RNA–Protein interactions for RNA: ENST00000449744.1

CHD3-205, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2

Gene CHD3, Length 880 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-205ENST00000449744 EIF2AK1Q9BQI3 630 aaKnown RBP17.07■□□□□ 0.32
CHD3-205ENST00000449744 DHX33Q9H6R0 707 aaKnown RBP17.07■□□□□ 0.32
CHD3-205ENST00000449744 BMP2KQ9NSY1 1161 aaPredicted RBP17.07■□□□□ 0.32
CHD3-205ENST00000449744 TYW1Q9NV66 732 aaKnown RBP17.07■□□□□ 0.32
CHD3-205ENST00000449744 COL4A3BPQ9Y5P4 624 aa17.07■□□□□ 0.32
CHD3-205ENST00000449744 SPTBN5Q9NRC6 3674 aaKnown RBP17.07■□□□□ 0.32
CHD3-205ENST00000449744 KIAA1671Q9BY89 1806 aa17.07■□□□□ 0.32
CHD3-205ENST00000449744 FNDC1Q4ZHG4 1894 aaPredicted RBP17.06■□□□□ 0.32
CHD3-205ENST00000449744 A0A0U1RQF3 1178 aa17.06■□□□□ 0.32
CHD3-205ENST00000449744 H3BQ06 376 aaPredicted RBP17.06■□□□□ 0.32
CHD3-205ENST00000449744 GAS2O43903 313 aaKnown RBP17.06■□□□□ 0.32
CHD3-205ENST00000449744 SLITRK3O94933 977 aa17.06■□□□□ 0.32
CHD3-205ENST00000449744 EOMESO95936 686 aa17.06■□□□□ 0.32
CHD3-205ENST00000449744 LAG3P18627 525 aa17.06■□□□□ 0.32
CHD3-205ENST00000449744 MCM7P33993 719 aa17.06■□□□□ 0.32
CHD3-205ENST00000449744 PUS10Q3MIT2 529 aaKnown RBP17.06■□□□□ 0.32
CHD3-205ENST00000449744 TWF2Q6IBS0 349 aaKnown RBP17.06■□□□□ 0.32
CHD3-205ENST00000449744 CATSPER4Q7RTX7 472 aa17.06■□□□□ 0.32
CHD3-205ENST00000449744 THNSL1Q8IYQ7 743 aa17.06■□□□□ 0.32
CHD3-205ENST00000449744 GADD45GIP1Q8TAE8 222 aaPredicted RBP17.06■□□□□ 0.32
CHD3-205ENST00000449744 MICAL1Q8TDZ2 1067 aa17.06■□□□□ 0.32
CHD3-205ENST00000449744 TMEM143Q96AN5 459 aa17.06■□□□□ 0.32
CHD3-205ENST00000449744 CCDC43Q96MW1 224 aaKnown RBP17.06■□□□□ 0.32
CHD3-205ENST00000449744 KIF2CQ99661 725 aa17.06■□□□□ 0.32
CHD3-205ENST00000449744 IGFLR1Q9H665 355 aa17.06■□□□□ 0.32
CHD3-205ENST00000449744 PIN4Q9Y237 131 aaKnown RBP17.06■□□□□ 0.32
CHD3-205ENST00000449744 WNT7AO00755 349 aa17.05■□□□□ 0.32
CHD3-205ENST00000449744 SRGAP2CP0DJJ0 459 aa17.05■□□□□ 0.32
CHD3-205ENST00000449744 SKIP12755 728 aa17.05■□□□□ 0.32
CHD3-205ENST00000449744 RBM25P49756 843 aaKnown RBP17.05■□□□□ 0.32
CHD3-205ENST00000449744 UBE3AQ05086 875 aa17.05■□□□□ 0.32
CHD3-205ENST00000449744 HYAL1Q12794 435 aa17.05■□□□□ 0.32
CHD3-205ENST00000449744 CAMK1Q14012 370 aa17.05■□□□□ 0.32
CHD3-205ENST00000449744 EMC2Q15006 297 aa17.05■□□□□ 0.32
CHD3-205ENST00000449744 PTCRAQ6ISU1 281 aaPredicted RBP17.05■□□□□ 0.32
CHD3-205ENST00000449744 LRRC43Q8N309 656 aa17.05■□□□□ 0.32
CHD3-205ENST00000449744 COLGALT1Q8NBJ5 622 aa17.05■□□□□ 0.32
CHD3-205ENST00000449744 PRPF31Q8WWY3 499 aaKnown RBP17.05■□□□□ 0.32
CHD3-205ENST00000449744 CASD1Q96PB1 797 aa17.05■□□□□ 0.32
CHD3-205ENST00000449744 MTMR9Q96QG7 549 aa17.05■□□□□ 0.32
CHD3-205ENST00000449744 MTRQ99707 1265 aa17.05■□□□□ 0.32
CHD3-205ENST00000449744 FOXP1Q9H334 677 aaPredicted RBP17.05■□□□□ 0.32
CHD3-205ENST00000449744 UPF2Q9HAU5 1272 aaKnown RBP17.05■□□□□ 0.32
CHD3-205ENST00000449744 HCSTQ9UBK5 93 aa17.05■□□□□ 0.32
CHD3-205ENST00000449744 FAM50BQ9Y247 325 aa17.05■□□□□ 0.32
CHD3-205ENST00000449744 ZBTB39O15060 712 aa17.04■□□□□ 0.32
CHD3-205ENST00000449744 ASAP2O43150 1006 aa17.04■□□□□ 0.32
CHD3-205ENST00000449744 ST18O60284 1047 aa17.04■□□□□ 0.32
CHD3-205ENST00000449744 FGF18O76093 207 aa17.04■□□□□ 0.32
CHD3-205ENST00000449744 DNAJB1P25685 340 aa17.04■□□□□ 0.32
CHD3-205ENST00000449744 RABEP1Q15276 862 aa17.04■□□□□ 0.32
CHD3-205ENST00000449744 SRGAP1Q7Z6B7 1085 aa17.04■□□□□ 0.32
CHD3-205ENST00000449744 FBXO18Q8NFZ0 1043 aa17.04■□□□□ 0.32
CHD3-205ENST00000449744 HSD17B14Q9BPX1 270 aa17.04■□□□□ 0.32
CHD3-205ENST00000449744 CWH43Q9H720 699 aa17.04■□□□□ 0.32
CHD3-205ENST00000449744 ANKEF1Q9NU02 776 aa17.04■□□□□ 0.32
CHD3-205ENST00000449744 LYPLA2O95372 231 aa17.03■□□□□ 0.32
CHD3-205ENST00000449744 IL9P15248 144 aa17.03■□□□□ 0.32
CHD3-205ENST00000449744 IRS1P35568 1242 aa17.03■□□□□ 0.32
CHD3-205ENST00000449744 PHKA2P46019 1235 aa17.03■□□□□ 0.32
CHD3-205ENST00000449744 LAMTOR4Q0VGL1 99 aa17.03■□□□□ 0.32
CHD3-205ENST00000449744 COL19A1Q14993 1142 aa17.03■□□□□ 0.32
CHD3-205ENST00000449744 ZNF598Q86UK7 904 aaKnown RBP17.03■□□□□ 0.32
CHD3-205ENST00000449744 FERMT3Q86UX7 667 aa17.03■□□□□ 0.32
CHD3-205ENST00000449744 HELQQ8TDG4 1101 aa17.03■□□□□ 0.32
CHD3-205ENST00000449744 ZNF558Q96NG5 402 aa17.03■□□□□ 0.32
CHD3-205ENST00000449744 MRPL9Q9BYD2 267 aaKnown RBP17.03■□□□□ 0.32
CHD3-205ENST00000449744 TMEM60Q9H2L4 133 aa17.03■□□□□ 0.32
CHD3-205ENST00000449744 IFT122Q9HBG6 1241 aa17.03■□□□□ 0.32
CHD3-205ENST00000449744 TLR9Q9NR96 1032 aa17.03■□□□□ 0.32
CHD3-205ENST00000449744 RNF19AQ9NV58 838 aa17.03■□□□□ 0.32
CHD3-205ENST00000449744 PUF60Q9UHX1 559 aaKnown RBP17.03■□□□□ 0.32
CHD3-205ENST00000449744 NOL7Q9UMY1 257 aaKnown RBP17.03■□□□□ 0.32
CHD3-205ENST00000449744 BRWD1Q9NSI6 2320 aa17.03■□□□□ 0.32
CHD3-205ENST00000449744 MYO7AQ13402 2215 aa17.02■□□□□ 0.32
CHD3-205ENST00000449744 GRXCR2A6NFK2 248 aa17.02■□□□□ 0.32
CHD3-205ENST00000449744 POTEMA6NI47 508 aa17.02■□□□□ 0.32
CHD3-205ENST00000449744 DGAT1O75907 488 aa17.02■□□□□ 0.32
CHD3-205ENST00000449744 GTF2F1P35269 517 aaKnown RBP eCLIP17.02■□□□□ 0.32
CHD3-205ENST00000449744 PPM1AP35813 382 aa17.02■□□□□ 0.32
CHD3-205ENST00000449744 RAB27AP51159 221 aa17.02■□□□□ 0.32
CHD3-205ENST00000449744 ORC2Q13416 577 aaPredicted RBP17.02■□□□□ 0.32
CHD3-205ENST00000449744 ZNF174Q15697 407 aa17.02■□□□□ 0.32
CHD3-205ENST00000449744 CTC1Q2NKJ3 1217 aa17.02■□□□□ 0.32
CHD3-205ENST00000449744 CLLU1OSQ5K130 101 aa17.02■□□□□ 0.32
CHD3-205ENST00000449744 KCNT2Q6UVM3 1135 aa17.02■□□□□ 0.32
CHD3-205ENST00000449744 LRRC55Q6ZSA7 311 aa17.02■□□□□ 0.32
CHD3-205ENST00000449744 RNF149Q8NC42 400 aa17.02■□□□□ 0.32
CHD3-205ENST00000449744 RSPH1Q8WYR4 309 aa17.02■□□□□ 0.32
CHD3-205ENST00000449744 TRAIPQ9BWF2 469 aa17.02■□□□□ 0.32
CHD3-205ENST00000449744 FAM105AQ9NUU6 356 aa17.02■□□□□ 0.32
CHD3-205ENST00000449744 RAPGEFL1Q9UHV5 662 aa17.02■□□□□ 0.32
CHD3-205ENST00000449744 ATG2AQ2TAZ0 1938 aa17.02■□□□□ 0.31
CHD3-205ENST00000449744 OR52Z1P0C646 297 aa17.01■□□□□ 0.31
CHD3-205ENST00000449744 ATF7P17544 494 aaPredicted RBP17.01■□□□□ 0.31
CHD3-205ENST00000449744 TECP42680 631 aa17.01■□□□□ 0.31
CHD3-205ENST00000449744 NRIP1P48552 1158 aa17.01■□□□□ 0.31
CHD3-205ENST00000449744 NDUFV1P49821 464 aa17.01■□□□□ 0.31
CHD3-205ENST00000449744 KRT17Q04695 432 aa17.01■□□□□ 0.31
CHD3-205ENST00000449744 TFDP1Q14186 410 aa17.01■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms