RNA–Protein interactions for RNA: ENST00000456312.5

SBDSP1-205, Transcript of SBDS, ribosome maturation factor pseudogene 1, humanhuman

TSL 5

Gene SBDSP1, Length 963 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SBDSP1-205ENST00000456312 CDCA2Q69YH5 1023 aaPredicted RBP20.67■□□□□ 0.9
SBDSP1-205ENST00000456312 MAEAQ7L5Y9 396 aa20.67■□□□□ 0.9
SBDSP1-205ENST00000456312 DEFB128Q7Z7B8 93 aa20.67■□□□□ 0.9
SBDSP1-205ENST00000456312 FAM228AQ86W67 206 aa20.67■□□□□ 0.9
SBDSP1-205ENST00000456312 GPBP1Q86WP2 473 aa20.67■□□□□ 0.9
SBDSP1-205ENST00000456312 USP38Q8NB14 1042 aa20.67■□□□□ 0.9
SBDSP1-205ENST00000456312 RASSF8Q8NHQ8 419 aa20.67■□□□□ 0.9
SBDSP1-205ENST00000456312 DNAJC19Q96DA6 116 aa20.67■□□□□ 0.9
SBDSP1-205ENST00000456312 POLD4Q9HCU8 107 aa20.67■□□□□ 0.9
SBDSP1-205ENST00000456312 ERVK-5Q9HDB9 667 aa20.67■□□□□ 0.9
SBDSP1-205ENST00000456312 ADGRA3Q8IWK6 1321 aa20.67■□□□□ 0.9
SBDSP1-205ENST00000456312 NPHP3-ACAD11A0A0J9YXS1 232 aa20.66■□□□□ 0.9
SBDSP1-205ENST00000456312 MYMKA6NI61 221 aa20.66■□□□□ 0.9
SBDSP1-205ENST00000456312 M0QZ92 97 aa20.66■□□□□ 0.9
SBDSP1-205ENST00000456312 PTENP60484 403 aa20.66■□□□□ 0.9
SBDSP1-205ENST00000456312 C9orf50Q5SZB4 431 aa20.66■□□□□ 0.9
SBDSP1-205ENST00000456312 FAM102BQ5T8I3 360 aa20.66■□□□□ 0.9
SBDSP1-205ENST00000456312 ZNF365Q70YC5 407 aa20.66■□□□□ 0.9
SBDSP1-205ENST00000456312 RPUSD2Q8IZ73 545 aaKnown RBP20.66■□□□□ 0.9
SBDSP1-205ENST00000456312 IQUBQ8NA54 791 aa20.66■□□□□ 0.9
SBDSP1-205ENST00000456312 ENGASEQ8NFI3 743 aa20.66■□□□□ 0.9
SBDSP1-205ENST00000456312 DBF4BQ8NFT6 615 aa20.66■□□□□ 0.9
SBDSP1-205ENST00000456312 MRPS27Q92552 414 aaKnown RBP20.66■□□□□ 0.9
SBDSP1-205ENST00000456312 KIFAP3Q92845 792 aa20.66■□□□□ 0.9
SBDSP1-205ENST00000456312 KCNN1Q92952 543 aa20.66■□□□□ 0.9
SBDSP1-205ENST00000456312 DHX58Q96C10 678 aa20.66■□□□□ 0.9
SBDSP1-205ENST00000456312 NLRP4Q96MN2 994 aa20.66■□□□□ 0.9
SBDSP1-205ENST00000456312 REEP2Q9BRK0 252 aa20.66■□□□□ 0.9
SBDSP1-205ENST00000456312 TNMDQ9H2S6 317 aa20.66■□□□□ 0.9
SBDSP1-205ENST00000456312 MINDY3Q9H8M7 445 aa20.66■□□□□ 0.9
SBDSP1-205ENST00000456312 ODF2LQ9ULJ1 636 aa20.66■□□□□ 0.9
SBDSP1-205ENST00000456312 COL4A6Q14031 1691 aa20.66■□□□□ 0.9
SBDSP1-205ENST00000456312 FNDC1Q4ZHG4 1894 aaPredicted RBP20.65■□□□□ 0.9
SBDSP1-205ENST00000456312 SSBP05455 408 aaKnown RBP eCLIP20.65■□□□□ 0.9
SBDSP1-205ENST00000456312 CD52P31358 61 aa20.65■□□□□ 0.9
SBDSP1-205ENST00000456312 NAMPTP43490 491 aa20.65■□□□□ 0.9
SBDSP1-205ENST00000456312 CNNM4Q6P4Q7 775 aa20.65■□□□□ 0.9
SBDSP1-205ENST00000456312 CNKSR3Q6P9H4 555 aa20.65■□□□□ 0.9
SBDSP1-205ENST00000456312 PSRC1Q6PGN9 363 aaPredicted RBP20.65■□□□□ 0.9
SBDSP1-205ENST00000456312 FSIP1Q8NA03 581 aa20.65■□□□□ 0.9
SBDSP1-205ENST00000456312 RNF149Q8NC42 400 aa20.65■□□□□ 0.9
SBDSP1-205ENST00000456312 LINC01599Q8WXQ3 324 aa20.65■□□□□ 0.9
SBDSP1-205ENST00000456312 HERVK_113Q902F9 699 aa20.65■□□□□ 0.9
SBDSP1-205ENST00000456312 FIZ1Q96SL8 496 aa20.65■□□□□ 0.9
SBDSP1-205ENST00000456312 IFIH1Q9BYX4 1025 aaKnown RBP20.65■□□□□ 0.9
SBDSP1-205ENST00000456312 TMX1Q9H3N1 280 aa20.65■□□□□ 0.9
SBDSP1-205ENST00000456312 MAGEF1Q9HAY2 307 aa20.65■□□□□ 0.9
SBDSP1-205ENST00000456312 PADI3Q9ULW8 664 aa20.65■□□□□ 0.9
SBDSP1-205ENST00000456312 GINS2Q9Y248 185 aa20.65■□□□□ 0.9
SBDSP1-205ENST00000456312 FRMD3A2A2Y4 597 aa20.64■□□□□ 0.89
SBDSP1-205ENST00000456312 GADD45BO75293 160 aaPredicted RBP20.64■□□□□ 0.89
SBDSP1-205ENST00000456312 CACNB1Q02641 598 aaPredicted RBP20.64■□□□□ 0.89
SBDSP1-205ENST00000456312 SNW1Q13573 536 aaKnown RBP20.64■□□□□ 0.89
SBDSP1-205ENST00000456312 DHX8Q14562 1220 aaKnown RBP20.64■□□□□ 0.89
SBDSP1-205ENST00000456312 AMHR2Q16671 573 aa20.64■□□□□ 0.89
SBDSP1-205ENST00000456312 SV2BQ7L1I2 683 aa20.64■□□□□ 0.89
SBDSP1-205ENST00000456312 SRGAP1Q7Z6B7 1085 aa20.64■□□□□ 0.89
SBDSP1-205ENST00000456312 NLRP7Q8WX94 980 aa20.64■□□□□ 0.89
SBDSP1-205ENST00000456312 DRC1Q96MC2 740 aa20.64■□□□□ 0.89
SBDSP1-205ENST00000456312 PYM1Q9BRP8 204 aaKnown RBP20.64■□□□□ 0.89
SBDSP1-205ENST00000456312 NTPCRQ9BSD7 190 aaKnown RBP20.64■□□□□ 0.89
SBDSP1-205ENST00000456312 C17orf75Q9HAS0 396 aa20.64■□□□□ 0.89
SBDSP1-205ENST00000456312 TRIP11Q15643 1979 aa20.63■□□□□ 0.89
SBDSP1-205ENST00000456312 CSDE1O75534 798 aaKnown RBP20.63■□□□□ 0.89
SBDSP1-205ENST00000456312 RPS6KA5O75582 802 aa20.63■□□□□ 0.89
SBDSP1-205ENST00000456312 SLFN14P0C7P3 912 aa20.63■□□□□ 0.89
SBDSP1-205ENST00000456312 SRGAP2CP0DJJ0 459 aa20.63■□□□□ 0.89
SBDSP1-205ENST00000456312 MBTD1Q05BQ5 628 aa20.63■□□□□ 0.89
SBDSP1-205ENST00000456312 RAD51AP2Q09MP3 1159 aa20.63■□□□□ 0.89
SBDSP1-205ENST00000456312 DSC3Q14574 896 aa20.63■□□□□ 0.89
SBDSP1-205ENST00000456312 SHHQ15465 462 aa20.63■□□□□ 0.89
SBDSP1-205ENST00000456312 LONRF3Q496Y0 759 aa20.63■□□□□ 0.89
SBDSP1-205ENST00000456312 CHRDL2Q6WN34 429 aa20.63■□□□□ 0.89
SBDSP1-205ENST00000456312 FMR1NBQ8N0W7 255 aaPredicted RBP20.63■□□□□ 0.89
SBDSP1-205ENST00000456312 DDX12PQ92771 950 aa20.63■□□□□ 0.89
SBDSP1-205ENST00000456312 APBB2Q92870 758 aa20.63■□□□□ 0.89
SBDSP1-205ENST00000456312 GCOM2Q9BZD3 368 aaPredicted RBP20.63■□□□□ 0.89
SBDSP1-205ENST00000456312 TRIM9Q9C026 710 aa20.63■□□□□ 0.89
SBDSP1-205ENST00000456312 CCDC113Q9H0I3 377 aa20.63■□□□□ 0.89
SBDSP1-205ENST00000456312 ARHGAP28Q9P2N2 729 aa20.63■□□□□ 0.89
SBDSP1-205ENST00000456312 SERTAD1Q9UHV2 236 aa20.63■□□□□ 0.89
SBDSP1-205ENST00000456312 SFI1A8K8P3 1242 aa20.62■□□□□ 0.89
SBDSP1-205ENST00000456312 BAIAP3O94812 1187 aa20.62■□□□□ 0.89
SBDSP1-205ENST00000456312 SYKP43405 635 aa20.62■□□□□ 0.89
SBDSP1-205ENST00000456312 NPTX2P47972 431 aa20.62■□□□□ 0.89
SBDSP1-205ENST00000456312 TFDP1Q14186 410 aa20.62■□□□□ 0.89
SBDSP1-205ENST00000456312 FAM43BQ6ZT52 329 aaPredicted RBP20.62■□□□□ 0.89
SBDSP1-205ENST00000456312 RTN4RL1Q86UN2 441 aaPredicted RBP20.62■□□□□ 0.89
SBDSP1-205ENST00000456312 SPIRE2Q8WWL2 714 aa20.62■□□□□ 0.89
SBDSP1-205ENST00000456312 SEPT8Q92599 483 aa20.62■□□□□ 0.89
SBDSP1-205ENST00000456312 STAMQ92783 540 aa20.62■□□□□ 0.89
SBDSP1-205ENST00000456312 UBE2OQ9C0C9 1292 aaKnown RBP20.62■□□□□ 0.89
SBDSP1-205ENST00000456312 CXXC1Q9P0U4 656 aaPredicted RBP20.62■□□□□ 0.89
SBDSP1-205ENST00000456312 USP25Q9UHP3 1055 aa20.62■□□□□ 0.89
SBDSP1-205ENST00000456312 ST3GAL5Q9UNP4 418 aa20.62■□□□□ 0.89
SBDSP1-205ENST00000456312 LOC101059915A0A1B0GWI6 518 aaPredicted RBP20.61■□□□□ 0.89
SBDSP1-205ENST00000456312 MGEA5O60502 916 aa20.61■□□□□ 0.89
SBDSP1-205ENST00000456312 FGBP02675 491 aa20.61■□□□□ 0.89
SBDSP1-205ENST00000456312 EDN1P05305 212 aa20.61■□□□□ 0.89
SBDSP1-205ENST00000456312 PLS3P13797 630 aa20.61■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms