RNA–Protein interactions for RNA: ENST00000449131.6

BEST1-202, Transcript of bestrophin 1, humanhuman

TSL 1 (best) BASIC

Gene BEST1, Length 4,267 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1-202ENST00000449131 RNF169Q8NCN4 708 aa7.69□□□□□ -1.18
BEST1-202ENST00000449131 GDAP1Q8TB36 358 aa7.69□□□□□ -1.18
BEST1-202ENST00000449131 HAUS1Q96CS2 278 aa7.69□□□□□ -1.18
BEST1-202ENST00000449131 GJD4Q96KN9 370 aaPredicted RBP7.69□□□□□ -1.18
BEST1-202ENST00000449131 PPP1R16BQ96T49 567 aa7.69□□□□□ -1.18
BEST1-202ENST00000449131 BUD13Q9BRD0 619 aaKnown RBP eCLIP7.69□□□□□ -1.18
BEST1-202ENST00000449131 REEP2Q9BRK0 252 aa7.69□□□□□ -1.18
BEST1-202ENST00000449131 FAM213AQ9BRX8 229 aa7.69□□□□□ -1.18
BEST1-202ENST00000449131 CNOT10Q9H9A5 744 aaKnown RBP7.69□□□□□ -1.18
BEST1-202ENST00000449131 FAM217BQ9NTX9 383 aaPredicted RBP7.69□□□□□ -1.18
BEST1-202ENST00000449131 ADAM22Q9P0K1 906 aa7.69□□□□□ -1.18
BEST1-202ENST00000449131 CHORDC1Q9UHD1 332 aaPredicted RBP7.69□□□□□ -1.18
BEST1-202ENST00000449131 AMACRQ9UHK6 382 aa7.69□□□□□ -1.18
BEST1-202ENST00000449131 DMGDHQ9UI17 866 aaKnown RBP7.69□□□□□ -1.18
BEST1-202ENST00000449131 SUGT1Q9Y2Z0 365 aa7.69□□□□□ -1.18
BEST1-202ENST00000449131 NOC2LQ9Y3T9 749 aaKnown RBP7.69□□□□□ -1.18
BEST1-202ENST00000449131 EMSYQ7Z589 1322 aa7.69□□□□□ -1.18
BEST1-202ENST00000449131 TARSL2A2RTX5 802 aaKnown RBP7.68□□□□□ -1.18
BEST1-202ENST00000449131 PODXLO00592 558 aa7.68□□□□□ -1.18
BEST1-202ENST00000449131 MARK3P27448 753 aa7.68□□□□□ -1.18
BEST1-202ENST00000449131 MAGOHP61326 146 aaKnown RBP7.68□□□□□ -1.18
BEST1-202ENST00000449131 SARNPP82979 210 aaKnown RBP7.68□□□□□ -1.18
BEST1-202ENST00000449131 SPP2Q13103 211 aa7.68□□□□□ -1.18
BEST1-202ENST00000449131 ICE2Q659A1 982 aa7.68□□□□□ -1.18
BEST1-202ENST00000449131 LDHDQ86WU2 507 aa7.68□□□□□ -1.18
BEST1-202ENST00000449131 THNSL1Q8IYQ7 743 aa7.68□□□□□ -1.18
BEST1-202ENST00000449131 FBXL16Q8N461 479 aa7.68□□□□□ -1.18
BEST1-202ENST00000449131 DCPSQ96C86 337 aaKnown RBP7.68□□□□□ -1.18
BEST1-202ENST00000449131 CRAMP1Q96RY5 1269 aa7.68□□□□□ -1.18
BEST1-202ENST00000449131 MIS12Q9H081 205 aa7.68□□□□□ -1.18
BEST1-202ENST00000449131 TAF1DQ9H5J8 278 aaPredicted RBP7.68□□□□□ -1.18
BEST1-202ENST00000449131 TBC1D22BQ9NU19 505 aa7.68□□□□□ -1.18
BEST1-202ENST00000449131 INTS13Q9NVM9 706 aa7.68□□□□□ -1.18
BEST1-202ENST00000449131 FEM1BQ9UK73 627 aa7.68□□□□□ -1.18
BEST1-202ENST00000449131 AKT3Q9Y243 479 aa7.68□□□□□ -1.18
BEST1-202ENST00000449131 VIRMAQ69YN4 1812 aaKnown RBP7.68□□□□□ -1.18
BEST1-202ENST00000449131 SYNGAP1Q96PV0 1343 aa7.68□□□□□ -1.18
BEST1-202ENST00000449131 INHBAP08476 426 aa7.68□□□□□ -1.18
BEST1-202ENST00000449131 CARSP49589 748 aaKnown RBP7.68□□□□□ -1.18
BEST1-202ENST00000449131 JAK3P52333 1124 aa7.68□□□□□ -1.18
BEST1-202ENST00000449131 PPP4CP60510 307 aa7.68□□□□□ -1.18
BEST1-202ENST00000449131 BASP1P80723 227 aaKnown RBP7.68□□□□□ -1.18
BEST1-202ENST00000449131 C6orf118Q5T5N4 469 aa7.68□□□□□ -1.18
BEST1-202ENST00000449131 CCNI2Q6ZMN8 369 aaPredicted RBP7.68□□□□□ -1.18
BEST1-202ENST00000449131 FAM149B1Q96BN6 582 aa7.68□□□□□ -1.18
BEST1-202ENST00000449131 C11orf70Q9BRQ4 267 aa7.68□□□□□ -1.18
BEST1-202ENST00000449131 SEPT10Q9P0V9 454 aa7.68□□□□□ -1.18
BEST1-202ENST00000449131 MON2Q7Z3U7 1717 aa7.68□□□□□ -1.18
BEST1-202ENST00000449131 EXOC1LA0A1B0GW35 172 aa7.68□□□□□ -1.18
BEST1-202ENST00000449131 GRID2IPA4D2P6 1211 aa7.68□□□□□ -1.18
BEST1-202ENST00000449131 PALM3A6NDB9 673 aaPredicted RBP7.68□□□□□ -1.18
BEST1-202ENST00000449131 ZRANB2O95218 330 aaKnown RBP eCLIP7.68□□□□□ -1.18
BEST1-202ENST00000449131 UCHL3P15374 230 aa7.68□□□□□ -1.18
BEST1-202ENST00000449131 SOX5P35711 763 aa7.68□□□□□ -1.18
BEST1-202ENST00000449131 PPP2R5CQ13362 524 aa7.68□□□□□ -1.18
BEST1-202ENST00000449131 EPHA7Q15375 998 aa7.68□□□□□ -1.18
BEST1-202ENST00000449131 SNCBQ16143 134 aa7.68□□□□□ -1.18
BEST1-202ENST00000449131 TAF12Q16514 161 aa7.68□□□□□ -1.18
BEST1-202ENST00000449131 BBS9Q3SYG4 887 aa7.68□□□□□ -1.18
BEST1-202ENST00000449131 ARHGEF18Q6ZSZ5 1173 aa7.68□□□□□ -1.18
BEST1-202ENST00000449131 HAUS6Q7Z4H7 955 aa7.68□□□□□ -1.18
BEST1-202ENST00000449131 TBC1D1Q86TI0 1168 aaPredicted RBP7.68□□□□□ -1.18
BEST1-202ENST00000449131 NME8Q8N427 588 aa7.68□□□□□ -1.18
BEST1-202ENST00000449131 C7orf31Q8N865 590 aa7.68□□□□□ -1.18
BEST1-202ENST00000449131 PRPF38AQ8NAV1 312 aaKnown RBP7.68□□□□□ -1.18
BEST1-202ENST00000449131 KLHL29Q96CT2 875 aa7.68□□□□□ -1.18
BEST1-202ENST00000449131 NLRP4Q96MN2 994 aa7.68□□□□□ -1.18
BEST1-202ENST00000449131 MED10Q9BTT4 135 aa7.68□□□□□ -1.18
BEST1-202ENST00000449131 ZNF277Q9NRM2 450 aaPredicted RBP7.68□□□□□ -1.18
BEST1-202ENST00000449131 RNF146Q9NTX7 359 aa7.68□□□□□ -1.18
BEST1-202ENST00000449131 FAM205AQ6ZU69 1335 aa7.67□□□□□ -1.18
BEST1-202ENST00000449131 SALL1Q9NSC2 1324 aa7.67□□□□□ -1.18
BEST1-202ENST00000449131 SLC37A4O43826 429 aa7.67□□□□□ -1.18
BEST1-202ENST00000449131 CHRNA5P30532 468 aa7.67□□□□□ -1.18
BEST1-202ENST00000449131 ERFP50548 548 aa7.67□□□□□ -1.18
BEST1-202ENST00000449131 ADCY2Q08462 1091 aa7.67□□□□□ -1.18
BEST1-202ENST00000449131 SUPT20HL1Q3ZLR7 823 aa7.67□□□□□ -1.18
BEST1-202ENST00000449131 CCDC38Q502W7 563 aa7.67□□□□□ -1.18
BEST1-202ENST00000449131 CCDC125Q86Z20 511 aa7.67□□□□□ -1.18
BEST1-202ENST00000449131 MCPH1Q8NEM0 835 aa7.67□□□□□ -1.18
BEST1-202ENST00000449131 HDAC7Q8WUI4 952 aa7.67□□□□□ -1.18
BEST1-202ENST00000449131 RFFLQ8WZ73 363 aa7.67□□□□□ -1.18
BEST1-202ENST00000449131 ELAC2Q9BQ52 826 aaKnown RBP7.67□□□□□ -1.18
BEST1-202ENST00000449131 RBM12Q9NTZ6 932 aaKnown RBP7.67□□□□□ -1.18
BEST1-202ENST00000449131 GABBR1Q9UBS5 961 aa7.67□□□□□ -1.18
BEST1-202ENST00000449131 DIS3Q9Y2L1 958 aaKnown RBP7.67□□□□□ -1.18
BEST1-202ENST00000449131 ZSCAN5CA6NGD5 496 aaPredicted RBP7.67□□□□□ -1.18
BEST1-202ENST00000449131 PSMD14O00487 310 aa7.67□□□□□ -1.18
BEST1-202ENST00000449131 MYBP10242 640 aa7.67□□□□□ -1.18
BEST1-202ENST00000449131 RXRBP28702 533 aa7.67□□□□□ -1.18
BEST1-202ENST00000449131 COPB2P35606 906 aa7.67□□□□□ -1.18
BEST1-202ENST00000449131 PMS1P54277 932 aaKnown RBP7.67□□□□□ -1.18
BEST1-202ENST00000449131 GALCP54803 685 aa7.67□□□□□ -1.18
BEST1-202ENST00000449131 HDLBPQ00341 1268 aaKnown RBP7.67□□□□□ -1.18
BEST1-202ENST00000449131 NUGGCQ68CJ6 796 aa7.67□□□□□ -1.18
BEST1-202ENST00000449131 SNRNP48Q6IEG0 339 aaKnown RBP7.67□□□□□ -1.18
BEST1-202ENST00000449131 SWSAP1Q6NVH7 229 aa7.67□□□□□ -1.18
BEST1-202ENST00000449131 TMEM270Q6UE05 265 aa7.67□□□□□ -1.18
BEST1-202ENST00000449131 ZNF564Q8TBZ8 553 aaPredicted RBP7.67□□□□□ -1.18
BEST1-202ENST00000449131 CFAP57Q96MR6 1250 aa7.67□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms