RNA–Protein interactions for RNA: ENST00000449223.3

RPS28-202, Transcript of ribosomal protein S28, humanhuman

TSL 2

Gene RPS28, Length 1,523 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28-202ENST00000449223 KCTD10Q9H3F6 313 aa21.25■□□□□ 0.99
RPS28-202ENST00000449223 CTNND2Q9UQB3 1225 aa21.25■□□□□ 0.99
RPS28-202ENST00000449223 BICDL2A1A5D9 508 aa21.24■□□□□ 0.99
RPS28-202ENST00000449223 BECN2A8MW95 431 aa21.24■□□□□ 0.99
RPS28-202ENST00000449223 ASAP2O43150 1006 aa21.24■□□□□ 0.99
RPS28-202ENST00000449223 DNM2P50570 870 aa21.24■□□□□ 0.99
RPS28-202ENST00000449223 LRRC63Q05C16 580 aa21.24■□□□□ 0.99
RPS28-202ENST00000449223 POU5F1BQ06416 359 aa21.24■□□□□ 0.99
RPS28-202ENST00000449223 DRP2Q13474 957 aa21.24■□□□□ 0.99
RPS28-202ENST00000449223 KLHL10Q6JEL2 608 aa21.24■□□□□ 0.99
RPS28-202ENST00000449223 EFCAB12Q6NXP0 572 aa21.24■□□□□ 0.99
RPS28-202ENST00000449223 TTI2Q6NXR4 508 aa21.24■□□□□ 0.99
RPS28-202ENST00000449223 ARRDC4Q8NCT1 418 aa21.24■□□□□ 0.99
RPS28-202ENST00000449223 TMEM161BQ8NDZ6 487 aa21.24■□□□□ 0.99
RPS28-202ENST00000449223 ASAP3Q8TDY4 903 aa21.24■□□□□ 0.99
RPS28-202ENST00000449223 ARMC5Q96C12 935 aa21.24■□□□□ 0.99
RPS28-202ENST00000449223 SEMA6BQ9H3T3 888 aa21.24■□□□□ 0.99
RPS28-202ENST00000449223 GRPEL1Q9HAV7 217 aa21.24■□□□□ 0.99
RPS28-202ENST00000449223 SETD4Q9NVD3 440 aa21.24■□□□□ 0.99
RPS28-202ENST00000449223 K7ENM7 598 aa21.24■□□□□ 0.99
RPS28-202ENST00000449223 GNAT1P11488 350 aa21.24■□□□□ 0.99
RPS28-202ENST00000449223 TMOD1P28289 359 aa21.24■□□□□ 0.99
RPS28-202ENST00000449223 HOXD13P35453 343 aa21.24■□□□□ 0.99
RPS28-202ENST00000449223 MRE11P49959 708 aa21.24■□□□□ 0.99
RPS28-202ENST00000449223 KNOP1Q1ED39 458 aaKnown RBP21.24■□□□□ 0.99
RPS28-202ENST00000449223 SPATA1Q5VX52 437 aa21.24■□□□□ 0.99
RPS28-202ENST00000449223 NFRKBQ6P4R8 1299 aa21.24■□□□□ 0.99
RPS28-202ENST00000449223 PPP4R3CPQ6ZMV5 832 aa21.24■□□□□ 0.99
RPS28-202ENST00000449223 HAUS6Q7Z4H7 955 aa21.24■□□□□ 0.99
RPS28-202ENST00000449223 LRRC71Q8N4P6 559 aa21.24■□□□□ 0.99
RPS28-202ENST00000449223 HSD3B7Q9H2F3 369 aa21.24■□□□□ 0.99
RPS28-202ENST00000449223 SUGCTQ9HAC7 445 aa21.24■□□□□ 0.99
RPS28-202ENST00000449223 KMT5AQ9NQR1 393 aa21.24■□□□□ 0.99
RPS28-202ENST00000449223 ADGRA3Q8IWK6 1321 aa21.23■□□□□ 0.99
RPS28-202ENST00000449223 CCL5P13501 91 aa21.23■□□□□ 0.99
RPS28-202ENST00000449223 ACLYP53396 1101 aa21.23■□□□□ 0.99
RPS28-202ENST00000449223 PMS1P54277 932 aaKnown RBP21.23■□□□□ 0.99
RPS28-202ENST00000449223 IGBP1P78318 339 aa21.23■□□□□ 0.99
RPS28-202ENST00000449223 CAPSQ13938 189 aa21.23■□□□□ 0.99
RPS28-202ENST00000449223 L1TD1Q5T7N2 865 aaKnown RBP21.23■□□□□ 0.99
RPS28-202ENST00000449223 CDCA2Q69YH5 1023 aaPredicted RBP21.23■□□□□ 0.99
RPS28-202ENST00000449223 TMEM174Q8WUU8 243 aa21.23■□□□□ 0.99
RPS28-202ENST00000449223 PRPF31Q8WWY3 499 aaKnown RBP21.23■□□□□ 0.99
RPS28-202ENST00000449223 ZNF333Q96JL9 665 aa21.23■□□□□ 0.99
RPS28-202ENST00000449223 NFKBIZQ9BYH8 718 aa21.23■□□□□ 0.99
RPS28-202ENST00000449223 GTF2IRD1Q9UHL9 959 aa21.23■□□□□ 0.99
RPS28-202ENST00000449223 TRAF3IP3Q9Y228 551 aa21.23■□□□□ 0.99
RPS28-202ENST00000449223 TRIP12Q14669 1992 aaPredicted RBP21.22■□□□□ 0.99
RPS28-202ENST00000449223 SMIM35A0A1B0GVV1 85 aa21.22■□□□□ 0.99
RPS28-202ENST00000449223 C17orf102A2RUQ5 167 aa21.22■□□□□ 0.99
RPS28-202ENST00000449223 PDXKO00764 312 aa21.22■□□□□ 0.99
RPS28-202ENST00000449223 CLCN3P51790 818 aa21.22■□□□□ 0.99
RPS28-202ENST00000449223 LAMTOR4Q0VGL1 99 aa21.22■□□□□ 0.99
RPS28-202ENST00000449223 HIC1Q14526 733 aa21.22■□□□□ 0.99
RPS28-202ENST00000449223 MTFR1Q15390 333 aa21.22■□□□□ 0.99
RPS28-202ENST00000449223 NBPF20Q3BBV1 942 aa21.22■□□□□ 0.99
RPS28-202ENST00000449223 ZC2HC1CQ53FD0 456 aaPredicted RBP21.22■□□□□ 0.99
RPS28-202ENST00000449223 MAP4K3Q8IVH8 894 aa21.22■□□□□ 0.99
RPS28-202ENST00000449223 C7orf31Q8N865 590 aa21.22■□□□□ 0.99
RPS28-202ENST00000449223 TMEM206Q9H813 350 aa21.22■□□□□ 0.99
RPS28-202ENST00000449223 SUCLA2Q9P2R7 463 aaPredicted RBP21.22■□□□□ 0.99
RPS28-202ENST00000449223 HDAC6Q9UBN7 1215 aa21.22■□□□□ 0.99
RPS28-202ENST00000449223 OGDHLQ9ULD0 1010 aa21.22■□□□□ 0.99
RPS28-202ENST00000449223 NFE2L3Q9Y4A8 694 aa21.22■□□□□ 0.99
RPS28-202ENST00000449223 ZMYM2Q9UBW7 1377 aa21.22■□□□□ 0.99
RPS28-202ENST00000449223 PHLPP2Q6ZVD8 1323 aa21.22■□□□□ 0.99
RPS28-202ENST00000449223 GOLGA6L19H0YKK7 550 aa21.21■□□□□ 0.99
RPS28-202ENST00000449223 SLC16A4O15374 487 aa21.21■□□□□ 0.99
RPS28-202ENST00000449223 PRPF6O94906 941 aaKnown RBP21.21■□□□□ 0.99
RPS28-202ENST00000449223 PTPN11Q06124 597 aaPredicted RBP21.21■□□□□ 0.99
RPS28-202ENST00000449223 NFIL3Q16649 462 aa21.21■□□□□ 0.99
RPS28-202ENST00000449223 EDRF1Q3B7T1 1238 aa21.21■□□□□ 0.99
RPS28-202ENST00000449223 ANKRD40Q6AI12 368 aa21.21■□□□□ 0.99
RPS28-202ENST00000449223 IFNLR1Q8IU57 520 aaPredicted RBP21.21■□□□□ 0.99
RPS28-202ENST00000449223 ZC3H3Q8IXZ2 948 aaKnown RBP21.21■□□□□ 0.99
RPS28-202ENST00000449223 KIAA0319LQ8IZA0 1049 aa21.21■□□□□ 0.99
RPS28-202ENST00000449223 METTL13Q8N6R0 699 aa21.21■□□□□ 0.99
RPS28-202ENST00000449223 PHF24Q9UPV7 400 aa21.21■□□□□ 0.99
RPS28-202ENST00000449223 TRIM49BA6NDI0 452 aa21.2■□□□□ 0.98
RPS28-202ENST00000449223 CCDC169A6NNP5 214 aa21.2■□□□□ 0.98
RPS28-202ENST00000449223 DNM1LO00429 736 aa21.2■□□□□ 0.98
RPS28-202ENST00000449223 ZNF18P17022 549 aa21.2■□□□□ 0.98
RPS28-202ENST00000449223 STX17P56962 302 aa21.2■□□□□ 0.98
RPS28-202ENST00000449223 CDC42EP1Q00587 391 aa21.2■□□□□ 0.98
RPS28-202ENST00000449223 KCNA1Q09470 495 aa21.2■□□□□ 0.98
RPS28-202ENST00000449223 ZNF710Q8N1W2 664 aa21.2■□□□□ 0.98
RPS28-202ENST00000449223 DUSP9Q99956 384 aaKnown RBP21.2■□□□□ 0.98
RPS28-202ENST00000449223 TMEM134Q9H6X4 195 aa21.2■□□□□ 0.98
RPS28-202ENST00000449223 TYW1Q9NV66 732 aaKnown RBP21.2■□□□□ 0.98
RPS28-202ENST00000449223 GRIN2DO15399 1336 aa21.2■□□□□ 0.98
RPS28-202ENST00000449223 DENND3A2RUS2 1198 aa21.19■□□□□ 0.98
RPS28-202ENST00000449223 TGFB1I1O43294 461 aa21.19■□□□□ 0.98
RPS28-202ENST00000449223 EFNA5P52803 228 aa21.19■□□□□ 0.98
RPS28-202ENST00000449223 SNRPFP62306 86 aaKnown RBP21.19■□□□□ 0.98
RPS28-202ENST00000449223 TFDP1Q14186 410 aa21.19■□□□□ 0.98
RPS28-202ENST00000449223 CDKAL1Q5VV42 579 aa21.19■□□□□ 0.98
RPS28-202ENST00000449223 TAF2Q6P1X5 1199 aa21.19■□□□□ 0.98
RPS28-202ENST00000449223 NELFCDQ8IXH7 590 aa21.19■□□□□ 0.98
RPS28-202ENST00000449223 SLC43A3Q8NBI5 491 aa21.19■□□□□ 0.98
RPS28-202ENST00000449223 ZBTB10Q96DT7 871 aa21.19■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms