RNA–Protein interactions for RNA: ENST00000454612.6

DDR1-240, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene DDR1, Length 3,942 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-240ENST00000454612 BCRP11274 1271 aa12.08□□□□□ -0.47
DDR1-240ENST00000454612 KCNMA1Q12791 1236 aa12.08□□□□□ -0.47
DDR1-240ENST00000454612 PDIA5Q14554 519 aa12.08□□□□□ -0.47
DDR1-240ENST00000454612 LDHDQ86WU2 507 aa12.08□□□□□ -0.47
DDR1-240ENST00000454612 SEPT9Q9UHD8 586 aaPredicted RBP12.08□□□□□ -0.47
DDR1-240ENST00000454612 MRPL11Q9Y3B7 192 aaKnown RBP12.08□□□□□ -0.47
DDR1-240ENST00000454612 HIP1RO75146 1068 aa12.08□□□□□ -0.48
DDR1-240ENST00000454612 SMTNP53814 917 aa12.08□□□□□ -0.48
DDR1-240ENST00000454612 IGBP1P78318 339 aa12.08□□□□□ -0.48
DDR1-240ENST00000454612 PSMD2Q13200 908 aa12.08□□□□□ -0.48
DDR1-240ENST00000454612 ZBTB33Q86T24 672 aa12.08□□□□□ -0.48
DDR1-240ENST00000454612 HOMEZQ8IX15 550 aa12.08□□□□□ -0.48
DDR1-240ENST00000454612 CYP26A1O43174 497 aa12.08□□□□□ -0.48
DDR1-240ENST00000454612 NR1D1P20393 614 aa12.08□□□□□ -0.48
DDR1-240ENST00000454612 DYNLT1P63172 113 aa12.08□□□□□ -0.48
DDR1-240ENST00000454612 SLC18A3Q16572 532 aa12.08□□□□□ -0.48
DDR1-240ENST00000454612 NIM1KQ8IY84 436 aa12.08□□□□□ -0.48
DDR1-240ENST00000454612 MDM1Q8TC05 714 aa12.08□□□□□ -0.48
DDR1-240ENST00000454612 CNKSR1Q969H4 720 aa12.08□□□□□ -0.48
DDR1-240ENST00000454612 TLR10Q9BXR5 811 aa12.08□□□□□ -0.48
DDR1-240ENST00000454612 ZNF408Q9H9D4 720 aa12.08□□□□□ -0.48
DDR1-240ENST00000454612 NOC2LQ9Y3T9 749 aaKnown RBP12.08□□□□□ -0.48
DDR1-240ENST00000454612 SCARA5Q6ZMJ2 495 aa12.07□□□□□ -0.48
DDR1-240ENST00000454612 PODNQ7Z5L7 613 aa12.07□□□□□ -0.48
DDR1-240ENST00000454612 C1orf54Q8WWF1 131 aa12.07□□□□□ -0.48
DDR1-240ENST00000454612 FBXL5Q9UKA1 691 aa12.07□□□□□ -0.48
DDR1-240ENST00000454612 DAAM1Q9Y4D1 1078 aa12.07□□□□□ -0.48
DDR1-240ENST00000454612 BCORQ6W2J9 1755 aa12.07□□□□□ -0.48
DDR1-240ENST00000454612 ARAP2Q8WZ64 1704 aa12.07□□□□□ -0.48
DDR1-240ENST00000454612 EIF4E1BA6NMX2 242 aaKnown RBP12.07□□□□□ -0.48
DDR1-240ENST00000454612 FOSP01100 380 aaPredicted RBP12.07□□□□□ -0.48
DDR1-240ENST00000454612 ACTN3Q08043 901 aaPredicted RBP12.07□□□□□ -0.48
DDR1-240ENST00000454612 NACC1Q96RE7 527 aa12.07□□□□□ -0.48
DDR1-240ENST00000454612 NUCKS1Q9H1E3 243 aaKnown RBP12.07□□□□□ -0.48
DDR1-240ENST00000454612 METTL14Q9HCE5 456 aaKnown RBP12.07□□□□□ -0.48
DDR1-240ENST00000454612 SCN7AQ01118 1682 aa12.07□□□□□ -0.48
DDR1-240ENST00000454612 MXI1P50539 228 aa12.07□□□□□ -0.48
DDR1-240ENST00000454612 MAGOHP61326 146 aaKnown RBP12.07□□□□□ -0.48
DDR1-240ENST00000454612 GIT2Q14161 759 aa12.07□□□□□ -0.48
DDR1-240ENST00000454612 CREG2Q8IUH2 290 aa12.07□□□□□ -0.48
DDR1-240ENST00000454612 RPUSD2Q8IZ73 545 aaKnown RBP12.07□□□□□ -0.48
DDR1-240ENST00000454612 UPF1Q92900 1129 aaKnown RBP eCLIP12.07□□□□□ -0.481e-7■■■■□ 23.7
DDR1-240ENST00000454612 KAT5Q92993 513 aa12.07□□□□□ -0.48
DDR1-240ENST00000454612 TBC1D31Q96DN5 1066 aa12.07□□□□□ -0.48
DDR1-240ENST00000454612 WDR11Q9BZH6 1224 aa12.07□□□□□ -0.48
DDR1-240ENST00000454612 TAOK3Q9H2K8 898 aa12.07□□□□□ -0.48
DDR1-240ENST00000454612 TTC7AQ9ULT0 858 aaPredicted RBP12.07□□□□□ -0.48
DDR1-240ENST00000454612 DUOX1Q9NRD9 1551 aa12.07□□□□□ -0.48
DDR1-240ENST00000454612 CACNA1SQ13698 1873 aa12.07□□□□□ -0.48
DDR1-240ENST00000454612 FXR2P51116 673 aaKnown RBP eCLIP12.06□□□□□ -0.482e-6■■■□□ 15.4
DDR1-240ENST00000454612 KLHDC7AQ5VTJ3 777 aa12.06□□□□□ -0.48
DDR1-240ENST00000454612 TTC16Q8NEE8 873 aa12.06□□□□□ -0.48
DDR1-240ENST00000454612 GDAP1Q8TB36 358 aa12.06□□□□□ -0.48
DDR1-240ENST00000454612 SLC35G2Q8TBE7 412 aa12.06□□□□□ -0.48
DDR1-240ENST00000454612 LRRC45Q96CN5 670 aa12.06□□□□□ -0.48
DDR1-240ENST00000454612 RMDN3Q96TC7 470 aa12.06□□□□□ -0.48
DDR1-240ENST00000454612 NAP1L4Q99733 375 aaKnown RBP12.06□□□□□ -0.48
DDR1-240ENST00000454612 TACO1Q9BSH4 297 aaKnown RBP12.06□□□□□ -0.48
DDR1-240ENST00000454612 TRIM6Q9C030 488 aaPredicted RBP12.06□□□□□ -0.48
DDR1-240ENST00000454612 GLT8D2Q9H1C3 349 aa12.06□□□□□ -0.48
DDR1-240ENST00000454612 ZNF831Q5JPB2 1677 aa12.06□□□□□ -0.48
DDR1-240ENST00000454612 UBR3Q6ZT12 1888 aa12.06□□□□□ -0.48
DDR1-240ENST00000454612 FOXN3O00409 490 aaPredicted RBP12.06□□□□□ -0.48
DDR1-240ENST00000454612 RGS16O15492 202 aaPredicted RBP12.06□□□□□ -0.48
DDR1-240ENST00000454612 LRRC31Q6UY01 552 aa12.06□□□□□ -0.48
DDR1-240ENST00000454612 METTL13Q8N6R0 699 aa12.06□□□□□ -0.48
DDR1-240ENST00000454612 MTMR9Q96QG7 549 aa12.06□□□□□ -0.48
DDR1-240ENST00000454612 CBWD1Q9BRT8 395 aa12.06□□□□□ -0.48
DDR1-240ENST00000454612 RASAL2Q9UJF2 1139 aa12.06□□□□□ -0.48
DDR1-240ENST00000454612 FAM169AQ9Y6X4 670 aa12.06□□□□□ -0.48
DDR1-240ENST00000454612 ANO9A1A5B4 782 aa12.06□□□□□ -0.48
DDR1-240ENST00000454612 KIF1CO43896 1103 aaKnown RBP12.06□□□□□ -0.48
DDR1-240ENST00000454612 POTEJP0CG39 1038 aa12.06□□□□□ -0.48
DDR1-240ENST00000454612 HDLBPQ00341 1268 aaKnown RBP12.06□□□□□ -0.48
DDR1-240ENST00000454612 CEP55Q53EZ4 464 aa12.06□□□□□ -0.48
DDR1-240ENST00000454612 DENND2CQ68D51 928 aa12.06□□□□□ -0.48
DDR1-240ENST00000454612 RINT1Q6NUQ1 792 aa12.06□□□□□ -0.48
DDR1-240ENST00000454612 UBL4BQ8N7F7 174 aa12.06□□□□□ -0.48
DDR1-240ENST00000454612 SLC16A10Q8TF71 515 aa12.06□□□□□ -0.48
DDR1-240ENST00000454612 SLC20A1Q8WUM9 679 aa12.06□□□□□ -0.48
DDR1-240ENST00000454612 CASKIN2Q8WXE0 1202 aa12.06□□□□□ -0.48
DDR1-240ENST00000454612 FAM213AQ9BRX8 229 aa12.06□□□□□ -0.48
DDR1-240ENST00000454612 SERPINA10Q9UK55 444 aa12.06□□□□□ -0.48
DDR1-240ENST00000454612 STK38LQ9Y2H1 464 aa12.06□□□□□ -0.48
DDR1-240ENST00000454612 GOLGA8SH3BPF8 625 aa12.05□□□□□ -0.48
DDR1-240ENST00000454612 RBAK-RBAKDNI3L0D1 243 aa12.05□□□□□ -0.48
DDR1-240ENST00000454612 CTNND1O60716 968 aaKnown RBP12.05□□□□□ -0.48
DDR1-240ENST00000454612 FGFR4P22455 802 aa12.05□□□□□ -0.48
DDR1-240ENST00000454612 PON1P27169 355 aa12.05□□□□□ -0.48
DDR1-240ENST00000454612 ADCY8P40145 1251 aa12.05□□□□□ -0.48
DDR1-240ENST00000454612 MKRN3Q13064 507 aaKnown RBP12.05□□□□□ -0.48
DDR1-240ENST00000454612 DAB2IPQ5VWQ8 1189 aa12.05□□□□□ -0.48
DDR1-240ENST00000454612 B4GALNT4Q76KP1 1039 aa12.05□□□□□ -0.48
DDR1-240ENST00000454612 SAMD7Q7Z3H4 446 aa12.05□□□□□ -0.48
DDR1-240ENST00000454612 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP12.05□□□□□ -0.48
DDR1-240ENST00000454612 MSANTD4Q8NCY6 345 aa12.05□□□□□ -0.48
DDR1-240ENST00000454612 ANKS1AQ92625 1134 aa12.05□□□□□ -0.48
DDR1-240ENST00000454612 TOPORSQ9NS56 1045 aaPredicted RBP12.05□□□□□ -0.48
DDR1-240ENST00000454612 RREB1Q92766 1687 aa12.05□□□□□ -0.48
DDR1-240ENST00000454612 NFIBO00712 420 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 117.1 ms