RNA–Protein interactions for RNA: ENST00000453259.2

LYSMD3-202, Transcript of LysM domain containing 3, humanhuman

TSL 3

Gene LYSMD3, Length 553 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3-202ENST00000453259 ANO2Q9NQ90 1003 aa16.14■□□□□ 0.17
LYSMD3-202ENST00000453259 SAMM50Q9Y512 469 aa16.14■□□□□ 0.17
LYSMD3-202ENST00000453259 CXCL14O95715 111 aa16.13■□□□□ 0.17
LYSMD3-202ENST00000453259 CTSAP10619 480 aa16.13■□□□□ 0.17
LYSMD3-202ENST00000453259 SFPQP23246 707 aaKnown RBP eCLIP16.13■□□□□ 0.17
LYSMD3-202ENST00000453259 PBX3P40426 434 aa16.13■□□□□ 0.17
LYSMD3-202ENST00000453259 JAK3P52333 1124 aa16.13■□□□□ 0.17
LYSMD3-202ENST00000453259 TBC1D8BQ0IIM8 1120 aa16.13■□□□□ 0.17
LYSMD3-202ENST00000453259 JAKMIP3Q5VZ66 844 aa16.13■□□□□ 0.17
LYSMD3-202ENST00000453259 GLB1LQ6UWU2 654 aa16.13■□□□□ 0.17
LYSMD3-202ENST00000453259 OTOP3Q7RTS5 596 aa16.13■□□□□ 0.17
LYSMD3-202ENST00000453259 VPS52Q8N1B4 723 aa16.13■□□□□ 0.17
LYSMD3-202ENST00000453259 HELQQ8TDG4 1101 aa16.13■□□□□ 0.17
LYSMD3-202ENST00000453259 NKD2Q969F2 451 aaPredicted RBP16.13■□□□□ 0.17
LYSMD3-202ENST00000453259 GCOM2Q9BZD3 368 aaPredicted RBP16.13■□□□□ 0.17
LYSMD3-202ENST00000453259 SFXN1Q9H9B4 322 aa16.13■□□□□ 0.17
LYSMD3-202ENST00000453259 CYP26B1Q9NR63 512 aa16.13■□□□□ 0.17
LYSMD3-202ENST00000453259 DISC1Q9NRI5 854 aa16.13■□□□□ 0.17
LYSMD3-202ENST00000453259 DBR1Q9UK59 544 aaKnown RBP16.13■□□□□ 0.17
LYSMD3-202ENST00000453259 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP16.12■□□□□ 0.17
LYSMD3-202ENST00000453259 SP100P23497 879 aaPredicted RBP16.12■□□□□ 0.17
LYSMD3-202ENST00000453259 DNM2P50570 870 aa16.12■□□□□ 0.17
LYSMD3-202ENST00000453259 PRKCEQ02156 737 aa16.12■□□□□ 0.17
LYSMD3-202ENST00000453259 COL9A3Q14050 684 aaPredicted RBP16.12■□□□□ 0.17
LYSMD3-202ENST00000453259 PRR16Q569H4 304 aa16.12■□□□□ 0.17
LYSMD3-202ENST00000453259 C15orf39Q6ZRI6 1047 aa16.12■□□□□ 0.17
LYSMD3-202ENST00000453259 ZNF410Q86VK4 478 aa16.12■□□□□ 0.17
LYSMD3-202ENST00000453259 RNF169Q8NCN4 708 aa16.12■□□□□ 0.17
LYSMD3-202ENST00000453259 CCDC148Q8NFR7 591 aa16.12■□□□□ 0.17
LYSMD3-202ENST00000453259 NLRP7Q8WX94 980 aa16.12■□□□□ 0.17
LYSMD3-202ENST00000453259 BRPF3Q9ULD4 1205 aa16.12■□□□□ 0.17
LYSMD3-202ENST00000453259 NID2Q14112 1375 aa16.12■□□□□ 0.17
LYSMD3-202ENST00000453259 KLF18A0A0U1RQI7 1052 aa16.11■□□□□ 0.17
LYSMD3-202ENST00000453259 ZNF623O75123 536 aa16.11■□□□□ 0.17
LYSMD3-202ENST00000453259 PHKA2P46019 1235 aa16.11■□□□□ 0.17
LYSMD3-202ENST00000453259 METAP2P50579 478 aaKnown RBP eCLIP16.11■□□□□ 0.17
LYSMD3-202ENST00000453259 USP11P51784 963 aa16.11■□□□□ 0.17
LYSMD3-202ENST00000453259 RARS2Q5T160 578 aaKnown RBP16.11■□□□□ 0.17
LYSMD3-202ENST00000453259 ELMSAN1Q6PJG2 1045 aa16.11■□□□□ 0.17
LYSMD3-202ENST00000453259 CYP26C1Q6V0L0 522 aa16.11■□□□□ 0.17
LYSMD3-202ENST00000453259 CCDC149Q6ZUS6 474 aa16.11■□□□□ 0.17
LYSMD3-202ENST00000453259 ASCL5Q7RTU5 278 aa16.11■□□□□ 0.17
LYSMD3-202ENST00000453259 CABP7Q86V35 215 aa16.11■□□□□ 0.17
LYSMD3-202ENST00000453259 LRRC71Q8N4P6 559 aa16.11■□□□□ 0.17
LYSMD3-202ENST00000453259 SLC22A17Q8WUG5 538 aa16.11■□□□□ 0.17
LYSMD3-202ENST00000453259 LENG9Q96B70 501 aa16.11■□□□□ 0.17
LYSMD3-202ENST00000453259 IGSF21Q96ID5 467 aa16.11■□□□□ 0.17
LYSMD3-202ENST00000453259 RTP3Q9BQQ7 232 aa16.11■□□□□ 0.17
LYSMD3-202ENST00000453259 RHOBTB2Q9BYZ6 727 aa16.11■□□□□ 0.17
LYSMD3-202ENST00000453259 SEMA4AQ9H3S1 761 aa16.11■□□□□ 0.17
LYSMD3-202ENST00000453259 FAM217BQ9NTX9 383 aaPredicted RBP16.11■□□□□ 0.17
LYSMD3-202ENST00000453259 DPP7Q9UHL4 492 aa16.11■□□□□ 0.17
LYSMD3-202ENST00000453259 DENND4AQ7Z401 1863 aa16.11■□□□□ 0.17
LYSMD3-202ENST00000453259 PTPRZ1P23471 2315 aaPredicted RBP16.11■□□□□ 0.17
LYSMD3-202ENST00000453259 ZNF862O60290 1169 aa16.1■□□□□ 0.17
LYSMD3-202ENST00000453259 ZC3H11AO75152 810 aaKnown RBP eCLIP16.1■□□□□ 0.17
LYSMD3-202ENST00000453259 AOC1P19801 751 aa16.1■□□□□ 0.17
LYSMD3-202ENST00000453259 CA8P35219 290 aa16.1■□□□□ 0.17
LYSMD3-202ENST00000453259 TDGQ13569 410 aa16.1■□□□□ 0.17
LYSMD3-202ENST00000453259 TARBP2Q15633 366 aaKnown RBP16.1■□□□□ 0.17
LYSMD3-202ENST00000453259 GPR149Q86SP6 731 aa16.1■□□□□ 0.17
LYSMD3-202ENST00000453259 JPH2Q9BR39 696 aaPredicted RBP16.1■□□□□ 0.17
LYSMD3-202ENST00000453259 EMILIN2Q9BXX0 1053 aa16.1■□□□□ 0.17
LYSMD3-202ENST00000453259 NIFKQ9BYG3 293 aaKnown RBP16.1■□□□□ 0.17
LYSMD3-202ENST00000453259 C22orf23Q9BZE7 217 aa16.1■□□□□ 0.17
LYSMD3-202ENST00000453259 IGSF9Q9P2J2 1179 aa16.1■□□□□ 0.17
LYSMD3-202ENST00000453259 LIMD1Q9UGP4 676 aa16.1■□□□□ 0.17
LYSMD3-202ENST00000453259 FAM186AA6NE01 2351 aa16.09■□□□□ 0.17
LYSMD3-202ENST00000453259 RIF1Q5UIP0 2472 aaKnown RBP16.09■□□□□ 0.17
LYSMD3-202ENST00000453259 IGKV6-21A0A0C4DH24 114 aa16.09■□□□□ 0.17
LYSMD3-202ENST00000453259 PRPF3O43395 683 aaKnown RBP16.09■□□□□ 0.17
LYSMD3-202ENST00000453259 GAS7O60861 476 aa16.09■□□□□ 0.17
LYSMD3-202ENST00000453259 CDC27P30260 824 aa16.09■□□□□ 0.17
LYSMD3-202ENST00000453259 NONOQ15233 471 aaKnown RBP eCLIP16.09■□□□□ 0.17
LYSMD3-202ENST00000453259 XKR3Q5GH77 459 aa16.09■□□□□ 0.17
LYSMD3-202ENST00000453259 NOMO2Q5JPE7 1267 aa16.09■□□□□ 0.17
LYSMD3-202ENST00000453259 TWF2Q6IBS0 349 aaKnown RBP16.09■□□□□ 0.17
LYSMD3-202ENST00000453259 SLC5A5Q92911 643 aa16.09■□□□□ 0.17
LYSMD3-202ENST00000453259 PGBD4Q96DM1 585 aa16.09■□□□□ 0.17
LYSMD3-202ENST00000453259 TEKT3Q9BXF9 490 aa16.09■□□□□ 0.17
LYSMD3-202ENST00000453259 TBC1D13Q9NVG8 400 aa16.09■□□□□ 0.17
LYSMD3-202ENST00000453259 KANSL3Q9P2N6 904 aa16.09■□□□□ 0.17
LYSMD3-202ENST00000453259 DUSP12Q9UNI6 340 aa16.09■□□□□ 0.17
LYSMD3-202ENST00000453259 SSX2IPQ9Y2D8 614 aa16.09■□□□□ 0.17
LYSMD3-202ENST00000453259 MYO15AQ9UKN7 3530 aa16.08■□□□□ 0.17
LYSMD3-202ENST00000453259 C1RP00736 705 aa16.08■□□□□ 0.16
LYSMD3-202ENST00000453259 ASGR2P07307 311 aa16.08■□□□□ 0.16
LYSMD3-202ENST00000453259 GALTP07902 379 aa16.08■□□□□ 0.16
LYSMD3-202ENST00000453259 EPCAMP16422 314 aa16.08■□□□□ 0.16
LYSMD3-202ENST00000453259 FGD1P98174 961 aa16.08■□□□□ 0.16
LYSMD3-202ENST00000453259 AKAP17AQ02040 695 aaKnown RBP16.08■□□□□ 0.16
LYSMD3-202ENST00000453259 RNASELQ05823 741 aaKnown RBP16.08■□□□□ 0.16
LYSMD3-202ENST00000453259 PTPN14Q15678 1187 aa16.08■□□□□ 0.16
LYSMD3-202ENST00000453259 LRCH2Q5VUJ6 765 aa16.08■□□□□ 0.16
LYSMD3-202ENST00000453259 TRMT1LQ7Z2T5 733 aaKnown RBP16.08■□□□□ 0.16
LYSMD3-202ENST00000453259 EXOC8Q8IYI6 725 aa16.08■□□□□ 0.16
LYSMD3-202ENST00000453259 CCDC105Q8IYK2 499 aa16.08■□□□□ 0.16
LYSMD3-202ENST00000453259 FAM177A1Q8N128 213 aaPredicted RBP16.08■□□□□ 0.16
LYSMD3-202ENST00000453259 FBXL16Q8N461 479 aa16.08■□□□□ 0.16
LYSMD3-202ENST00000453259 CMASQ8NFW8 434 aaPredicted RBP16.08■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms