RNA–Protein interactions for RNA: ENST00000459904.1

LMNA-209, Transcript of lamin A/C, humanhuman

TSL 2

Gene LMNA, Length 916 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-209ENST00000459904 CXCL14O95715 111 aa17.01■□□□□ 0.31
LMNA-209ENST00000459904 CIITAP33076 1130 aa17.01■□□□□ 0.31
LMNA-209ENST00000459904 KRT17Q04695 432 aa17.01■□□□□ 0.31
LMNA-209ENST00000459904 NTRK3Q16288 839 aa17.01■□□□□ 0.31
LMNA-209ENST00000459904 PDE12Q6L8Q7 609 aaKnown RBP17.01■□□□□ 0.31
LMNA-209ENST00000459904 FDXACB1Q9BRP7 624 aaPredicted RBP17.01■□□□□ 0.31
LMNA-209ENST00000459904 GBP3Q9H0R5 595 aa17.01■□□□□ 0.31
LMNA-209ENST00000459904 NRBP2Q9NSY0 501 aa17.01■□□□□ 0.31
LMNA-209ENST00000459904 SEPT9Q9UHD8 586 aaPredicted RBP17.01■□□□□ 0.31
LMNA-209ENST00000459904 INPP5FQ9Y2H2 1132 aa17.01■□□□□ 0.31
LMNA-209ENST00000459904 PTPRZ1P23471 2315 aaPredicted RBP17.01■□□□□ 0.31
LMNA-209ENST00000459904 GAS7O60861 476 aa17■□□□□ 0.31
LMNA-209ENST00000459904 STBD1O95210 358 aa17■□□□□ 0.31
LMNA-209ENST00000459904 MYBP10242 640 aa17■□□□□ 0.31
LMNA-209ENST00000459904 TBC1D8BQ0IIM8 1120 aa17■□□□□ 0.31
LMNA-209ENST00000459904 SMC1AQ14683 1233 aaKnown RBP17■□□□□ 0.31
LMNA-209ENST00000459904 LRCH2Q5VUJ6 765 aa17■□□□□ 0.31
LMNA-209ENST00000459904 VPS52Q8N1B4 723 aa17■□□□□ 0.31
LMNA-209ENST00000459904 MRPL43Q8N983 215 aaKnown RBP17■□□□□ 0.31
LMNA-209ENST00000459904 FAM167AQ96KS9 214 aa17■□□□□ 0.31
LMNA-209ENST00000459904 AIFM3Q96NN9 605 aa17■□□□□ 0.31
LMNA-209ENST00000459904 CEP89Q96ST8 783 aa17■□□□□ 0.31
LMNA-209ENST00000459904 NGRNQ9NPE2 291 aaKnown RBP17■□□□□ 0.31
LMNA-209ENST00000459904 DNAJB4Q9UDY4 337 aa17■□□□□ 0.31
LMNA-209ENST00000459904 CEP131Q9UPN4 1083 aa17■□□□□ 0.31
LMNA-209ENST00000459904 A0A0U1RQF3 1178 aa16.99■□□□□ 0.31
LMNA-209ENST00000459904 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP16.99■□□□□ 0.31
LMNA-209ENST00000459904 CDC45O75419 566 aa16.99■□□□□ 0.31
LMNA-209ENST00000459904 SSBP05455 408 aaKnown RBP eCLIP16.99■□□□□ 0.31
LMNA-209ENST00000459904 TMOD1P28289 359 aa16.99■□□□□ 0.31
LMNA-209ENST00000459904 AFF1P51825 1210 aaKnown RBP16.99■□□□□ 0.31
LMNA-209ENST00000459904 KRT32Q14532 448 aa16.99■□□□□ 0.31
LMNA-209ENST00000459904 TARBP2Q15633 366 aaKnown RBP16.99■□□□□ 0.31
LMNA-209ENST00000459904 PLA2G4FQ68DD2 849 aa16.99■□□□□ 0.31
LMNA-209ENST00000459904 MIER3Q7Z3K6 550 aa16.99■□□□□ 0.31
LMNA-209ENST00000459904 ZNF579Q8NAF0 562 aaKnown RBP16.99■□□□□ 0.31
LMNA-209ENST00000459904 TBCKQ8TEA7 893 aa16.99■□□□□ 0.31
LMNA-209ENST00000459904 CASP10Q92851 521 aa16.99■□□□□ 0.31
LMNA-209ENST00000459904 ATOH1Q92858 354 aaPredicted RBP16.99■□□□□ 0.31
LMNA-209ENST00000459904 SLC5A5Q92911 643 aa16.99■□□□□ 0.31
LMNA-209ENST00000459904 RIPOR3Q96MK2 946 aa16.99■□□□□ 0.31
LMNA-209ENST00000459904 VN1R3Q9BXE9 311 aa16.99■□□□□ 0.31
LMNA-209ENST00000459904 TEKT3Q9BXF9 490 aa16.99■□□□□ 0.31
LMNA-209ENST00000459904 NRDE2Q9H7Z3 1164 aa16.99■□□□□ 0.31
LMNA-209ENST00000459904 BMP2KQ9NSY1 1161 aaPredicted RBP16.99■□□□□ 0.31
LMNA-209ENST00000459904 RNF216Q9NWF9 866 aaPredicted RBP16.99■□□□□ 0.31
LMNA-209ENST00000459904 LIMD1Q9UGP4 676 aa16.99■□□□□ 0.31
LMNA-209ENST00000459904 DOCK8Q8NF50 2099 aa16.98■□□□□ 0.31
LMNA-209ENST00000459904 MTCL1Q9Y4B5 1905 aaKnown RBP16.98■□□□□ 0.31
LMNA-209ENST00000459904 DDX11L8A8MPP1 907 aa16.98■□□□□ 0.31
LMNA-209ENST00000459904 HOXA2O43364 376 aa16.98■□□□□ 0.31
LMNA-209ENST00000459904 SRGAP2BP0DMP2 458 aa16.98■□□□□ 0.31
LMNA-209ENST00000459904 NLRP5P59047 1200 aa16.98■□□□□ 0.31
LMNA-209ENST00000459904 AKAP17AQ02040 695 aaKnown RBP16.98■□□□□ 0.31
LMNA-209ENST00000459904 ERICH6BQ5W0A0 696 aa16.98■□□□□ 0.31
LMNA-209ENST00000459904 BLOC1S2Q6QNY1 142 aa16.98■□□□□ 0.31
LMNA-209ENST00000459904 TMEM105Q8N8V8 129 aa16.98■□□□□ 0.31
LMNA-209ENST00000459904 ZBP1Q9H171 429 aa16.98■□□□□ 0.31
LMNA-209ENST00000459904 RIF1Q5UIP0 2472 aaKnown RBP16.97■□□□□ 0.31
LMNA-209ENST00000459904 GFRA3O60609 400 aa16.97■□□□□ 0.31
LMNA-209ENST00000459904 PSMD10O75832 226 aa16.97■□□□□ 0.31
LMNA-209ENST00000459904 RPS6KB1P23443 525 aa16.97■□□□□ 0.31
LMNA-209ENST00000459904 GNA11P29992 359 aa16.97■□□□□ 0.31
LMNA-209ENST00000459904 PPM1AP35813 382 aa16.97■□□□□ 0.31
LMNA-209ENST00000459904 PHKA2P46019 1235 aa16.97■□□□□ 0.31
LMNA-209ENST00000459904 TWF2Q6IBS0 349 aaKnown RBP16.97■□□□□ 0.31
LMNA-209ENST00000459904 TMC5Q6UXY8 1006 aa16.97■□□□□ 0.31
LMNA-209ENST00000459904 ZNF280BQ86YH2 543 aa16.97■□□□□ 0.31
LMNA-209ENST00000459904 RHPN2Q8IUC4 686 aa16.97■□□□□ 0.31
LMNA-209ENST00000459904 CCDC12Q8WUD4 166 aaPredicted RBP16.97■□□□□ 0.31
LMNA-209ENST00000459904 NLRP4Q96MN2 994 aa16.97■□□□□ 0.31
LMNA-209ENST00000459904 ADAM7Q9H2U9 754 aa16.97■□□□□ 0.31
LMNA-209ENST00000459904 PIN4Q9Y237 131 aaKnown RBP16.97■□□□□ 0.31
LMNA-209ENST00000459904 GTF3C3Q9Y5Q9 886 aa16.97■□□□□ 0.31
LMNA-209ENST00000459904 CCDC196A0A1B0GTZ2 297 aa16.96■□□□□ 0.31
LMNA-209ENST00000459904 EML1O00423 815 aa16.96■□□□□ 0.31
LMNA-209ENST00000459904 HOXB8P17481 243 aaPredicted RBP16.96■□□□□ 0.31
LMNA-209ENST00000459904 PDIA3P30101 505 aaKnown RBP16.96■□□□□ 0.31
LMNA-209ENST00000459904 SLC11A1P49279 550 aa16.96■□□□□ 0.31
LMNA-209ENST00000459904 ALDH7A1P49419 539 aaKnown RBP16.96■□□□□ 0.31
LMNA-209ENST00000459904 RCAN1P53805 252 aa16.96■□□□□ 0.31
LMNA-209ENST00000459904 NPEPPSP55786 919 aa16.96■□□□□ 0.31
LMNA-209ENST00000459904 TPRNQ4KMQ1 711 aa16.96■□□□□ 0.31
LMNA-209ENST00000459904 CES5AQ6NT32 575 aa16.96■□□□□ 0.31
LMNA-209ENST00000459904 TEX2Q8IWB9 1127 aa16.96■□□□□ 0.31
LMNA-209ENST00000459904 KCNB2Q92953 911 aa16.96■□□□□ 0.31
LMNA-209ENST00000459904 TMEM169Q96HH4 297 aa16.96■□□□□ 0.31
LMNA-209ENST00000459904 GCOM2Q9BZD3 368 aaPredicted RBP16.96■□□□□ 0.31
LMNA-209ENST00000459904 TBC1D13Q9NVG8 400 aa16.96■□□□□ 0.31
LMNA-209ENST00000459904 SUCLA2Q9P2R7 463 aaPredicted RBP16.96■□□□□ 0.31
LMNA-209ENST00000459904 NID2Q14112 1375 aa16.96■□□□□ 0.31
LMNA-209ENST00000459904 FAM186AA6NE01 2351 aa16.96■□□□□ 0.31
LMNA-209ENST00000459904 EOMESO95936 686 aa16.95■□□□□ 0.3
LMNA-209ENST00000459904 GALTP07902 379 aa16.95■□□□□ 0.3
LMNA-209ENST00000459904 HMGB1P09429 215 aaKnown RBP16.95■□□□□ 0.3
LMNA-209ENST00000459904 HSPA4P34932 840 aa16.95■□□□□ 0.3
LMNA-209ENST00000459904 STK3Q13188 491 aa16.95■□□□□ 0.3
LMNA-209ENST00000459904 SLC22A17Q8WUG5 538 aa16.95■□□□□ 0.3
LMNA-209ENST00000459904 IGSF21Q96ID5 467 aa16.95■□□□□ 0.3
LMNA-209ENST00000459904 RIT2Q99578 217 aa16.95■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms