RNA–Protein interactions for RNA: ENST00000453689.5

VPS16-205, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 3

Gene VPS16, Length 966 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-205ENST00000453689 COL4A3BPQ9Y5P4 624 aa16.31■□□□□ 0.2
VPS16-205ENST00000453689 CHD7Q9P2D1 2997 aa16.3■□□□□ 0.2
VPS16-205ENST00000453689 PP2D1A8MPX8 630 aa16.3■□□□□ 0.2
VPS16-205ENST00000453689 DGAT1O75907 488 aa16.3■□□□□ 0.2
VPS16-205ENST00000453689 FGFR4P22455 802 aa16.3■□□□□ 0.2
VPS16-205ENST00000453689 SPRED2Q7Z698 418 aa16.3■□□□□ 0.2
VPS16-205ENST00000453689 ZNF410Q86VK4 478 aa16.3■□□□□ 0.2
VPS16-205ENST00000453689 KRI1Q8N9T8 703 aaKnown RBP16.3■□□□□ 0.2
VPS16-205ENST00000453689 SNX29Q8TEQ0 813 aa16.3■□□□□ 0.2
VPS16-205ENST00000453689 LEO1Q8WVC0 666 aaPredicted RBP16.3■□□□□ 0.2
VPS16-205ENST00000453689 PRPF31Q8WWY3 499 aaKnown RBP16.3■□□□□ 0.2
VPS16-205ENST00000453689 SPATA32Q96LK8 384 aa16.3■□□□□ 0.2
VPS16-205ENST00000453689 NLRP4Q96MN2 994 aa16.3■□□□□ 0.2
VPS16-205ENST00000453689 NACC1Q96RE7 527 aa16.3■□□□□ 0.2
VPS16-205ENST00000453689 ADAM2Q99965 735 aa16.3■□□□□ 0.2
VPS16-205ENST00000453689 GCOM2Q9BZD3 368 aaPredicted RBP16.3■□□□□ 0.2
VPS16-205ENST00000453689 PRDM12Q9H4Q4 367 aa16.3■□□□□ 0.2
VPS16-205ENST00000453689 ATP6V0A4Q9HBG4 840 aa16.3■□□□□ 0.2
VPS16-205ENST00000453689 DBR1Q9UK59 544 aaKnown RBP16.3■□□□□ 0.2
VPS16-205ENST00000453689 STK24Q9Y6E0 443 aa16.3■□□□□ 0.2
VPS16-205ENST00000453689 PLXNA4Q9HCM2 1894 aa16.29■□□□□ 0.2
VPS16-205ENST00000453689 DENND3A2RUS2 1198 aa16.29■□□□□ 0.2
VPS16-205ENST00000453689 USO1O60763 962 aaKnown RBP16.29■□□□□ 0.2
VPS16-205ENST00000453689 CSDE1O75534 798 aaKnown RBP16.29■□□□□ 0.2
VPS16-205ENST00000453689 CDC25AP30304 524 aa16.29■□□□□ 0.2
VPS16-205ENST00000453689 LONP1P36776 959 aaKnown RBP16.29■□□□□ 0.2
VPS16-205ENST00000453689 LAMTOR4Q0VGL1 99 aa16.29■□□□□ 0.2
VPS16-205ENST00000453689 DSC3Q14574 896 aa16.29■□□□□ 0.2
VPS16-205ENST00000453689 FAM43BQ6ZT52 329 aaPredicted RBP16.29■□□□□ 0.2
VPS16-205ENST00000453689 CRIPAKQ8N1N5 446 aa16.29■□□□□ 0.2
VPS16-205ENST00000453689 SP7Q8TDD2 431 aaPredicted RBP16.29■□□□□ 0.2
VPS16-205ENST00000453689 AK8Q96MA6 479 aa16.29■□□□□ 0.2
VPS16-205ENST00000453689 YME1L1Q96TA2 773 aa16.29■□□□□ 0.2
VPS16-205ENST00000453689 CERS4Q9HA82 394 aa16.29■□□□□ 0.2
VPS16-205ENST00000453689 IFT122Q9HBG6 1241 aa16.29■□□□□ 0.2
VPS16-205ENST00000453689 RGS18Q9NS28 235 aa16.29■□□□□ 0.2
VPS16-205ENST00000453689 STXBP5LQ9Y2K9 1186 aa16.29■□□□□ 0.2
VPS16-205ENST00000453689 LINC01553A4QN01 128 aa16.28■□□□□ 0.2
VPS16-205ENST00000453689 C9IYK1 514 aa16.28■□□□□ 0.2
VPS16-205ENST00000453689 ASAP2O43150 1006 aa16.28■□□□□ 0.2
VPS16-205ENST00000453689 CUTAO60888 179 aa16.28■□□□□ 0.2
VPS16-205ENST00000453689 ME1P48163 572 aa16.28■□□□□ 0.2
VPS16-205ENST00000453689 GRIN1Q05586 938 aa16.28■□□□□ 0.2
VPS16-205ENST00000453689 KRT79Q5XKE5 535 aa16.28■□□□□ 0.2
VPS16-205ENST00000453689 NPAS4Q8IUM7 802 aa16.28■□□□□ 0.2
VPS16-205ENST00000453689 MMTAG2Q9BU76 263 aaKnown RBP16.28■□□□□ 0.2
VPS16-205ENST00000453689 RC3H2Q9HBD1 1191 aaKnown RBP16.28■□□□□ 0.2
VPS16-205ENST00000453689 C1orf112Q9NSG2 853 aa16.28■□□□□ 0.2
VPS16-205ENST00000453689 DDX19AQ9NUU7 478 aaKnown RBP16.28■□□□□ 0.2
VPS16-205ENST00000453689 KIAA1024Q9UPX6 916 aa16.28■□□□□ 0.2
VPS16-205ENST00000453689 TDRD15B5MCY1 1934 aaKnown RBP16.27■□□□□ 0.2
VPS16-205ENST00000453689 ARHGEF35A5YM69 484 aa16.27■□□□□ 0.2
VPS16-205ENST00000453689 SRGAP2CP0DJJ0 459 aa16.27■□□□□ 0.2
VPS16-205ENST00000453689 FOSL2P15408 326 aa16.27■□□□□ 0.2
VPS16-205ENST00000453689 SARSP49591 514 aaKnown RBP16.27■□□□□ 0.2
VPS16-205ENST00000453689 MXD4Q14582 209 aaPredicted RBP16.27■□□□□ 0.2
VPS16-205ENST00000453689 ZNF689Q96CS4 500 aaPredicted RBP16.27■□□□□ 0.2
VPS16-205ENST00000453689 CLIC6Q96NY7 704 aa16.27■□□□□ 0.2
VPS16-205ENST00000453689 INO80BQ9C086 356 aaPredicted RBP16.27■□□□□ 0.2
VPS16-205ENST00000453689 CSRNP2Q9H175 543 aa16.27■□□□□ 0.2
VPS16-205ENST00000453689 GDPD2Q9HCC8 539 aa16.27■□□□□ 0.2
VPS16-205ENST00000453689 ADGRA3Q8IWK6 1321 aa16.26■□□□□ 0.19
VPS16-205ENST00000453689 EPOPA6NHQ4 379 aa16.26■□□□□ 0.19
VPS16-205ENST00000453689 DGKIO75912 1065 aa16.26■□□□□ 0.19
VPS16-205ENST00000453689 STAG3L1P0CL83 205 aa16.26■□□□□ 0.19
VPS16-205ENST00000453689 ZSCAN20P17040 1043 aaPredicted RBP16.26■□□□□ 0.19
VPS16-205ENST00000453689 IBSPP21815 317 aaPredicted RBP16.26■□□□□ 0.19
VPS16-205ENST00000453689 SFPQP23246 707 aaKnown RBP eCLIP16.26■□□□□ 0.19
VPS16-205ENST00000453689 ARL2P36404 184 aa16.26■□□□□ 0.19
VPS16-205ENST00000453689 CSPP1Q1MSJ5 1256 aa16.26■□□□□ 0.19
VPS16-205ENST00000453689 SLC24A5Q71RS6 500 aa16.26■□□□□ 0.19
VPS16-205ENST00000453689 MAEAQ7L5Y9 396 aa16.26■□□□□ 0.19
VPS16-205ENST00000453689 RNF149Q8NC42 400 aa16.26■□□□□ 0.19
VPS16-205ENST00000453689 ASAP3Q8TDY4 903 aa16.26■□□□□ 0.19
VPS16-205ENST00000453689 ARNTL2Q8WYA1 636 aa16.26■□□□□ 0.19
VPS16-205ENST00000453689 TGS1Q96RS0 853 aaKnown RBP16.26■□□□□ 0.19
VPS16-205ENST00000453689 GAS2L1Q99501 681 aaPredicted RBP16.26■□□□□ 0.19
VPS16-205ENST00000453689 POLR3FQ9H1D9 316 aaPredicted RBP16.26■□□□□ 0.19
VPS16-205ENST00000453689 BHMT2Q9H2M3 363 aa16.26■□□□□ 0.19
VPS16-205ENST00000453689 MINDY3Q9H8M7 445 aa16.26■□□□□ 0.19
VPS16-205ENST00000453689 GPRC5CQ9NQ84 441 aa16.26■□□□□ 0.19
VPS16-205ENST00000453689 LRFN2Q9ULH4 789 aa16.26■□□□□ 0.19
VPS16-205ENST00000453689 PCDHA7Q9UN72 937 aa16.26■□□□□ 0.19
VPS16-205ENST00000453689 COL6A3P12111 3177 aa16.26■□□□□ 0.19
VPS16-205ENST00000453689 E9PMD0 336 aa16.25■□□□□ 0.19
VPS16-205ENST00000453689 RFXAPO00287 272 aa16.25■□□□□ 0.19
VPS16-205ENST00000453689 SLC26A4O43511 780 aa16.25■□□□□ 0.19
VPS16-205ENST00000453689 GLRA2P23416 452 aa16.25■□□□□ 0.19
VPS16-205ENST00000453689 ERVK-21P61565 698 aa16.25■□□□□ 0.19
VPS16-205ENST00000453689 FAM189BP81408 668 aa16.25■□□□□ 0.19
VPS16-205ENST00000453689 CAPSQ13938 189 aa16.25■□□□□ 0.19
VPS16-205ENST00000453689 ADGRE1Q14246 886 aa16.25■□□□□ 0.19
VPS16-205ENST00000453689 HYIQ5T013 277 aa16.25■□□□□ 0.19
VPS16-205ENST00000453689 AXDND1Q5T1B0 1012 aaPredicted RBP16.25■□□□□ 0.19
VPS16-205ENST00000453689 PADI6Q6TGC4 694 aa16.25■□□□□ 0.19
VPS16-205ENST00000453689 CLEC17AQ6ZS10 378 aa16.25■□□□□ 0.19
VPS16-205ENST00000453689 CATSPER4Q7RTX7 472 aa16.25■□□□□ 0.19
VPS16-205ENST00000453689 KCNK18Q7Z418 384 aa16.25■□□□□ 0.19
VPS16-205ENST00000453689 SRGAP1Q7Z6B7 1085 aa16.25■□□□□ 0.19
VPS16-205ENST00000453689 CABP7Q86V35 215 aa16.25■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms