RNA–Protein interactions for RNA: ENST00000452067.1

NUCKS1P1-201, Transcript of nuclear casein kinase and cyclin dependent kinase substrate 1 pseudogene 1, humanhuman

BASIC

Gene NUCKS1P1, Length 703 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUCKS1P1-201ENST00000452067 SF3B3Q15393 1217 aaKnown RBP8.72□□□□□ -1.01
NUCKS1P1-201ENST00000452067 PUM3Q15397 648 aaKnown RBP8.72□□□□□ -1.01
NUCKS1P1-201ENST00000452067 SF1Q15637 639 aaKnown RBP8.72□□□□□ -1.01
NUCKS1P1-201ENST00000452067 SLC10A5Q5PT55 438 aa8.72□□□□□ -1.01
NUCKS1P1-201ENST00000452067 TTC39AQ5SRH9 613 aa8.72□□□□□ -1.01
NUCKS1P1-201ENST00000452067 CWC27Q6UX04 472 aaKnown RBP8.72□□□□□ -1.01
NUCKS1P1-201ENST00000452067 LRRC56Q8IYG6 542 aaPredicted RBP8.72□□□□□ -1.01
NUCKS1P1-201ENST00000452067 KBTBD3Q8NAB2 608 aa8.72□□□□□ -1.01
NUCKS1P1-201ENST00000452067 MPHOSPH8Q99549 860 aa8.72□□□□□ -1.01
NUCKS1P1-201ENST00000452067 LSG1Q9H089 658 aaKnown RBP8.72□□□□□ -1.01
NUCKS1P1-201ENST00000452067 PAG1Q9NWQ8 432 aa8.72□□□□□ -1.01
NUCKS1P1-201ENST00000452067 CHMP5Q9NZZ3 219 aa8.72□□□□□ -1.01
NUCKS1P1-201ENST00000452067 CCDC171Q6TFL3 1326 aa8.72□□□□□ -1.01
NUCKS1P1-201ENST00000452067 MED23Q9ULK4 1368 aa8.72□□□□□ -1.01
NUCKS1P1-201ENST00000452067 DOCK2Q92608 1830 aa8.71□□□□□ -1.01
NUCKS1P1-201ENST00000452067 A0A1W2PQU0 124 aa8.71□□□□□ -1.02
NUCKS1P1-201ENST00000452067 ARNTLO00327 626 aa8.71□□□□□ -1.02
NUCKS1P1-201ENST00000452067 PDE8BO95263 885 aa8.71□□□□□ -1.02
NUCKS1P1-201ENST00000452067 SLC5A1P13866 664 aa8.71□□□□□ -1.02
NUCKS1P1-201ENST00000452067 ZKSCAN1P17029 563 aaPredicted RBP8.71□□□□□ -1.02
NUCKS1P1-201ENST00000452067 ATP2B1P20020 1258 aa8.71□□□□□ -1.02
NUCKS1P1-201ENST00000452067 RFC4P35249 363 aa8.71□□□□□ -1.02
NUCKS1P1-201ENST00000452067 GFRA1P56159 465 aa8.71□□□□□ -1.02
NUCKS1P1-201ENST00000452067 TTF1Q15361 905 aaPredicted RBP8.71□□□□□ -1.02
NUCKS1P1-201ENST00000452067 INF2Q27J81 1249 aa8.71□□□□□ -1.02
NUCKS1P1-201ENST00000452067 ZSCAN25Q6NSZ9 544 aa8.71□□□□□ -1.02
NUCKS1P1-201ENST00000452067 CKAP2LQ8IYA6 745 aa8.71□□□□□ -1.02
NUCKS1P1-201ENST00000452067 KREMEN2Q8NCW0 462 aa8.71□□□□□ -1.02
NUCKS1P1-201ENST00000452067 LPIN2Q92539 896 aa8.71□□□□□ -1.02
NUCKS1P1-201ENST00000452067 DPF3Q92784 378 aa8.71□□□□□ -1.02
NUCKS1P1-201ENST00000452067 CCDC140Q96MF4 163 aa8.71□□□□□ -1.02
NUCKS1P1-201ENST00000452067 DNAJC2Q99543 621 aaKnown RBP8.71□□□□□ -1.02
NUCKS1P1-201ENST00000452067 PUS3Q9BZE2 481 aaKnown RBP8.71□□□□□ -1.02
NUCKS1P1-201ENST00000452067 HELLSQ9NRZ9 838 aa8.71□□□□□ -1.02
NUCKS1P1-201ENST00000452067 HMG20BQ9P0W2 317 aa8.71□□□□□ -1.02
NUCKS1P1-201ENST00000452067 MYH13Q9UKX3 1938 aa8.71□□□□□ -1.02
NUCKS1P1-201ENST00000452067 CARMIL3Q8ND23 1372 aa8.71□□□□□ -1.02
NUCKS1P1-201ENST00000452067 AGRPO00253 132 aa8.7□□□□□ -1.02
NUCKS1P1-201ENST00000452067 N4BP3O15049 544 aa8.7□□□□□ -1.02
NUCKS1P1-201ENST00000452067 ECI1P42126 302 aa8.7□□□□□ -1.02
NUCKS1P1-201ENST00000452067 TIMM10P62072 90 aa8.7□□□□□ -1.02
NUCKS1P1-201ENST00000452067 PPP2R2AP63151 447 aa8.7□□□□□ -1.02
NUCKS1P1-201ENST00000452067 ZC3H14Q6PJT7 736 aaKnown RBP8.7□□□□□ -1.02
NUCKS1P1-201ENST00000452067 LDHDQ86WU2 507 aa8.7□□□□□ -1.02
NUCKS1P1-201ENST00000452067 NBPF5PQ86XG9 351 aaPredicted RBP8.7□□□□□ -1.02
NUCKS1P1-201ENST00000452067 ANKRD18AQ8IVF6 992 aa8.7□□□□□ -1.02
NUCKS1P1-201ENST00000452067 CCDC103Q8IW40 242 aa8.7□□□□□ -1.02
NUCKS1P1-201ENST00000452067 SYNE4Q8N205 404 aa8.7□□□□□ -1.02
NUCKS1P1-201ENST00000452067 VGLL2Q8N8G2 317 aa8.7□□□□□ -1.02
NUCKS1P1-201ENST00000452067 MZB1Q8WU39 189 aa8.7□□□□□ -1.02
NUCKS1P1-201ENST00000452067 C1orf159Q96HA4 380 aa8.7□□□□□ -1.02
NUCKS1P1-201ENST00000452067 TRIM55Q9BYV6 548 aa8.7□□□□□ -1.02
NUCKS1P1-201ENST00000452067 TM6SF1Q9BZW5 370 aa8.7□□□□□ -1.02
NUCKS1P1-201ENST00000452067 DDX24Q9GZR7 859 aaKnown RBP eCLIP8.7□□□□□ -1.02
NUCKS1P1-201ENST00000452067 TMEFF2Q9UIK5 374 aaPredicted RBP8.7□□□□□ -1.02
NUCKS1P1-201ENST00000452067 HCFC2Q9Y5Z7 792 aa8.7□□□□□ -1.02
NUCKS1P1-201ENST00000452067 CPP00450 1065 aa8.69□□□□□ -1.02
NUCKS1P1-201ENST00000452067 PSMA5P28066 241 aa8.69□□□□□ -1.02
NUCKS1P1-201ENST00000452067 GRIA2P42262 883 aa8.69□□□□□ -1.02
NUCKS1P1-201ENST00000452067 KCNJ4P48050 445 aa8.69□□□□□ -1.02
NUCKS1P1-201ENST00000452067 KRT32Q14532 448 aa8.69□□□□□ -1.02
NUCKS1P1-201ENST00000452067 SSPNQ14714 243 aa8.69□□□□□ -1.02
NUCKS1P1-201ENST00000452067 TESK1Q15569 626 aa8.69□□□□□ -1.02
NUCKS1P1-201ENST00000452067 PRSS53Q2L4Q9 553 aa8.69□□□□□ -1.02
NUCKS1P1-201ENST00000452067 MCMDC2Q4G0Z9 681 aa8.69□□□□□ -1.02
NUCKS1P1-201ENST00000452067 ACBD5Q5T8D3 534 aaPredicted RBP8.69□□□□□ -1.02
NUCKS1P1-201ENST00000452067 TBC1D9BQ66K14 1250 aa8.69□□□□□ -1.02
NUCKS1P1-201ENST00000452067 E4F1Q66K89 784 aaPredicted RBP8.69□□□□□ -1.02
NUCKS1P1-201ENST00000452067 IGDCC3Q8IVU1 814 aa8.69□□□□□ -1.02
NUCKS1P1-201ENST00000452067 TMEM145Q8NBT3 493 aa8.69□□□□□ -1.02
NUCKS1P1-201ENST00000452067 ST13P5Q8NFI4 369 aaPredicted RBP8.69□□□□□ -1.02
NUCKS1P1-201ENST00000452067 MAP4K1Q92918 833 aa8.69□□□□□ -1.02
NUCKS1P1-201ENST00000452067 SLKQ9H2G2 1235 aaPredicted RBP8.69□□□□□ -1.02
NUCKS1P1-201ENST00000452067 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP8.69□□□□□ -1.02
NUCKS1P1-201ENST00000452067 MSRB2Q9Y3D2 182 aa8.69□□□□□ -1.02
NUCKS1P1-201ENST00000452067 PCDHA5Q9Y5H7 936 aa8.69□□□□□ -1.02
NUCKS1P1-201ENST00000452067 A0A0D9SFI3 127 aa8.68□□□□□ -1.02
NUCKS1P1-201ENST00000452067 ZC3H12DA2A288 527 aaKnown RBP8.68□□□□□ -1.02
NUCKS1P1-201ENST00000452067 F8W031 263 aaPredicted RBP8.68□□□□□ -1.02
NUCKS1P1-201ENST00000452067 GOLIM4O00461 696 aa8.68□□□□□ -1.02
NUCKS1P1-201ENST00000452067 PLSCR1O15162 318 aa8.68□□□□□ -1.02
NUCKS1P1-201ENST00000452067 FGFR2P21802 821 aa8.68□□□□□ -1.02
NUCKS1P1-201ENST00000452067 NEK4P51957 841 aa8.68□□□□□ -1.02
NUCKS1P1-201ENST00000452067 RBM10P98175 930 aaKnown RBP8.68□□□□□ -1.02
NUCKS1P1-201ENST00000452067 IQCEQ6IPM2 695 aa8.68□□□□□ -1.02
NUCKS1P1-201ENST00000452067 DENND5AQ6IQ26 1287 aa8.68□□□□□ -1.02
NUCKS1P1-201ENST00000452067 DDX46Q7L014 1031 aaKnown RBP8.68□□□□□ -1.02
NUCKS1P1-201ENST00000452067 PTF1AQ7RTS3 328 aa8.68□□□□□ -1.02
NUCKS1P1-201ENST00000452067 CABP7Q86V35 215 aa8.68□□□□□ -1.02
NUCKS1P1-201ENST00000452067 SGSM3Q96HU1 749 aa8.68□□□□□ -1.02
NUCKS1P1-201ENST00000452067 SIGLEC10Q96LC7 697 aa8.68□□□□□ -1.02
NUCKS1P1-201ENST00000452067 FAM227BQ96M60 508 aa8.68□□□□□ -1.02
NUCKS1P1-201ENST00000452067 KRTAP9-9Q9BYP9 154 aa8.68□□□□□ -1.02
NUCKS1P1-201ENST00000452067 KRTAP9-4Q9BYQ2 154 aa8.68□□□□□ -1.02
NUCKS1P1-201ENST00000452067 IRS2Q9Y4H2 1338 aa8.68□□□□□ -1.02
NUCKS1P1-201ENST00000452067 TNS1Q9HBL0 1735 aaKnown RBP8.68□□□□□ -1.02
NUCKS1P1-201ENST00000452067 NPHP1O15259 732 aa8.67□□□□□ -1.02
NUCKS1P1-201ENST00000452067 RNF113AO15541 343 aaKnown RBP8.67□□□□□ -1.02
NUCKS1P1-201ENST00000452067 IGSF3O75054 1194 aa8.67□□□□□ -1.02
NUCKS1P1-201ENST00000452067 PTMSP20962 102 aa8.67□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms