RNA–Protein interactions for RNA: ENST00000455656.1

TMEM56-202, Transcript of transmembrane protein 56, humanhuman

TSL 5

Gene TMEM56, Length 609 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM56-202ENST00000455656 IGSF22Q8N9C0 903 aa13.22□□□□□ -0.29
TMEM56-202ENST00000455656 NLRP4Q96MN2 994 aa13.22□□□□□ -0.29
TMEM56-202ENST00000455656 MTRQ99707 1265 aa13.22□□□□□ -0.29
TMEM56-202ENST00000455656 NOL7Q9UMY1 257 aaKnown RBP13.22□□□□□ -0.29
TMEM56-202ENST00000455656 SMC3Q9UQE7 1217 aa13.22□□□□□ -0.29
TMEM56-202ENST00000455656 A0A0C4DFX4 3053 aa13.21□□□□□ -0.29
TMEM56-202ENST00000455656 GRM6O15303 877 aa13.21□□□□□ -0.29
TMEM56-202ENST00000455656 DGAT1O75907 488 aa13.21□□□□□ -0.29
TMEM56-202ENST00000455656 RB1P06400 928 aa13.21□□□□□ -0.29
TMEM56-202ENST00000455656 CTNNB1P35222 781 aa13.21□□□□□ -0.29
TMEM56-202ENST00000455656 ARL2P36404 184 aa13.21□□□□□ -0.29
TMEM56-202ENST00000455656 IFNLR1Q8IU57 520 aaPredicted RBP13.21□□□□□ -0.29
TMEM56-202ENST00000455656 EXOC8Q8IYI6 725 aa13.21□□□□□ -0.29
TMEM56-202ENST00000455656 ASAP3Q8TDY4 903 aa13.21□□□□□ -0.29
TMEM56-202ENST00000455656 PSPC1Q8WXF1 523 aaKnown RBP13.21□□□□□ -0.29
TMEM56-202ENST00000455656 TRAIPQ9BWF2 469 aa13.21□□□□□ -0.29
TMEM56-202ENST00000455656 CWH43Q9H720 699 aa13.21□□□□□ -0.29
TMEM56-202ENST00000455656 DBR1Q9UK59 544 aaKnown RBP13.21□□□□□ -0.29
TMEM56-202ENST00000455656 KIF3AQ9Y496 699 aa13.21□□□□□ -0.29
TMEM56-202ENST00000455656 ZSCAN21Q9Y5A6 473 aaPredicted RBP13.21□□□□□ -0.29
TMEM56-202ENST00000455656 PCDHB7Q9Y5E2 793 aa13.21□□□□□ -0.29
TMEM56-202ENST00000455656 A0A0U1RQF3 1178 aa13.2□□□□□ -0.3
TMEM56-202ENST00000455656 DNAJB1P25685 340 aa13.2□□□□□ -0.3
TMEM56-202ENST00000455656 PRPHP41219 470 aa13.2□□□□□ -0.3
TMEM56-202ENST00000455656 ATP2C1P98194 919 aaPredicted RBP13.2□□□□□ -0.3
TMEM56-202ENST00000455656 CAPSQ13938 189 aa13.2□□□□□ -0.3
TMEM56-202ENST00000455656 PDIA5Q14554 519 aa13.2□□□□□ -0.3
TMEM56-202ENST00000455656 RILPL1Q5EBL4 403 aa13.2□□□□□ -0.3
TMEM56-202ENST00000455656 CLLU1OSQ5K130 101 aa13.2□□□□□ -0.3
TMEM56-202ENST00000455656 LRRC55Q6ZSA7 311 aa13.2□□□□□ -0.3
TMEM56-202ENST00000455656 TCP11Q8WWU5 503 aa13.2□□□□□ -0.3
TMEM56-202ENST00000455656 P2RX5Q93086 422 aa13.2□□□□□ -0.3
TMEM56-202ENST00000455656 MRPL38Q96DV4 380 aaKnown RBP13.2□□□□□ -0.3
TMEM56-202ENST00000455656 SCLT1Q96NL6 688 aa13.2□□□□□ -0.3
TMEM56-202ENST00000455656 CASD1Q96PB1 797 aa13.2□□□□□ -0.3
TMEM56-202ENST00000455656 MMTAG2Q9BU76 263 aaKnown RBP13.2□□□□□ -0.3
TMEM56-202ENST00000455656 COL25A1Q9BXS0 654 aaPredicted RBP13.2□□□□□ -0.3
TMEM56-202ENST00000455656 ATP6V0A4Q9HBG4 840 aa13.2□□□□□ -0.3
TMEM56-202ENST00000455656 CHST12Q9NRB3 414 aa13.2□□□□□ -0.3
TMEM56-202ENST00000455656 AGPAT5Q9NUQ2 364 aa13.2□□□□□ -0.3
TMEM56-202ENST00000455656 THEGQ9P2T0 379 aa13.2□□□□□ -0.3
TMEM56-202ENST00000455656 LRFN2Q9ULH4 789 aa13.2□□□□□ -0.3
TMEM56-202ENST00000455656 RWDD3Q9Y3V2 267 aa13.2□□□□□ -0.3
TMEM56-202ENST00000455656 VCANP13611 3396 aa13.2□□□□□ -0.3
TMEM56-202ENST00000455656 TCF20Q9UGU0 1960 aaKnown RBP13.2□□□□□ -0.3
TMEM56-202ENST00000455656 MYO7AQ13402 2215 aa13.19□□□□□ -0.3
TMEM56-202ENST00000455656 TBKBP1A7MCY6 615 aa13.19□□□□□ -0.3
TMEM56-202ENST00000455656 MEIS3P2A8K0S8 358 aa13.19□□□□□ -0.3
TMEM56-202ENST00000455656 PP2D1A8MPX8 630 aa13.19□□□□□ -0.3
TMEM56-202ENST00000455656 LAD1O00515 517 aa13.19□□□□□ -0.3
TMEM56-202ENST00000455656 ASAP2O43150 1006 aa13.19□□□□□ -0.3
TMEM56-202ENST00000455656 ITGB1P05556 798 aa13.19□□□□□ -0.3
TMEM56-202ENST00000455656 SRGAP2CP0DJJ0 459 aa13.19□□□□□ -0.3
TMEM56-202ENST00000455656 ZSCAN20P17040 1043 aaPredicted RBP13.19□□□□□ -0.3
TMEM56-202ENST00000455656 IBSPP21815 317 aaPredicted RBP13.19□□□□□ -0.3
TMEM56-202ENST00000455656 MUTP22033 750 aa13.19□□□□□ -0.3
TMEM56-202ENST00000455656 SFPQP23246 707 aaKnown RBP eCLIP13.19□□□□□ -0.3
TMEM56-202ENST00000455656 GLRA2P23416 452 aa13.19□□□□□ -0.3
TMEM56-202ENST00000455656 HOXA11P31270 313 aaPredicted RBP13.19□□□□□ -0.3
TMEM56-202ENST00000455656 PTENP60484 403 aa13.19□□□□□ -0.3
TMEM56-202ENST00000455656 POU5F1BQ06416 359 aa13.19□□□□□ -0.3
TMEM56-202ENST00000455656 AMHR2Q16671 573 aa13.19□□□□□ -0.3
TMEM56-202ENST00000455656 UBXN11Q5T124 520 aa13.19□□□□□ -0.3
TMEM56-202ENST00000455656 MCTP1Q6DN14 999 aa13.19□□□□□ -0.3
TMEM56-202ENST00000455656 SRGAP1Q7Z6B7 1085 aa13.19□□□□□ -0.3
TMEM56-202ENST00000455656 RNF149Q8NC42 400 aa13.19□□□□□ -0.3
TMEM56-202ENST00000455656 PLVAPQ9BX97 442 aa13.19□□□□□ -0.3
TMEM56-202ENST00000455656 INO80BQ9C086 356 aaPredicted RBP13.19□□□□□ -0.3
TMEM56-202ENST00000455656 GPRC5CQ9NQ84 441 aa13.19□□□□□ -0.3
TMEM56-202ENST00000455656 LRWD1Q9UFC0 647 aa13.19□□□□□ -0.3
TMEM56-202ENST00000455656 PLAGL2Q9UPG8 496 aa13.19□□□□□ -0.3
TMEM56-202ENST00000455656 BRWD1Q9NSI6 2320 aa13.19□□□□□ -0.3
TMEM56-202ENST00000455656 USO1O60763 962 aaKnown RBP13.18□□□□□ -0.3
TMEM56-202ENST00000455656 PHKA2P46019 1235 aa13.18□□□□□ -0.3
TMEM56-202ENST00000455656 TFF2Q03403 129 aa13.18□□□□□ -0.3
TMEM56-202ENST00000455656 COL19A1Q14993 1142 aa13.18□□□□□ -0.3
TMEM56-202ENST00000455656 LARP1BQ659C4 914 aaKnown RBP13.18□□□□□ -0.3
TMEM56-202ENST00000455656 CATSPER4Q7RTX7 472 aa13.18□□□□□ -0.3
TMEM56-202ENST00000455656 ERMNQ8TAM6 284 aa13.18□□□□□ -0.3
TMEM56-202ENST00000455656 SPPL3Q8TCT6 385 aa13.18□□□□□ -0.3
TMEM56-202ENST00000455656 ATXN2LQ8WWM7 1075 aaKnown RBP13.18□□□□□ -0.3
TMEM56-202ENST00000455656 BSNDQ8WZ55 320 aa13.18□□□□□ -0.3
TMEM56-202ENST00000455656 NACC1Q96RE7 527 aa13.18□□□□□ -0.3
TMEM56-202ENST00000455656 C11orf84Q9BUA3 381 aaPredicted RBP13.18□□□□□ -0.3
TMEM56-202ENST00000455656 TMEM117Q9H0C3 514 aa13.18□□□□□ -0.3
TMEM56-202ENST00000455656 POLR3FQ9H1D9 316 aaPredicted RBP13.18□□□□□ -0.3
TMEM56-202ENST00000455656 ALG13Q9NP73 1137 aaKnown RBP13.18□□□□□ -0.3
TMEM56-202ENST00000455656 TYW1Q9NV66 732 aaKnown RBP13.18□□□□□ -0.3
TMEM56-202ENST00000455656 DACT1Q9NYF0 836 aa13.18□□□□□ -0.3
TMEM56-202ENST00000455656 PIN4Q9Y237 131 aaKnown RBP13.18□□□□□ -0.3
TMEM56-202ENST00000455656 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP13.17□□□□□ -0.3
TMEM56-202ENST00000455656 H3BQV1 296 aa13.17□□□□□ -0.3
TMEM56-202ENST00000455656 TSPAN1O60635 241 aa13.17□□□□□ -0.3
TMEM56-202ENST00000455656 ZNF623O75123 536 aa13.17□□□□□ -0.3
TMEM56-202ENST00000455656 EOMESO95936 686 aa13.17□□□□□ -0.3
TMEM56-202ENST00000455656 CDC25AP30304 524 aa13.17□□□□□ -0.3
TMEM56-202ENST00000455656 MBTD1Q05BQ5 628 aa13.17□□□□□ -0.3
TMEM56-202ENST00000455656 MXD4Q14582 209 aaPredicted RBP13.17□□□□□ -0.3
TMEM56-202ENST00000455656 NAALADL2Q58DX5 795 aa13.17□□□□□ -0.3
TMEM56-202ENST00000455656 HAUS3Q68CZ6 603 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms