RNA–Protein interactions for RNA: ENST00000453091.6

RIF1-206, Transcript of replication timing regulatory factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RIF1, Length 8,053 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-206ENST00000453091 PPP1R37O75864 691 aa8.31□□□□□ -1.08
RIF1-206ENST00000453091 SASH3O75995 380 aa8.31□□□□□ -1.08
RIF1-206ENST00000453091 KRT17Q04695 432 aa8.31□□□□□ -1.08
RIF1-206ENST00000453091 ITPK1Q13572 414 aa8.31□□□□□ -1.08
RIF1-206ENST00000453091 RBBP5Q15291 538 aaKnown RBP8.31□□□□□ -1.08
RIF1-206ENST00000453091 SPOPLQ6IQ16 392 aa8.31□□□□□ -1.08
RIF1-206ENST00000453091 ADGRF4Q8IZF3 695 aa8.31□□□□□ -1.08
RIF1-206ENST00000453091 FBXO41Q8TF61 875 aa8.31□□□□□ -1.08
RIF1-206ENST00000453091 PPWD1Q96BP3 646 aaKnown RBP8.31□□□□□ -1.08
RIF1-206ENST00000453091 CPS1P31327 1500 aa8.3□□□□□ -1.08
RIF1-206ENST00000453091 GPC4O75487 556 aa8.3□□□□□ -1.08
RIF1-206ENST00000453091 HNRNPH1P31943 449 aaKnown RBP8.3□□□□□ -1.08
RIF1-206ENST00000453091 TSTA3Q13630 321 aaPredicted RBP8.3□□□□□ -1.08
RIF1-206ENST00000453091 ZC2HC1CQ53FD0 456 aaPredicted RBP8.3□□□□□ -1.08
RIF1-206ENST00000453091 CCDC137Q6PK04 289 aaKnown RBP8.3□□□□□ -1.08
RIF1-206ENST00000453091 PACSIN1Q9BY11 444 aa8.3□□□□□ -1.08
RIF1-206ENST00000453091 AS3MTQ9HBK9 375 aa8.3□□□□□ -1.08
RIF1-206ENST00000453091 SUFUQ9UMX1 484 aa8.3□□□□□ -1.08
RIF1-206ENST00000453091 CLTCL1P53675 1640 aa8.3□□□□□ -1.08
RIF1-206ENST00000453091 CPA2P48052 419 aa8.3□□□□□ -1.08
RIF1-206ENST00000453091 NACC1Q96RE7 527 aa8.3□□□□□ -1.08
RIF1-206ENST00000453091 SLC13A1Q9BZW2 595 aa8.3□□□□□ -1.08
RIF1-206ENST00000453091 ADGBQ8N7X0 1667 aa8.3□□□□□ -1.08
RIF1-206ENST00000453091 CLDN3O15551 220 aa8.3□□□□□ -1.08
RIF1-206ENST00000453091 DKC1O60832 514 aaKnown RBP eCLIP8.3□□□□□ -1.08
RIF1-206ENST00000453091 RANBP1P43487 201 aa8.3□□□□□ -1.08
RIF1-206ENST00000453091 RFX5P48382 616 aaPredicted RBP8.3□□□□□ -1.08
RIF1-206ENST00000453091 PSMD2Q13200 908 aa8.3□□□□□ -1.08
RIF1-206ENST00000453091 TMEM270Q6UE05 265 aa8.3□□□□□ -1.08
RIF1-206ENST00000453091 CDAN1Q8IWY9 1227 aa8.3□□□□□ -1.08
RIF1-206ENST00000453091 CASKIN2Q8WXE0 1202 aa8.3□□□□□ -1.08
RIF1-206ENST00000453091 ZSCAN5CA6NGD5 496 aaPredicted RBP8.3□□□□□ -1.08
RIF1-206ENST00000453091 SMIM22K7EJ46 135 aa8.3□□□□□ -1.08
RIF1-206ENST00000453091 KLRC1P26715 233 aa8.3□□□□□ -1.08
RIF1-206ENST00000453091 IRAK1P51617 712 aa8.3□□□□□ -1.08
RIF1-206ENST00000453091 TRMT10CQ7L0Y3 403 aaKnown RBP8.3□□□□□ -1.08
RIF1-206ENST00000453091 PPM1NQ8N819 430 aa8.3□□□□□ -1.08
RIF1-206ENST00000453091 DNAAF3Q8N9W5 541 aa8.3□□□□□ -1.08
RIF1-206ENST00000453091 LRGUKQ96M69 825 aa8.3□□□□□ -1.08
RIF1-206ENST00000453091 RNF14Q9UBS8 474 aa8.3□□□□□ -1.08
RIF1-206ENST00000453091 HEY1Q9Y5J3 304 aa8.3□□□□□ -1.08
RIF1-206ENST00000453091 MEFVO15553 781 aaPredicted RBP8.3□□□□□ -1.08
RIF1-206ENST00000453091 HAUS5O94927 633 aa8.3□□□□□ -1.08
RIF1-206ENST00000453091 STAT2P52630 851 aa8.3□□□□□ -1.08
RIF1-206ENST00000453091 BIRC2Q13490 618 aa8.3□□□□□ -1.08
RIF1-206ENST00000453091 C1orf228Q6PIY5 440 aa8.3□□□□□ -1.08
RIF1-206ENST00000453091 TRIM59Q8IWR1 403 aa8.3□□□□□ -1.08
RIF1-206ENST00000453091 PPIL4Q8WUA2 492 aaKnown RBP eCLIP8.3□□□□□ -1.082e-6■■□□□ 13.3
RIF1-206ENST00000453091 NLRP4Q96MN2 994 aa8.3□□□□□ -1.08
RIF1-206ENST00000453091 MSTO1Q9BUK6 570 aa8.3□□□□□ -1.08
RIF1-206ENST00000453091 SLC40A1Q9NP59 571 aa8.3□□□□□ -1.08
RIF1-206ENST00000453091 HESX1Q9UBX0 185 aa8.3□□□□□ -1.08
RIF1-206ENST00000453091 KIF3CO14782 793 aa8.3□□□□□ -1.08
RIF1-206ENST00000453091 GYG2O15488 501 aa8.3□□□□□ -1.08
RIF1-206ENST00000453091 FOSP01100 380 aaPredicted RBP8.3□□□□□ -1.08
RIF1-206ENST00000453091 PSMA2P25787 234 aa8.3□□□□□ -1.08
RIF1-206ENST00000453091 QRICH1Q2TAL8 776 aa8.3□□□□□ -1.08
RIF1-206ENST00000453091 PPP1R18Q6NYC8 613 aa8.3□□□□□ -1.08
RIF1-206ENST00000453091 DPP9Q86TI2 863 aa8.3□□□□□ -1.08
RIF1-206ENST00000453091 CPA5Q8WXQ8 436 aa8.3□□□□□ -1.08
RIF1-206ENST00000453091 SLURP2P0DP57 97 aa8.29□□□□□ -1.08
RIF1-206ENST00000453091 SRGNP10124 158 aa8.29□□□□□ -1.08
RIF1-206ENST00000453091 PDHBP11177 359 aa8.29□□□□□ -1.08
RIF1-206ENST00000453091 YY1P25490 414 aa8.29□□□□□ -1.08
RIF1-206ENST00000453091 PDIA6Q15084 440 aa8.29□□□□□ -1.08
RIF1-206ENST00000453091 CC2D2BQ6DHV5 1058 aa8.29□□□□□ -1.08
RIF1-206ENST00000453091 PADI6Q6TGC4 694 aa8.29□□□□□ -1.08
RIF1-206ENST00000453091 PNPLA6Q8IY17 1366 aa8.29□□□□□ -1.08
RIF1-206ENST00000453091 MARCOQ9UEW3 520 aaPredicted RBP8.29□□□□□ -1.08
RIF1-206ENST00000453091 HERVK_113P62684 666 aa8.29□□□□□ -1.08
RIF1-206ENST00000453091 GPC5P78333 572 aa8.29□□□□□ -1.08
RIF1-206ENST00000453091 RINT1Q6NUQ1 792 aa8.29□□□□□ -1.08
RIF1-206ENST00000453091 SLC35G2Q8TBE7 412 aa8.29□□□□□ -1.08
RIF1-206ENST00000453091 CCDC124Q96CT7 223 aaKnown RBP8.29□□□□□ -1.08
RIF1-206ENST00000453091 ANKZF1Q9H8Y5 726 aa8.29□□□□□ -1.08
RIF1-206ENST00000453091 ADAM22Q9P0K1 906 aa8.29□□□□□ -1.08
RIF1-206ENST00000453091 CAPN6Q9Y6Q1 641 aa8.29□□□□□ -1.08
RIF1-206ENST00000453091 SPDYE16A6NNV3 312 aaPredicted RBP8.29□□□□□ -1.08
RIF1-206ENST00000453091 MAPK13O15264 365 aa8.29□□□□□ -1.08
RIF1-206ENST00000453091 KNOP1Q1ED39 458 aaKnown RBP8.29□□□□□ -1.08
RIF1-206ENST00000453091 TSGA10IPQ3SY00 556 aa8.29□□□□□ -1.08
RIF1-206ENST00000453091 SPDYE2Q495Y8 402 aa8.29□□□□□ -1.08
RIF1-206ENST00000453091 IZUMO3Q5VZ72 239 aa8.29□□□□□ -1.08
RIF1-206ENST00000453091 LONP2Q86WA8 852 aa8.29□□□□□ -1.08
RIF1-206ENST00000453091 VPS11Q9H270 941 aa8.29□□□□□ -1.08
RIF1-206ENST00000453091 XAB2Q9HCS7 855 aaKnown RBP8.29□□□□□ -1.08
RIF1-206ENST00000453091 TULP4Q9NRJ4 1543 aa8.29□□□□□ -1.08
RIF1-206ENST00000453091 MCF2LO15068 1137 aa8.29□□□□□ -1.08
RIF1-206ENST00000453091 NOP14P78316 857 aaKnown RBP8.29□□□□□ -1.08
RIF1-206ENST00000453091 ZBTB41Q5SVQ8 909 aa8.29□□□□□ -1.08
RIF1-206ENST00000453091 GPATCH4Q5T3I0 446 aaKnown RBP8.29□□□□□ -1.08
RIF1-206ENST00000453091 DGKHQ86XP1 1220 aa8.29□□□□□ -1.08
RIF1-206ENST00000453091 NGRNQ9NPE2 291 aaKnown RBP8.29□□□□□ -1.08
RIF1-206ENST00000453091 EMSYQ7Z589 1322 aa8.29□□□□□ -1.08
RIF1-206ENST00000453091 MAP3K4Q9Y6R4 1608 aa8.29□□□□□ -1.08
RIF1-206ENST00000453091 PPP2R5EQ16537 467 aa8.29□□□□□ -1.08
RIF1-206ENST00000453091 SPZ1Q9BXG8 430 aa8.29□□□□□ -1.08
RIF1-206ENST00000453091 BARHL2Q9NY43 387 aa8.29□□□□□ -1.08
RIF1-206ENST00000453091 GIPC1O14908 333 aa8.29□□□□□ -1.08
RIF1-206ENST00000453091 CDC25CP30307 473 aa8.29□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms