RNA–Protein interactions for RNA: ENST00000454398.1

HLA-DPA3-207, Transcript of major histocompatibility complex, class II, DP alpha 3 (pseudogene), humanhuman

BASIC

Gene HLA-DPA3, Length 229 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA3-207ENST00000454398 FAM189BP81408 668 aa6.77□□□□□ -1.33
HLA-DPA3-207ENST00000454398 SETQ01105 290 aaPredicted RBP6.77□□□□□ -1.33
HLA-DPA3-207ENST00000454398 EXOSC10Q01780 885 aaKnown RBP6.77□□□□□ -1.33
HLA-DPA3-207ENST00000454398 PLCB3Q01970 1234 aa6.77□□□□□ -1.33
HLA-DPA3-207ENST00000454398 TBC1D8BQ0IIM8 1120 aa6.77□□□□□ -1.33
HLA-DPA3-207ENST00000454398 SMC1AQ14683 1233 aaKnown RBP6.77□□□□□ -1.33
HLA-DPA3-207ENST00000454398 PKN1Q16512 942 aa6.77□□□□□ -1.33
HLA-DPA3-207ENST00000454398 PFKFB3Q16875 520 aaPredicted RBP6.77□□□□□ -1.33
HLA-DPA3-207ENST00000454398 ZNF746Q6NUN9 644 aaPredicted RBP6.77□□□□□ -1.33
HLA-DPA3-207ENST00000454398 SYNE3Q6ZMZ3 975 aa6.77□□□□□ -1.33
HLA-DPA3-207ENST00000454398 NIPA1Q7RTP0 329 aa6.77□□□□□ -1.33
HLA-DPA3-207ENST00000454398 ZNF598Q86UK7 904 aaKnown RBP6.77□□□□□ -1.33
HLA-DPA3-207ENST00000454398 VPS52Q8N1B4 723 aa6.77□□□□□ -1.33
HLA-DPA3-207ENST00000454398 NME8Q8N427 588 aa6.77□□□□□ -1.33
HLA-DPA3-207ENST00000454398 BBXQ8WY36 941 aaPredicted RBP6.77□□□□□ -1.33
HLA-DPA3-207ENST00000454398 BRF1Q92994 677 aa6.77□□□□□ -1.33
HLA-DPA3-207ENST00000454398 B3GALT6Q96L58 329 aa6.77□□□□□ -1.33
HLA-DPA3-207ENST00000454398 JAKMIP1Q96N16 626 aaKnown RBP6.77□□□□□ -1.33
HLA-DPA3-207ENST00000454398 AIFM3Q96NN9 605 aa6.77□□□□□ -1.33
HLA-DPA3-207ENST00000454398 CEP89Q96ST8 783 aa6.77□□□□□ -1.33
HLA-DPA3-207ENST00000454398 CDCA3Q99618 268 aaPredicted RBP6.77□□□□□ -1.33
HLA-DPA3-207ENST00000454398 LARP6Q9BRS8 491 aaKnown RBP6.77□□□□□ -1.33
HLA-DPA3-207ENST00000454398 ZBP1Q9H171 429 aa6.77□□□□□ -1.33
HLA-DPA3-207ENST00000454398 ADAM7Q9H2U9 754 aa6.77□□□□□ -1.33
HLA-DPA3-207ENST00000454398 TBC1D13Q9NVG8 400 aa6.77□□□□□ -1.33
HLA-DPA3-207ENST00000454398 CACNG4Q9UBN1 327 aa6.77□□□□□ -1.33
HLA-DPA3-207ENST00000454398 LIMD1Q9UGP4 676 aa6.77□□□□□ -1.33
HLA-DPA3-207ENST00000454398 DBR1Q9UK59 544 aaKnown RBP6.77□□□□□ -1.33
HLA-DPA3-207ENST00000454398 SORCS3Q9UPU3 1222 aa6.77□□□□□ -1.33
HLA-DPA3-207ENST00000454398 MAFBQ9Y5Q3 323 aaPredicted RBP6.77□□□□□ -1.33
HLA-DPA3-207ENST00000454398 CACNA1BQ00975 2339 aa6.77□□□□□ -1.33
HLA-DPA3-207ENST00000454398 A0A087WZ62 844 aa6.76□□□□□ -1.33
HLA-DPA3-207ENST00000454398 WDR64B1ANS9 1081 aa6.76□□□□□ -1.33
HLA-DPA3-207ENST00000454398 GALR2O43603 387 aaPredicted RBP6.76□□□□□ -1.33
HLA-DPA3-207ENST00000454398 GAS7O60861 476 aa6.76□□□□□ -1.33
HLA-DPA3-207ENST00000454398 N4BP1O75113 896 aaKnown RBP6.76□□□□□ -1.33
HLA-DPA3-207ENST00000454398 ZSCAN20P17040 1043 aaPredicted RBP6.76□□□□□ -1.33
HLA-DPA3-207ENST00000454398 EIF4BP23588 611 aaKnown RBP6.76□□□□□ -1.33
HLA-DPA3-207ENST00000454398 SLC11A1P49279 550 aa6.76□□□□□ -1.33
HLA-DPA3-207ENST00000454398 CCT2P78371 535 aaKnown RBP6.76□□□□□ -1.33
HLA-DPA3-207ENST00000454398 FGD1P98174 961 aa6.76□□□□□ -1.33
HLA-DPA3-207ENST00000454398 PTPN14Q15678 1187 aa6.76□□□□□ -1.33
HLA-DPA3-207ENST00000454398 LRCH2Q5VUJ6 765 aa6.76□□□□□ -1.33
HLA-DPA3-207ENST00000454398 TWF2Q6IBS0 349 aaKnown RBP6.76□□□□□ -1.33
HLA-DPA3-207ENST00000454398 TMEM184AQ6ZMB5 413 aa6.76□□□□□ -1.33
HLA-DPA3-207ENST00000454398 Q6ZUG5 572 aa6.76□□□□□ -1.33
HLA-DPA3-207ENST00000454398 DHX32Q7L7V1 743 aaKnown RBP6.76□□□□□ -1.33
HLA-DPA3-207ENST00000454398 ZNF280BQ86YH2 543 aa6.76□□□□□ -1.33
HLA-DPA3-207ENST00000454398 SMAP1Q8IYB5 467 aaPredicted RBP6.76□□□□□ -1.33
HLA-DPA3-207ENST00000454398 TMTC2Q8N394 836 aa6.76□□□□□ -1.33
HLA-DPA3-207ENST00000454398 MRPL43Q8N983 215 aaKnown RBP6.76□□□□□ -1.33
HLA-DPA3-207ENST00000454398 RSAD2Q8WXG1 361 aa6.76□□□□□ -1.33
HLA-DPA3-207ENST00000454398 CASP10Q92851 521 aa6.76□□□□□ -1.33
HLA-DPA3-207ENST00000454398 TMEM169Q96HH4 297 aa6.76□□□□□ -1.33
HLA-DPA3-207ENST00000454398 CCDC136Q96JN2 1154 aa6.76□□□□□ -1.33
HLA-DPA3-207ENST00000454398 RIPOR3Q96MK2 946 aa6.76□□□□□ -1.33
HLA-DPA3-207ENST00000454398 FDXACB1Q9BRP7 624 aaPredicted RBP6.76□□□□□ -1.33
HLA-DPA3-207ENST00000454398 MTA3Q9BTC8 594 aa6.76□□□□□ -1.33
HLA-DPA3-207ENST00000454398 SLC26A6Q9BXS9 759 aa6.76□□□□□ -1.33
HLA-DPA3-207ENST00000454398 MFSD1Q9H3U5 465 aa6.76□□□□□ -1.33
HLA-DPA3-207ENST00000454398 ELAC1Q9H777 363 aaKnown RBP6.76□□□□□ -1.33
HLA-DPA3-207ENST00000454398 NGRNQ9NPE2 291 aaKnown RBP6.76□□□□□ -1.33
HLA-DPA3-207ENST00000454398 DISC1Q9NRI5 854 aa6.76□□□□□ -1.33
HLA-DPA3-207ENST00000454398 PUF60Q9UHX1 559 aaKnown RBP6.76□□□□□ -1.33
HLA-DPA3-207ENST00000454398 LZTS1Q9Y250 596 aa6.76□□□□□ -1.33
HLA-DPA3-207ENST00000454398 PRG3Q9Y2Y8 225 aaPredicted RBP6.76□□□□□ -1.33
HLA-DPA3-207ENST00000454398 NR2E1Q9Y466 385 aa6.76□□□□□ -1.33
HLA-DPA3-207ENST00000454398 PCDHA10Q9Y5I2 948 aa6.76□□□□□ -1.33
HLA-DPA3-207ENST00000454398 NID2Q14112 1375 aa6.75□□□□□ -1.33
HLA-DPA3-207ENST00000454398 ESYT2A0FGR8 921 aa6.75□□□□□ -1.33
HLA-DPA3-207ENST00000454398 hCG_1984214I3L0E3 225 aa6.75□□□□□ -1.33
HLA-DPA3-207ENST00000454398 HOXA2O43364 376 aa6.75□□□□□ -1.33
HLA-DPA3-207ENST00000454398 PI15O43692 258 aa6.75□□□□□ -1.33
HLA-DPA3-207ENST00000454398 SLC37A4O43826 429 aa6.75□□□□□ -1.33
HLA-DPA3-207ENST00000454398 CXCL14O95715 111 aa6.75□□□□□ -1.33
HLA-DPA3-207ENST00000454398 CYP3A4P08684 503 aa6.75□□□□□ -1.33
HLA-DPA3-207ENST00000454398 HOXB8P17481 243 aaPredicted RBP6.75□□□□□ -1.33
HLA-DPA3-207ENST00000454398 PHKA2P46019 1235 aa6.75□□□□□ -1.33
HLA-DPA3-207ENST00000454398 ALDH7A1P49419 539 aaKnown RBP6.75□□□□□ -1.33
HLA-DPA3-207ENST00000454398 NPEPPSP55786 919 aa6.75□□□□□ -1.33
HLA-DPA3-207ENST00000454398 KRT17Q04695 432 aa6.75□□□□□ -1.33
HLA-DPA3-207ENST00000454398 RNASELQ05823 741 aaKnown RBP6.75□□□□□ -1.33
HLA-DPA3-207ENST00000454398 TPRNQ4KMQ1 711 aa6.75□□□□□ -1.33
HLA-DPA3-207ENST00000454398 KIAA1841Q6NSI8 718 aa6.75□□□□□ -1.33
HLA-DPA3-207ENST00000454398 CES5AQ6NT32 575 aa6.75□□□□□ -1.33
HLA-DPA3-207ENST00000454398 GLB1LQ6UWU2 654 aa6.75□□□□□ -1.33
HLA-DPA3-207ENST00000454398 CABP7Q86V35 215 aa6.75□□□□□ -1.33
HLA-DPA3-207ENST00000454398 RHPN2Q8IUC4 686 aa6.75□□□□□ -1.33
HLA-DPA3-207ENST00000454398 GLYCTKQ8IVS8 523 aa6.75□□□□□ -1.33
HLA-DPA3-207ENST00000454398 SIX5Q8N196 739 aa6.75□□□□□ -1.33
HLA-DPA3-207ENST00000454398 ZNF713Q8N859 430 aaPredicted RBP6.75□□□□□ -1.33
HLA-DPA3-207ENST00000454398 ZNF579Q8NAF0 562 aaKnown RBP6.75□□□□□ -1.33
HLA-DPA3-207ENST00000454398 RIN2Q8WYP3 895 aaPredicted RBP6.75□□□□□ -1.33
HLA-DPA3-207ENST00000454398 RABGGTAQ92696 567 aa6.75□□□□□ -1.33
HLA-DPA3-207ENST00000454398 TNPO1Q92973 898 aaKnown RBP6.75□□□□□ -1.33
HLA-DPA3-207ENST00000454398 IGSF21Q96ID5 467 aa6.75□□□□□ -1.33
HLA-DPA3-207ENST00000454398 FAM167AQ96KS9 214 aa6.75□□□□□ -1.33
HLA-DPA3-207ENST00000454398 ZMYND12Q9H0C1 365 aa6.75□□□□□ -1.33
HLA-DPA3-207ENST00000454398 NRDE2Q9H7Z3 1164 aa6.75□□□□□ -1.33
HLA-DPA3-207ENST00000454398 MINDY3Q9H8M7 445 aa6.75□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms