RNA–Protein interactions for RNA: ENST00000449489.5

RBM39-218, Transcript of RNA binding motif protein 39, humanhuman

TSL 5

Gene RBM39, Length 432 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-218ENST00000449489 C2orf71A6NGG8 1288 aa8.43□□□□□ -1.06
RBM39-218ENST00000449489 TBKBP1A7MCY6 615 aa8.43□□□□□ -1.06
RBM39-218ENST00000449489 C9IYK1 514 aa8.43□□□□□ -1.06
RBM39-218ENST00000449489 GCOM1H8Y6P7 765 aaPredicted RBP8.43□□□□□ -1.06
RBM39-218ENST00000449489 CLASP2O75122 1294 aaKnown RBP8.43□□□□□ -1.06
RBM39-218ENST00000449489 POLR2MP0CAP2 368 aa8.43□□□□□ -1.06
RBM39-218ENST00000449489 SP9P0CG40 484 aa8.43□□□□□ -1.06
RBM39-218ENST00000449489 GATMP50440 423 aa8.43□□□□□ -1.06
RBM39-218ENST00000449489 LMNB2Q03252 620 aa8.43□□□□□ -1.06
RBM39-218ENST00000449489 SMC1AQ14683 1233 aaKnown RBP8.43□□□□□ -1.06
RBM39-218ENST00000449489 BMS1Q14692 1282 aaKnown RBP8.43□□□□□ -1.06
RBM39-218ENST00000449489 RRP12Q5JTH9 1297 aaKnown RBP8.43□□□□□ -1.06
RBM39-218ENST00000449489 UTP14CQ5TAP6 766 aaKnown RBP8.43□□□□□ -1.06
RBM39-218ENST00000449489 VPS53Q5VIR6 699 aa8.43□□□□□ -1.06
RBM39-218ENST00000449489 KCNT2Q6UVM3 1135 aa8.43□□□□□ -1.06
RBM39-218ENST00000449489 MFSD6Q6ZSS7 791 aa8.43□□□□□ -1.06
RBM39-218ENST00000449489 C1orf210Q8IVY1 113 aa8.43□□□□□ -1.06
RBM39-218ENST00000449489 SIX5Q8N196 739 aa8.43□□□□□ -1.06
RBM39-218ENST00000449489 DCLK2Q8N568 766 aa8.43□□□□□ -1.06
RBM39-218ENST00000449489 SEPT1Q8WYJ6 367 aa8.43□□□□□ -1.06
RBM39-218ENST00000449489 ESR2Q92731 530 aa8.43□□□□□ -1.06
RBM39-218ENST00000449489 NXPE3Q969Y0 559 aa8.43□□□□□ -1.06
RBM39-218ENST00000449489 CELF4Q9BZC1 486 aaKnown RBP8.43□□□□□ -1.06
RBM39-218ENST00000449489 SMARCAD1Q9H4L7 1026 aa8.43□□□□□ -1.06
RBM39-218ENST00000449489 RNF41Q9H4P4 317 aaPredicted RBP8.43□□□□□ -1.06
RBM39-218ENST00000449489 KCNK12Q9HB15 430 aa8.43□□□□□ -1.06
RBM39-218ENST00000449489 PRDM9Q9NQV7 894 aa8.43□□□□□ -1.06
RBM39-218ENST00000449489 HELLSQ9NRZ9 838 aa8.43□□□□□ -1.06
RBM39-218ENST00000449489 TMEM161AQ9NX61 479 aa8.43□□□□□ -1.06
RBM39-218ENST00000449489 DLGAP2Q9P1A6 1054 aa8.43□□□□□ -1.06
RBM39-218ENST00000449489 CDH22Q9UJ99 828 aa8.43□□□□□ -1.06
RBM39-218ENST00000449489 FBXL21Q9UKT6 434 aa8.43□□□□□ -1.06
RBM39-218ENST00000449489 LAMA1P25391 3075 aa8.43□□□□□ -1.06
RBM39-218ENST00000449489 F5P12259 2224 aa8.42□□□□□ -1.06
RBM39-218ENST00000449489 ZBTB5O15062 677 aa8.42□□□□□ -1.06
RBM39-218ENST00000449489 KINO60870 393 aaKnown RBP8.42□□□□□ -1.06
RBM39-218ENST00000449489 PARP1P09874 1014 aaKnown RBP8.42□□□□□ -1.06
RBM39-218ENST00000449489 ARP10275 920 aa8.42□□□□□ -1.06
RBM39-218ENST00000449489 HOXA13P31271 388 aaPredicted RBP8.42□□□□□ -1.06
RBM39-218ENST00000449489 TCF7P36402 384 aaPredicted RBP8.42□□□□□ -1.06
RBM39-218ENST00000449489 APOBRQ0VD83 1088 aa8.42□□□□□ -1.06
RBM39-218ENST00000449489 GIT2Q14161 759 aa8.42□□□□□ -1.06
RBM39-218ENST00000449489 NONOQ15233 471 aaKnown RBP eCLIP8.42□□□□□ -1.06
RBM39-218ENST00000449489 FAM102BQ5T8I3 360 aa8.42□□□□□ -1.06
RBM39-218ENST00000449489 IQCA1Q86XH1 822 aa8.42□□□□□ -1.06
RBM39-218ENST00000449489 PI4K2BQ8TCG2 481 aa8.42□□□□□ -1.06
RBM39-218ENST00000449489 ZNF516Q92618 1163 aa8.42□□□□□ -1.06
RBM39-218ENST00000449489 CDHR1Q96JP9 859 aa8.42□□□□□ -1.06
RBM39-218ENST00000449489 RHOBTB2Q9BYZ6 727 aa8.42□□□□□ -1.06
RBM39-218ENST00000449489 TMEM117Q9H0C3 514 aa8.42□□□□□ -1.06
RBM39-218ENST00000449489 DCTPP1Q9H773 170 aa8.42□□□□□ -1.06
RBM39-218ENST00000449489 KAT14Q9H8E8 782 aa8.42□□□□□ -1.06
RBM39-218ENST00000449489 ATP6V0A4Q9HBG4 840 aa8.42□□□□□ -1.06
RBM39-218ENST00000449489 SPG21Q9NZD8 308 aa8.42□□□□□ -1.06
RBM39-218ENST00000449489 ITPR1Q14643 2758 aa8.42□□□□□ -1.06
RBM39-218ENST00000449489 SMIM35A0A1B0GVV1 85 aa8.41□□□□□ -1.06
RBM39-218ENST00000449489 GSTTP1A0A1W2PQM5 241 aa8.41□□□□□ -1.06
RBM39-218ENST00000449489 KRBA1A5PL33 1030 aa8.41□□□□□ -1.06
RBM39-218ENST00000449489 GPR182O15218 404 aa8.41□□□□□ -1.06
RBM39-218ENST00000449489 DHX16O60231 1041 aaKnown RBP8.41□□□□□ -1.06
RBM39-218ENST00000449489 MGEA5O60502 916 aa8.41□□□□□ -1.06
RBM39-218ENST00000449489 PPP1R11O60927 126 aaPredicted RBP8.41□□□□□ -1.06
RBM39-218ENST00000449489 FBXO45P0C2W1 286 aa8.41□□□□□ -1.06
RBM39-218ENST00000449489 KRT76Q01546 638 aa8.41□□□□□ -1.06
RBM39-218ENST00000449489 RARS2Q5T160 578 aaKnown RBP8.41□□□□□ -1.06
RBM39-218ENST00000449489 TSHZ3Q63HK5 1081 aa8.41□□□□□ -1.06
RBM39-218ENST00000449489 PCNX4Q63HM2 1172 aa8.41□□□□□ -1.06
RBM39-218ENST00000449489 CYP26C1Q6V0L0 522 aa8.41□□□□□ -1.06
RBM39-218ENST00000449489 C15orf39Q6ZRI6 1047 aa8.41□□□□□ -1.06
RBM39-218ENST00000449489 CCDC149Q6ZUS6 474 aa8.41□□□□□ -1.06
RBM39-218ENST00000449489 GPR149Q86SP6 731 aa8.41□□□□□ -1.06
RBM39-218ENST00000449489 NLRX1Q86UT6 975 aa8.41□□□□□ -1.06
RBM39-218ENST00000449489 PPFIBP1Q86W92 1011 aa8.41□□□□□ -1.06
RBM39-218ENST00000449489 RSPH1Q8WYR4 309 aa8.41□□□□□ -1.06
RBM39-218ENST00000449489 GLG1Q92896 1179 aa8.41□□□□□ -1.06
RBM39-218ENST00000449489 ZNF558Q96NG5 402 aa8.41□□□□□ -1.06
RBM39-218ENST00000449489 ADAM2Q99965 735 aa8.41□□□□□ -1.06
RBM39-218ENST00000449489 VAT1LQ9HCJ6 419 aa8.41□□□□□ -1.06
RBM39-218ENST00000449489 FBXO4Q9UKT5 387 aa8.41□□□□□ -1.06
RBM39-218ENST00000449489 CDV3Q9UKY7 258 aaKnown RBP8.41□□□□□ -1.06
RBM39-218ENST00000449489 EVPLQ92817 2033 aa8.41□□□□□ -1.06
RBM39-218ENST00000449489 DENND3A2RUS2 1198 aa8.4□□□□□ -1.06
RBM39-218ENST00000449489 MAFGO15525 162 aa8.4□□□□□ -1.06
RBM39-218ENST00000449489 RPS6KA5O75582 802 aa8.4□□□□□ -1.06
RBM39-218ENST00000449489 SRFP11831 508 aa8.4□□□□□ -1.06
RBM39-218ENST00000449489 INSRRP14616 1297 aa8.4□□□□□ -1.06
RBM39-218ENST00000449489 POLGP54098 1239 aaPredicted RBP8.4□□□□□ -1.06
RBM39-218ENST00000449489 NFX1Q12986 1120 aaKnown RBP8.4□□□□□ -1.06
RBM39-218ENST00000449489 LRRC55Q6ZSA7 311 aa8.4□□□□□ -1.06
RBM39-218ENST00000449489 FCHSD1Q86WN1 690 aa8.4□□□□□ -1.06
RBM39-218ENST00000449489 SLC39A11Q8N1S5 342 aa8.4□□□□□ -1.06
RBM39-218ENST00000449489 LRRC43Q8N309 656 aa8.4□□□□□ -1.06
RBM39-218ENST00000449489 SLC22A17Q8WUG5 538 aa8.4□□□□□ -1.06
RBM39-218ENST00000449489 RIN2Q8WYP3 895 aaPredicted RBP8.4□□□□□ -1.06
RBM39-218ENST00000449489 SECISBP2LQ93073 1101 aaKnown RBP8.4□□□□□ -1.06
RBM39-218ENST00000449489 GPRASP2Q96D09 838 aa8.4□□□□□ -1.06
RBM39-218ENST00000449489 CASD1Q96PB1 797 aa8.4□□□□□ -1.06
RBM39-218ENST00000449489 FAM49AQ9H0Q0 323 aaPredicted RBP8.4□□□□□ -1.06
RBM39-218ENST00000449489 SIT1Q9Y3P8 196 aa8.4□□□□□ -1.06
RBM39-218ENST00000449489 TELO2Q9Y4R8 837 aa8.4□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms