■□□□□ 0.13
PTPRU-205ENST00000460170 DAGLBQ8NCG7 672 aa15.83■□□□□ 0.13
PTPRU-205ENST00000460170 GDAP1Q8TB36 358 aa15.83■□□□□ 0.13
PTPRU-205ENST00000460170 L2HGDHQ9H9P8 463 aa15.83■□□□□ 0.13
PTPRU-205ENST00000460170 MAD2L2Q9UI95 211 aa15.83■□□□□ 0.13
PTPRU-205ENST00000460170 NOL3O60936 208 aaKnown RBP15.83■□□□□ 0.12
PTPRU-205ENST00000460170 MMEP08473 750 aa15.83■□□□□ 0.12
PTPRU-205ENST00000460170 MYO1EQ12965 1108 aa15.83■□□□□ 0.12
PTPRU-205ENST00000460170 ZNF667Q5HYK9 610 aa15.83■□□□□ 0.12
PTPRU-205ENST00000460170 NUGGCQ68CJ6 796 aa15.83■□□□□ 0.12
PTPRU-205ENST00000460170 CDC42EP5Q6NZY7 148 aa15.83■□□□□ 0.12
PTPRU-205ENST00000460170 PYROXD1Q8WU10 500 aa15.83■□□□□ 0.12
PTPRU-205ENST00000460170 HEXIM2Q96MH2 286 aaKnown RBP15.83■□□□□ 0.12
PTPRU-205ENST00000460170 REEP2Q9BRK0 252 aa15.83■□□□□ 0.12
PTPRU-205ENST00000460170 C11orf70Q9BRQ4 267 aa15.83■□□□□ 0.12
PTPRU-205ENST00000460170 SNX25Q9H3E2 840 aa15.83■□□□□ 0.12
PTPRU-205ENST00000460170 JMJD4Q9H9V9 463 aa15.83■□□□□ 0.12
PTPRU-205ENST00000460170 HOXC10Q9NYD6 342 aa15.83■□□□□ 0.12
PTPRU-205ENST00000460170 CNTNAP4Q9C0A0 1308 aa15.83■□□□□ 0.12
PTPRU-205ENST00000460170 A0A1W2PQJ5 194 aa15.83■□□□□ 0.12
PTPRU-205ENST00000460170 FAM187AA6NFU0 413 aa15.83■□□□□ 0.12
PTPRU-205ENST00000460170 MAGOHP61326 146 aaKnown RBP15.83■□□□□ 0.12
PTPRU-205ENST00000460170 SPP2Q13103 211 aa15.83■□□□□ 0.12
PTPRU-205ENST00000460170 MORC4Q8TE76 937 aa15.83■□□□□ 0.12
PTPRU-205ENST00000460170 SAAL1Q96ER3 474 aa15.83■□□□□ 0.12
PTPRU-205ENST00000460170 ZHX2Q9Y6X8 837 aa15.83■□□□□ 0.12
PTPRU-205ENST00000460170 UCHL3P15374 230 aa15.83■□□□□ 0.12
PTPRU-205ENST00000460170 PSMA2P25787 234 aa15.83■□□□□ 0.12
PTPRU-205ENST00000460170 GABPAQ06546 454 aa15.83■□□□□ 0.12
PTPRU-205ENST00000460170 NLRP7Q8WX94 980 aa15.83■□□□□ 0.12
PTPRU-205ENST00000460170 VIPAS39Q9H9C1 493 aa15.83■□□□□ 0.12
PTPRU-205ENST00000460170 NUB1Q9Y5A7 615 aa15.83■□□□□ 0.12
PTPRU-205ENST00000460170 ACTN1P12814 892 aa15.82■□□□□ 0.12
PTPRU-205ENST00000460170 KLRK1P26718 216 aa15.82■□□□□ 0.12
PTPRU-205ENST00000460170 ANXA13P27216 316 aa15.82■□□□□ 0.12
PTPRU-205ENST00000460170 ARL4AP40617 200 aa15.82■□□□□ 0.12
PTPRU-205ENST00000460170 PMS2P54278 862 aa15.82■□□□□ 0.12
PTPRU-205ENST00000460170 SEC23AQ15436 765 aa15.82■□□□□ 0.12
PTPRU-205ENST00000460170 MAPK6Q16659 721 aa15.82■□□□□ 0.12
PTPRU-205ENST00000460170 SWSAP1Q6NVH7 229 aa15.82■□□□□ 0.12
PTPRU-205ENST00000460170 HIBCHQ6NVY1 386 aaPredicted RBP15.82■□□□□ 0.12
PTPRU-205ENST00000460170 PASD1Q8IV76 773 aa15.82■□□□□ 0.12
PTPRU-205ENST00000460170 RPS6KC1Q96S38 1066 aa15.82■□□□□ 0.12
PTPRU-205ENST00000460170 FBXO40Q9UH90 709 aa15.82■□□□□ 0.12
PTPRU-205ENST00000460170 MAGEA9P43362 315 aa15.82■□□□□ 0.12
PTPRU-205ENST00000460170 CCNYQ8ND76 341 aa15.82■□□□□ 0.12
PTPRU-205ENST00000460170 SCYL1Q96KG9 808 aa15.82■□□□□ 0.12
PTPRU-205ENST00000460170 FAM167AQ96KS9 214 aa15.82■□□□□ 0.12
PTPRU-205ENST00000460170 ERGIC2Q96RQ1 377 aa15.82■□□□□ 0.12
PTPRU-205ENST00000460170 SLC38A10Q9HBR0 1119 aa15.82■□□□□ 0.12
PTPRU-205ENST00000460170 PIM2Q9P1W9 311 aa15.82■□□□□ 0.12
PTPRU-205ENST00000460170 CD44P16070 742 aaKnown RBP15.82■□□□□ 0.12
PTPRU-205ENST00000460170 TRIM68Q6AZZ1 485 aa15.82■□□□□ 0.12
PTPRU-205ENST00000460170 BARGINQ6ZT62 677 aa15.82■□□□□ 0.12
PTPRU-205ENST00000460170 ATP6V1G3Q96LB4 118 aa15.82■□□□□ 0.12
PTPRU-205ENST00000460170 ELAC2Q9BQ52 826 aaKnown RBP15.82■□□□□ 0.12
PTPRU-205ENST00000460170 WNT8AQ9H1J5 351 aa15.82■□□□□ 0.12
PTPRU-205ENST00000460170 IRX4P78413 519 aa15.81■□□□□ 0.12
PTPRU-205ENST00000460170 CAV1Q03135 178 aa15.81■□□□□ 0.12
PTPRU-205ENST00000460170 ENOSF1Q7L5Y1 443 aa15.81■□□□□ 0.12
PTPRU-205ENST00000460170 WRNIP1Q96S55 665 aa15.81■□□□□ 0.12
PTPRU-205ENST00000460170 ZWILCHQ9H900 591 aa15.81■□□□□ 0.12
PTPRU-205ENST00000460170 SAYSD1Q9NPB0 183 aa15.81■□□□□ 0.12
PTPRU-205ENST00000460170 AMACRQ9UHK6 382 aa15.81■□□□□ 0.12
PTPRU-205ENST00000460170 MYOM1P52179 1685 aa15.81■□□□□ 0.12
PTPRU-205ENST00000460170 FDX1P10109 184 aa15.81■□□□□ 0.12
PTPRU-205ENST00000460170 SAT1P21673 171 aa15.81■□□□□ 0.12
PTPRU-205ENST00000460170 PPM1FP49593 454 aaPredicted RBP15.81■□□□□ 0.12
PTPRU-205ENST00000460170 FBXL13Q8NEE6 735 aa15.81■□□□□ 0.12
PTPRU-205ENST00000460170 BAG2O95816 211 aa15.81■□□□□ 0.12
PTPRU-205ENST00000460170 SESN3P58005 492 aa15.81■□□□□ 0.12
PTPRU-205ENST00000460170 PPP2R2AP63151 447 aa15.81■□□□□ 0.12
PTPRU-205ENST00000460170 IFRD2Q12894 506 aaPredicted RBP15.81■□□□□ 0.12
PTPRU-205ENST00000460170 NXNQ6DKJ4 435 aa15.81■□□□□ 0.12
PTPRU-205ENST00000460170 CCNI2Q6ZMN8 369 aaPredicted RBP15.81■□□□□ 0.12
PTPRU-205ENST00000460170 AGPAT1Q99943 283 aa15.81■□□□□ 0.12
PTPRU-205ENST00000460170 RNPC3Q96LT9 517 aaKnown RBP15.81■□□□□ 0.12
PTPRU-205ENST00000460170 STK33Q9BYT3 514 aa15.81■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms