RNA–Protein interactions for RNA: ENST00000452013.5

COL8A1-203, Transcript of collagen type VIII alpha 1 chain, humanhuman

TSL 2

Gene COL8A1, Length 659 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-203ENST00000452013 POLR3FQ9H1D9 316 aaPredicted RBP9.85□□□□□ -0.83
COL8A1-203ENST00000452013 TSPYL2Q9H2G4 693 aaPredicted RBP9.85□□□□□ -0.83
COL8A1-203ENST00000452013 XPNPEP1Q9NQW7 623 aa9.85□□□□□ -0.83
COL8A1-203ENST00000452013 RGS18Q9NS28 235 aa9.85□□□□□ -0.83
COL8A1-203ENST00000452013 LRFN2Q9ULH4 789 aa9.85□□□□□ -0.83
COL8A1-203ENST00000452013 PCDHB7Q9Y5E2 793 aa9.85□□□□□ -0.83
COL8A1-203ENST00000452013 CUTAO60888 179 aa9.84□□□□□ -0.83
COL8A1-203ENST00000452013 SSBP05455 408 aaKnown RBP eCLIP9.84□□□□□ -0.83
COL8A1-203ENST00000452013 PLA2G4BP0C869 781 aa9.84□□□□□ -0.83
COL8A1-203ENST00000452013 GLRA2P23416 452 aa9.84□□□□□ -0.83
COL8A1-203ENST00000452013 DNAJB2P25686 324 aa9.84□□□□□ -0.83
COL8A1-203ENST00000452013 PBX2P40425 430 aa9.84□□□□□ -0.83
COL8A1-203ENST00000452013 SARSP49591 514 aaKnown RBP9.84□□□□□ -0.83
COL8A1-203ENST00000452013 RABGGTBP53611 331 aa9.84□□□□□ -0.83
COL8A1-203ENST00000452013 PTENP60484 403 aa9.84□□□□□ -0.83
COL8A1-203ENST00000452013 FAM189BP81408 668 aa9.84□□□□□ -0.83
COL8A1-203ENST00000452013 GRIN1Q05586 938 aa9.84□□□□□ -0.83
COL8A1-203ENST00000452013 PKP1Q13835 747 aa9.84□□□□□ -0.83
COL8A1-203ENST00000452013 TMEM119Q4V9L6 283 aa9.84□□□□□ -0.83
COL8A1-203ENST00000452013 RRAGBQ5VZM2 374 aa9.84□□□□□ -0.83
COL8A1-203ENST00000452013 FAM117BQ6P1L5 589 aa9.84□□□□□ -0.83
COL8A1-203ENST00000452013 CATSPER4Q7RTX7 472 aa9.84□□□□□ -0.83
COL8A1-203ENST00000452013 ZBTB8OSQ8IWT0 167 aa9.84□□□□□ -0.83
COL8A1-203ENST00000452013 CLIC6Q96NY7 704 aa9.84□□□□□ -0.83
COL8A1-203ENST00000452013 NFKBIZQ9BYH8 718 aa9.84□□□□□ -0.83
COL8A1-203ENST00000452013 C2orf40Q9H1Z8 148 aa9.84□□□□□ -0.83
COL8A1-203ENST00000452013 TMX1Q9H3N1 280 aa9.84□□□□□ -0.83
COL8A1-203ENST00000452013 SEMA6BQ9H3T3 888 aa9.84□□□□□ -0.83
COL8A1-203ENST00000452013 IFT122Q9HBG6 1241 aa9.84□□□□□ -0.83
COL8A1-203ENST00000452013 DACT1Q9NYF0 836 aa9.84□□□□□ -0.83
COL8A1-203ENST00000452013 KCND2Q9NZV8 630 aa9.84□□□□□ -0.83
COL8A1-203ENST00000452013 RCOR1Q9UKL0 485 aa9.84□□□□□ -0.83
COL8A1-203ENST00000452013 MYH7BA7E2Y1 1941 aa9.84□□□□□ -0.83
COL8A1-203ENST00000452013 ALPK3Q96L96 1907 aa9.84□□□□□ -0.83
COL8A1-203ENST00000452013 INO80B-WBP1J3KQ70 363 aa9.83□□□□□ -0.84
COL8A1-203ENST00000452013 CSDE1O75534 798 aaKnown RBP9.83□□□□□ -0.84
COL8A1-203ENST00000452013 SKIP12755 728 aa9.83□□□□□ -0.84
COL8A1-203ENST00000452013 GUCY2CP25092 1073 aa9.83□□□□□ -0.84
COL8A1-203ENST00000452013 AXLP30530 894 aa9.83□□□□□ -0.84
COL8A1-203ENST00000452013 KRT85P78386 507 aa9.83□□□□□ -0.84
COL8A1-203ENST00000452013 HTRA4P83105 476 aaPredicted RBP9.83□□□□□ -0.84
COL8A1-203ENST00000452013 DNM1Q05193 864 aaKnown RBP9.83□□□□□ -0.84
COL8A1-203ENST00000452013 DSC3Q14574 896 aa9.83□□□□□ -0.84
COL8A1-203ENST00000452013 KARSQ15046 597 aaKnown RBP9.83□□□□□ -0.84
COL8A1-203ENST00000452013 SPECC1Q5M775 1068 aa9.83□□□□□ -0.84
COL8A1-203ENST00000452013 RINT1Q6NUQ1 792 aa9.83□□□□□ -0.84
COL8A1-203ENST00000452013 CCDC73Q6ZRK6 1079 aa9.83□□□□□ -0.84
COL8A1-203ENST00000452013 C1orf186Q6ZWK4 172 aa9.83□□□□□ -0.84
COL8A1-203ENST00000452013 IFNLR1Q8IU57 520 aaPredicted RBP9.83□□□□□ -0.84
COL8A1-203ENST00000452013 NPAS4Q8IUM7 802 aa9.83□□□□□ -0.84
COL8A1-203ENST00000452013 DEFB123Q8N688 67 aa9.83□□□□□ -0.84
COL8A1-203ENST00000452013 DEPTORQ8TB45 409 aa9.83□□□□□ -0.84
COL8A1-203ENST00000452013 ASAP3Q8TDY4 903 aa9.83□□□□□ -0.84
COL8A1-203ENST00000452013 SYMPKQ92797 1274 aaKnown RBP9.83□□□□□ -0.84
COL8A1-203ENST00000452013 EPSTI1Q96J88 318 aa9.83□□□□□ -0.84
COL8A1-203ENST00000452013 DRC1Q96MC2 740 aa9.83□□□□□ -0.84
COL8A1-203ENST00000452013 YME1L1Q96TA2 773 aa9.83□□□□□ -0.84
COL8A1-203ENST00000452013 NKX2-4Q9H2Z4 354 aa9.83□□□□□ -0.84
COL8A1-203ENST00000452013 ZNF576Q9H609 170 aa9.83□□□□□ -0.84
COL8A1-203ENST00000452013 ELAC1Q9H777 363 aaKnown RBP9.83□□□□□ -0.84
COL8A1-203ENST00000452013 C17orf75Q9HAS0 396 aa9.83□□□□□ -0.84
COL8A1-203ENST00000452013 GPRC5CQ9NQ84 441 aa9.83□□□□□ -0.84
COL8A1-203ENST00000452013 CIZ1Q9ULV3 898 aaPredicted RBP9.83□□□□□ -0.84
COL8A1-203ENST00000452013 ZDHHC9Q9Y397 364 aa9.83□□□□□ -0.84
COL8A1-203ENST00000452013 A0A0U1RQF3 1178 aa9.82□□□□□ -0.84
COL8A1-203ENST00000452013 LRRIQ4A6NIV6 560 aa9.82□□□□□ -0.84
COL8A1-203ENST00000452013 C9IYK1 514 aa9.82□□□□□ -0.84
COL8A1-203ENST00000452013 HOXA2O43364 376 aa9.82□□□□□ -0.84
COL8A1-203ENST00000452013 ERLIN2O94905 339 aa9.82□□□□□ -0.84
COL8A1-203ENST00000452013 EOMESO95936 686 aa9.82□□□□□ -0.84
COL8A1-203ENST00000452013 KRT18P05783 430 aaKnown RBP9.82□□□□□ -0.84
COL8A1-203ENST00000452013 PLCG1P19174 1290 aa9.82□□□□□ -0.84
COL8A1-203ENST00000452013 NCLP19338 710 aaKnown RBP9.82□□□□□ -0.84
COL8A1-203ENST00000452013 FGFR4P22455 802 aa9.82□□□□□ -0.84
COL8A1-203ENST00000452013 NAMPTP43490 491 aa9.82□□□□□ -0.84
COL8A1-203ENST00000452013 ME1P48163 572 aa9.82□□□□□ -0.84
COL8A1-203ENST00000452013 EFNA5P52803 228 aa9.82□□□□□ -0.84
COL8A1-203ENST00000452013 SMTNP53814 917 aa9.82□□□□□ -0.84
COL8A1-203ENST00000452013 SLC12A3P55017 1021 aa9.82□□□□□ -0.84
COL8A1-203ENST00000452013 CAPSQ13938 189 aa9.82□□□□□ -0.84
COL8A1-203ENST00000452013 DHX8Q14562 1220 aaKnown RBP9.82□□□□□ -0.84
COL8A1-203ENST00000452013 PPP2R2DQ66LE6 453 aa9.82□□□□□ -0.84
COL8A1-203ENST00000452013 TWF2Q6IBS0 349 aaKnown RBP9.82□□□□□ -0.84
COL8A1-203ENST00000452013 SV2BQ7L1I2 683 aa9.82□□□□□ -0.84
COL8A1-203ENST00000452013 KCNK18Q7Z418 384 aa9.82□□□□□ -0.84
COL8A1-203ENST00000452013 TMCO2Q7Z6W1 182 aaPredicted RBP9.82□□□□□ -0.84
COL8A1-203ENST00000452013 FIBCD1Q8N539 461 aa9.82□□□□□ -0.84
COL8A1-203ENST00000452013 CNNM3Q8NE01 707 aa9.82□□□□□ -0.84
COL8A1-203ENST00000452013 RAD54LQ92698 747 aa9.82□□□□□ -0.84
COL8A1-203ENST00000452013 TRAIPQ9BWF2 469 aa9.82□□□□□ -0.84
COL8A1-203ENST00000452013 PANK2Q9BZ23 570 aa9.82□□□□□ -0.84
COL8A1-203ENST00000452013 LRRC27Q9C0I9 530 aa9.82□□□□□ -0.84
COL8A1-203ENST00000452013 SCAND2PQ9GZW5 306 aaPredicted RBP9.82□□□□□ -0.84
COL8A1-203ENST00000452013 TMEM161AQ9NX61 479 aa9.82□□□□□ -0.84
COL8A1-203ENST00000452013 FAM13BQ9NYF5 915 aa9.82□□□□□ -0.84
COL8A1-203ENST00000452013 STK17AQ9UEE5 414 aa9.82□□□□□ -0.84
COL8A1-203ENST00000452013 PIN4Q9Y237 131 aaKnown RBP9.82□□□□□ -0.84
COL8A1-203ENST00000452013 YBX2Q9Y2T7 364 aaKnown RBP9.82□□□□□ -0.84
COL8A1-203ENST00000452013 PHLPP2Q6ZVD8 1323 aa9.82□□□□□ -0.84
COL8A1-203ENST00000452013 CCDC169A6NNP5 214 aa9.81□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms