RNA–Protein interactions for RNA: ENST00000458748.1

SCARNA2-201, small Cajal body-specific RNA 2, humanhuman

BASIC

Gene SCARNA2, Length 420 nt, Biotype scaRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA2-201ENST00000458748 COL4A3BPQ9Y5P4 624 aa19.55■□□□□ 0.72
SCARNA2-201ENST00000458748 KIAA1671Q9BY89 1806 aa19.54■□□□□ 0.72
SCARNA2-201ENST00000458748 DGAT1O75907 488 aa19.54■□□□□ 0.72
SCARNA2-201ENST00000458748 IBSPP21815 317 aaPredicted RBP19.54■□□□□ 0.72
SCARNA2-201ENST00000458748 TECP42680 631 aa19.54■□□□□ 0.72
SCARNA2-201ENST00000458748 MXD4Q14582 209 aaPredicted RBP19.54■□□□□ 0.72
SCARNA2-201ENST00000458748 EMC2Q15006 297 aa19.54■□□□□ 0.72
SCARNA2-201ENST00000458748 RILPL1Q5EBL4 403 aa19.54■□□□□ 0.72
SCARNA2-201ENST00000458748 P2RX5Q93086 422 aa19.54■□□□□ 0.72
SCARNA2-201ENST00000458748 NLRP4Q96MN2 994 aa19.54■□□□□ 0.72
SCARNA2-201ENST00000458748 MTRQ99707 1265 aa19.54■□□□□ 0.72
SCARNA2-201ENST00000458748 TMEM60Q9H2L4 133 aa19.54■□□□□ 0.72
SCARNA2-201ENST00000458748 AAASQ9NRG9 546 aa19.54■□□□□ 0.72
SCARNA2-201ENST00000458748 WRAP73Q9P2S5 460 aaPredicted RBP19.54■□□□□ 0.72
SCARNA2-201ENST00000458748 A0A087WZ62 844 aa19.53■□□□□ 0.72
SCARNA2-201ENST00000458748 POTEMA6NI47 508 aa19.53■□□□□ 0.72
SCARNA2-201ENST00000458748 WNT7AO00755 349 aa19.53■□□□□ 0.72
SCARNA2-201ENST00000458748 SKIP12755 728 aa19.53■□□□□ 0.72
SCARNA2-201ENST00000458748 DRP2Q13474 957 aa19.53■□□□□ 0.72
SCARNA2-201ENST00000458748 ABI1Q8IZP0 508 aa19.53■□□□□ 0.72
SCARNA2-201ENST00000458748 PRPF31Q8WWY3 499 aaKnown RBP19.53■□□□□ 0.72
SCARNA2-201ENST00000458748 RSPH1Q8WYR4 309 aa19.53■□□□□ 0.72
SCARNA2-201ENST00000458748 ZNF668Q96K58 619 aaPredicted RBP19.53■□□□□ 0.72
SCARNA2-201ENST00000458748 NACC1Q96RE7 527 aa19.53■□□□□ 0.72
SCARNA2-201ENST00000458748 FDXACB1Q9BRP7 624 aaPredicted RBP19.53■□□□□ 0.72
SCARNA2-201ENST00000458748 POLR3CQ9BUI4 534 aaPredicted RBP19.53■□□□□ 0.72
SCARNA2-201ENST00000458748 MRPL42Q9Y6G3 142 aaKnown RBP19.53■□□□□ 0.72
SCARNA2-201ENST00000458748 BRWD1Q9NSI6 2320 aa19.52■□□□□ 0.72
SCARNA2-201ENST00000458748 CD2BP2O95400 341 aaKnown RBP19.52■□□□□ 0.72
SCARNA2-201ENST00000458748 MUTP22033 750 aa19.52■□□□□ 0.72
SCARNA2-201ENST00000458748 TFDP1Q14186 410 aa19.52■□□□□ 0.72
SCARNA2-201ENST00000458748 PCBP1Q15365 356 aaKnown RBP eCLIP19.52■□□□□ 0.72not detected■□□□□ 8.8
SCARNA2-201ENST00000458748 LARP1BQ659C4 914 aaKnown RBP19.52■□□□□ 0.72
SCARNA2-201ENST00000458748 CATSPER4Q7RTX7 472 aa19.52■□□□□ 0.72
SCARNA2-201ENST00000458748 SRGAP1Q7Z6B7 1085 aa19.52■□□□□ 0.72
SCARNA2-201ENST00000458748 TMEM143Q96AN5 459 aa19.52■□□□□ 0.72
SCARNA2-201ENST00000458748 ARID2Q68CP9 1835 aa19.52■□□□□ 0.72
SCARNA2-201ENST00000458748 EOMESO95936 686 aa19.51■□□□□ 0.71
SCARNA2-201ENST00000458748 SRGAP2CP0DJJ0 459 aa19.51■□□□□ 0.71
SCARNA2-201ENST00000458748 PDCP20941 246 aa19.51■□□□□ 0.71
SCARNA2-201ENST00000458748 PHKA2P46019 1235 aa19.51■□□□□ 0.71
SCARNA2-201ENST00000458748 FXR2P51116 673 aaKnown RBP eCLIP19.51■□□□□ 0.71
SCARNA2-201ENST00000458748 NCBP1Q09161 790 aaKnown RBP19.51■□□□□ 0.71
SCARNA2-201ENST00000458748 LAMTOR4Q0VGL1 99 aa19.51■□□□□ 0.71
SCARNA2-201ENST00000458748 CSPP1Q1MSJ5 1256 aa19.51■□□□□ 0.71
SCARNA2-201ENST00000458748 SPOUT1Q5T280 376 aaKnown RBP19.51■□□□□ 0.71
SCARNA2-201ENST00000458748 NSUN3Q9H649 340 aaKnown RBP19.51■□□□□ 0.71
SCARNA2-201ENST00000458748 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP19.5■□□□□ 0.71
SCARNA2-201ENST00000458748 A0A0U1RQF3 1178 aa19.5■□□□□ 0.71
SCARNA2-201ENST00000458748 TBKBP1A7MCY6 615 aa19.5■□□□□ 0.71
SCARNA2-201ENST00000458748 RPA1P27694 616 aa19.5■□□□□ 0.71
SCARNA2-201ENST00000458748 RARRES1P49788 294 aa19.5■□□□□ 0.71
SCARNA2-201ENST00000458748 RAB27AP51159 221 aa19.5■□□□□ 0.71
SCARNA2-201ENST00000458748 PTGDRQ13258 359 aa19.5■□□□□ 0.71
SCARNA2-201ENST00000458748 PDIA5Q14554 519 aa19.5■□□□□ 0.71
SCARNA2-201ENST00000458748 PAN2Q504Q3 1202 aaKnown RBP19.5■□□□□ 0.71
SCARNA2-201ENST00000458748 FERMT3Q86UX7 667 aa19.5■□□□□ 0.71
SCARNA2-201ENST00000458748 CATSPER3Q86XQ3 398 aa19.5■□□□□ 0.71
SCARNA2-201ENST00000458748 ZNF579Q8NAF0 562 aaKnown RBP19.5■□□□□ 0.71
SCARNA2-201ENST00000458748 MCPH1Q8NEM0 835 aa19.5■□□□□ 0.71
SCARNA2-201ENST00000458748 TMEM117Q9H0C3 514 aa19.5■□□□□ 0.71
SCARNA2-201ENST00000458748 LRWD1Q9UFC0 647 aa19.5■□□□□ 0.71
SCARNA2-201ENST00000458748 DBR1Q9UK59 544 aaKnown RBP19.5■□□□□ 0.71
SCARNA2-201ENST00000458748 PLAGL2Q9UPG8 496 aa19.5■□□□□ 0.71
SCARNA2-201ENST00000458748 PIN4Q9Y237 131 aaKnown RBP19.5■□□□□ 0.71
SCARNA2-201ENST00000458748 PCDHB12Q9Y5F1 795 aa19.5■□□□□ 0.71
SCARNA2-201ENST00000458748 GTF3C3Q9Y5Q9 886 aa19.5■□□□□ 0.71
SCARNA2-201ENST00000458748 ATG2AQ2TAZ0 1938 aa19.49■□□□□ 0.71
SCARNA2-201ENST00000458748 BDP1A6H8Y1 2624 aa19.49■□□□□ 0.71
SCARNA2-201ENST00000458748 GRM6O15303 877 aa19.49■□□□□ 0.71
SCARNA2-201ENST00000458748 NCK2O43639 380 aa19.49■□□□□ 0.71
SCARNA2-201ENST00000458748 PRPHP41219 470 aa19.49■□□□□ 0.71
SCARNA2-201ENST00000458748 FAM102BQ5T8I3 360 aa19.49■□□□□ 0.71
SCARNA2-201ENST00000458748 TWF2Q6IBS0 349 aaKnown RBP19.49■□□□□ 0.71
SCARNA2-201ENST00000458748 DTHD1Q6ZMT9 781 aa19.49■□□□□ 0.71
SCARNA2-201ENST00000458748 ECHDC2Q86YB7 292 aa19.49■□□□□ 0.71
SCARNA2-201ENST00000458748 KSR1Q8IVT5 923 aa19.49■□□□□ 0.71
SCARNA2-201ENST00000458748 PIGOQ8TEQ8 1089 aa19.49■□□□□ 0.71
SCARNA2-201ENST00000458748 TRAIPQ9BWF2 469 aa19.49■□□□□ 0.71
SCARNA2-201ENST00000458748 BMP2KQ9NSY1 1161 aaPredicted RBP19.49■□□□□ 0.71
SCARNA2-201ENST00000458748 CARNS1A5YM72 827 aa19.48■□□□□ 0.71
SCARNA2-201ENST00000458748 ZBTB39O15060 712 aa19.48■□□□□ 0.71
SCARNA2-201ENST00000458748 ERLIN2O94905 339 aa19.48■□□□□ 0.71
SCARNA2-201ENST00000458748 SPATA31C1P0DKV0 1188 aa19.48■□□□□ 0.71
SCARNA2-201ENST00000458748 FGFR4P22455 802 aa19.48■□□□□ 0.71
SCARNA2-201ENST00000458748 CCT6AP40227 531 aaKnown RBP19.48■□□□□ 0.71
SCARNA2-201ENST00000458748 GATMP50440 423 aa19.48■□□□□ 0.71
SCARNA2-201ENST00000458748 POU5F1BQ06416 359 aa19.48■□□□□ 0.71
SCARNA2-201ENST00000458748 RNF149Q8NC42 400 aa19.48■□□□□ 0.71
SCARNA2-201ENST00000458748 RNF169Q8NCN4 708 aa19.48■□□□□ 0.71
SCARNA2-201ENST00000458748 PPP2R3CQ969Q6 453 aa19.48■□□□□ 0.71
SCARNA2-201ENST00000458748 UBE2ZQ9H832 354 aaPredicted RBP19.48■□□□□ 0.71
SCARNA2-201ENST00000458748 IFT122Q9HBG6 1241 aa19.48■□□□□ 0.71
SCARNA2-201ENST00000458748 PCDHB6Q9Y5E3 794 aa19.48■□□□□ 0.71
SCARNA2-201ENST00000458748 MUC3AQ02505 3323 aa19.48■□□□□ 0.71
SCARNA2-201ENST00000458748 ARHGEF35A5YM69 484 aa19.47■□□□□ 0.71
SCARNA2-201ENST00000458748 MED24O75448 989 aa19.47■□□□□ 0.71
SCARNA2-201ENST00000458748 CSDE1O75534 798 aaKnown RBP19.47■□□□□ 0.71
SCARNA2-201ENST00000458748 TOB1P50616 345 aaPredicted RBP19.47■□□□□ 0.71
SCARNA2-201ENST00000458748 NBR1Q14596 966 aa19.47■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms