RNA–Protein interactions for RNA: ENST00000458707.1

VPS50-208, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 2

Gene VPS50, Length 1,898 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-208ENST00000458707 CLUL1Q15846 466 aa9.21□□□□□ -0.93
VPS50-208ENST00000458707 MOXD1Q6UVY6 613 aa9.21□□□□□ -0.93
VPS50-208ENST00000458707 CPLX4Q7Z7G2 160 aa9.21□□□□□ -0.93
VPS50-208ENST00000458707 DAAM2Q86T65 1068 aa9.21□□□□□ -0.93
VPS50-208ENST00000458707 HVCN1Q96D96 273 aa9.21□□□□□ -0.93
VPS50-208ENST00000458707 FAXDC2Q96IV6 333 aa9.21□□□□□ -0.93
VPS50-208ENST00000458707 SETDB2Q96T68 719 aa9.21□□□□□ -0.93
VPS50-208ENST00000458707 CELF4Q9BZC1 486 aaKnown RBP9.21□□□□□ -0.93
VPS50-208ENST00000458707 CARD9Q9H257 536 aa9.21□□□□□ -0.93
VPS50-208ENST00000458707 CCDC134Q9H6E4 229 aa9.21□□□□□ -0.93
VPS50-208ENST00000458707 HAUS2Q9NVX0 235 aa9.21□□□□□ -0.93
VPS50-208ENST00000458707 AJAP1Q9UKB5 411 aaPredicted RBP9.21□□□□□ -0.93
VPS50-208ENST00000458707 AMFRQ9UKV5 643 aa9.21□□□□□ -0.93
VPS50-208ENST00000458707 TPX2Q9ULW0 747 aaKnown RBP9.21□□□□□ -0.93
VPS50-208ENST00000458707 STK24Q9Y6E0 443 aa9.21□□□□□ -0.93
VPS50-208ENST00000458707 GAKO14976 1311 aa9.21□□□□□ -0.93
VPS50-208ENST00000458707 LRRC37AA6NMS7 1700 aa9.21□□□□□ -0.93
VPS50-208ENST00000458707 LY75O60449 1722 aa9.21□□□□□ -0.94
VPS50-208ENST00000458707 FAM187AA6NFU0 413 aa9.21□□□□□ -0.94
VPS50-208ENST00000458707 CCT8L1PA6NM43 557 aa9.21□□□□□ -0.94
VPS50-208ENST00000458707 CALUO43852 315 aaPredicted RBP9.21□□□□□ -0.94
VPS50-208ENST00000458707 MED24O75448 989 aa9.21□□□□□ -0.94
VPS50-208ENST00000458707 TMEM253P0C7T8 217 aa9.21□□□□□ -0.94
VPS50-208ENST00000458707 SLC8A1P32418 973 aa9.21□□□□□ -0.94
VPS50-208ENST00000458707 ELF1P32519 619 aa9.21□□□□□ -0.94
VPS50-208ENST00000458707 GALCP54803 685 aa9.21□□□□□ -0.94
VPS50-208ENST00000458707 GABPAQ06546 454 aa9.21□□□□□ -0.94
VPS50-208ENST00000458707 KLRC3Q07444 240 aa9.21□□□□□ -0.94
VPS50-208ENST00000458707 DHX34Q14147 1143 aaKnown RBP9.21□□□□□ -0.94
VPS50-208ENST00000458707 ITIH4Q14624 930 aa9.21□□□□□ -0.94
VPS50-208ENST00000458707 DCAF12L1Q5VU92 463 aa9.21□□□□□ -0.94
VPS50-208ENST00000458707 TPTE2Q6XPS3 522 aa9.21□□□□□ -0.94
VPS50-208ENST00000458707 ARMCX6Q7L4S7 300 aa9.21□□□□□ -0.94
VPS50-208ENST00000458707 PIGWQ7Z7B1 504 aa9.21□□□□□ -0.94
VPS50-208ENST00000458707 ADGRF4Q8IZF3 695 aa9.21□□□□□ -0.94
VPS50-208ENST00000458707 SDR16C5Q8N3Y7 309 aa9.21□□□□□ -0.94
VPS50-208ENST00000458707 PROCA1Q8NCQ7 364 aaPredicted RBP9.21□□□□□ -0.94
VPS50-208ENST00000458707 GIMAP7Q8NHV1 300 aa9.21□□□□□ -0.94
VPS50-208ENST00000458707 ATXN2LQ8WWM7 1075 aaKnown RBP9.21□□□□□ -0.94
VPS50-208ENST00000458707 GJA10Q969M2 543 aa9.21□□□□□ -0.94
VPS50-208ENST00000458707 SLC35C1Q96A29 364 aa9.21□□□□□ -0.94
VPS50-208ENST00000458707 C8orf37Q96NL8 207 aa9.21□□□□□ -0.94
VPS50-208ENST00000458707 NAP1L3Q99457 506 aaPredicted RBP9.21□□□□□ -0.94
VPS50-208ENST00000458707 ERP44Q9BS26 406 aa9.21□□□□□ -0.94
VPS50-208ENST00000458707 SYT11Q9BT88 431 aa9.21□□□□□ -0.94
VPS50-208ENST00000458707 GLT8D2Q9H1C3 349 aa9.21□□□□□ -0.94
VPS50-208ENST00000458707 PABPC3Q9H361 631 aaKnown RBP9.21□□□□□ -0.94
VPS50-208ENST00000458707 LRRC4CQ9HCJ2 640 aa9.21□□□□□ -0.94
VPS50-208ENST00000458707 TYW1Q9NV66 732 aaKnown RBP9.21□□□□□ -0.94
VPS50-208ENST00000458707 SLTMQ9NWH9 1034 aaKnown RBP eCLIP9.21□□□□□ -0.94
VPS50-208ENST00000458707 NUB1Q9Y5A7 615 aa9.21□□□□□ -0.94
VPS50-208ENST00000458707 PHF20L1A8MW92 1017 aa9.2□□□□□ -0.94
VPS50-208ENST00000458707 ZBTB5O15062 677 aa9.2□□□□□ -0.94
VPS50-208ENST00000458707 MARCH6O60337 910 aa9.2□□□□□ -0.94
VPS50-208ENST00000458707 CAND2O75155 1236 aa9.2□□□□□ -0.94
VPS50-208ENST00000458707 AKAP3O75969 853 aa9.2□□□□□ -0.94
VPS50-208ENST00000458707 TRIM37O94972 964 aa9.2□□□□□ -0.94
VPS50-208ENST00000458707 FGGP02679 453 aa9.2□□□□□ -0.94
VPS50-208ENST00000458707 NUDT7P0C024 238 aa9.2□□□□□ -0.94
VPS50-208ENST00000458707 LMNB1P20700 586 aa9.2□□□□□ -0.94
VPS50-208ENST00000458707 MAGEA8P43361 318 aa9.2□□□□□ -0.94
VPS50-208ENST00000458707 SPIRE1Q08AE8 756 aa9.2□□□□□ -0.94
VPS50-208ENST00000458707 TRAF1Q13077 416 aa9.2□□□□□ -0.94
VPS50-208ENST00000458707 MYBPC2Q14324 1141 aa9.2□□□□□ -0.94
VPS50-208ENST00000458707 PLS1Q14651 629 aa9.2□□□□□ -0.94
VPS50-208ENST00000458707 DEFB132Q7Z7B7 95 aa9.2□□□□□ -0.94
VPS50-208ENST00000458707 CROCCP2Q86T23 111 aa9.2□□□□□ -0.94
VPS50-208ENST00000458707 DNAAF5Q86Y56 855 aa9.2□□□□□ -0.94
VPS50-208ENST00000458707 SLFN12Q8IYM2 578 aa9.2□□□□□ -0.94
VPS50-208ENST00000458707 SYT2Q8N9I0 419 aaPredicted RBP9.2□□□□□ -0.94
VPS50-208ENST00000458707 CCDC197Q8NCU1 140 aa9.2□□□□□ -0.94
VPS50-208ENST00000458707 LNX1Q8TBB1 728 aaPredicted RBP9.2□□□□□ -0.94
VPS50-208ENST00000458707 CRYGNQ8WXF5 182 aa9.2□□□□□ -0.94
VPS50-208ENST00000458707 RFFLQ8WZ73 363 aa9.2□□□□□ -0.94
VPS50-208ENST00000458707 TRIM51Q9BSJ1 452 aa9.2□□□□□ -0.94
VPS50-208ENST00000458707 TMEM109Q9BVC6 243 aa9.2□□□□□ -0.94
VPS50-208ENST00000458707 DPH5Q9H2P9 285 aa9.2□□□□□ -0.94
VPS50-208ENST00000458707 ADAM7Q9H2U9 754 aa9.2□□□□□ -0.94
VPS50-208ENST00000458707 GCNT4Q9P109 453 aa9.2□□□□□ -0.94
VPS50-208ENST00000458707 ANKIB1Q9P2G1 1089 aa9.2□□□□□ -0.94
VPS50-208ENST00000458707 ODF2LQ9ULJ1 636 aa9.2□□□□□ -0.94
VPS50-208ENST00000458707 SLC12A4Q9UP95 1085 aa9.2□□□□□ -0.94
VPS50-208ENST00000458707 PCDHGA4Q9Y5G9 962 aa9.2□□□□□ -0.94
VPS50-208ENST00000458707 ASTN1O14525 1302 aa9.2□□□□□ -0.94
VPS50-208ENST00000458707 MYO3BQ8WXR4 1341 aa9.2□□□□□ -0.94
VPS50-208ENST00000458707 CCDC169A6NNP5 214 aa9.19□□□□□ -0.94
VPS50-208ENST00000458707 BUB1BO60566 1050 aaPredicted RBP9.19□□□□□ -0.94
VPS50-208ENST00000458707 CTNND1O60716 968 aaKnown RBP9.19□□□□□ -0.94
VPS50-208ENST00000458707 TTLL1O95922 423 aa9.19□□□□□ -0.94
VPS50-208ENST00000458707 NR3C1P04150 777 aa9.19□□□□□ -0.94
VPS50-208ENST00000458707 KRT18P05783 430 aaKnown RBP9.19□□□□□ -0.94
VPS50-208ENST00000458707 IL1R1P14778 569 aa9.19□□□□□ -0.94
VPS50-208ENST00000458707 CHN1P15882 459 aa9.19□□□□□ -0.94
VPS50-208ENST00000458707 RPL13P26373 211 aaKnown RBP9.19□□□□□ -0.94
VPS50-208ENST00000458707 STAT1P42224 750 aa9.19□□□□□ -0.94
VPS50-208ENST00000458707 HADHBP55084 474 aaKnown RBP9.19□□□□□ -0.94
VPS50-208ENST00000458707 ELF3P78545 371 aaPredicted RBP9.19□□□□□ -0.94
VPS50-208ENST00000458707 DR1Q01658 176 aa9.19□□□□□ -0.94
VPS50-208ENST00000458707 RIPK1Q13546 671 aa9.19□□□□□ -0.94
VPS50-208ENST00000458707 GRAPQ13588 217 aa9.19□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms