RNA–Protein interactions for RNA: ENST00000448971.5

USP39-206, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 610 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-206ENST00000448971 BMPR1AP36894 532 aa16.26■□□□□ 0.19
USP39-206ENST00000448971 NPEPPSP55786 919 aa16.26■□□□□ 0.19
USP39-206ENST00000448971 PTGDRQ13258 359 aa16.26■□□□□ 0.19
USP39-206ENST00000448971 XKR9Q5GH70 373 aa16.26■□□□□ 0.19
USP39-206ENST00000448971 OTUD6AQ7L8S5 288 aa16.26■□□□□ 0.19
USP39-206ENST00000448971 BRAPQ7Z569 592 aa16.26■□□□□ 0.19
USP39-206ENST00000448971 RAB34Q9BZG1 259 aa16.26■□□□□ 0.19
USP39-206ENST00000448971 RC3H2Q9HBD1 1191 aaKnown RBP16.26■□□□□ 0.19
USP39-206ENST00000448971 EIF4ENIF1Q9NRA8 985 aaKnown RBP16.26■□□□□ 0.19
USP39-206ENST00000448971 ENPP3O14638 875 aa16.25■□□□□ 0.19
USP39-206ENST00000448971 GRM6O15303 877 aa16.25■□□□□ 0.19
USP39-206ENST00000448971 NCK2O43639 380 aa16.25■□□□□ 0.19
USP39-206ENST00000448971 RPS6KA5O75582 802 aa16.25■□□□□ 0.19
USP39-206ENST00000448971 SLITRK3O94933 977 aa16.25■□□□□ 0.19
USP39-206ENST00000448971 DNM2P50570 870 aa16.25■□□□□ 0.19
USP39-206ENST00000448971 DLX2Q07687 328 aaPredicted RBP16.25■□□□□ 0.19
USP39-206ENST00000448971 NFX1Q12986 1120 aaKnown RBP16.25■□□□□ 0.19
USP39-206ENST00000448971 ADHFE1Q8IWW8 467 aa16.25■□□□□ 0.19
USP39-206ENST00000448971 FIBCD1Q8N539 461 aa16.25■□□□□ 0.19
USP39-206ENST00000448971 LINC01465Q8N7H1 131 aa16.25■□□□□ 0.19
USP39-206ENST00000448971 NLRP7Q8WX94 980 aa16.25■□□□□ 0.19
USP39-206ENST00000448971 CLP1Q92989 425 aaKnown RBP16.25■□□□□ 0.19
USP39-206ENST00000448971 ZNF668Q96K58 619 aaPredicted RBP16.25■□□□□ 0.19
USP39-206ENST00000448971 AGO3Q9H9G7 860 aaKnown RBP16.25■□□□□ 0.19
USP39-206ENST00000448971 CLDND1Q9NY35 253 aa16.25■□□□□ 0.19
USP39-206ENST00000448971 PPME1Q9Y570 386 aa16.25■□□□□ 0.19
USP39-206ENST00000448971 SQORQ9Y6N5 450 aa16.25■□□□□ 0.19
USP39-206ENST00000448971 TECTAO75443 2155 aa16.25■□□□□ 0.19
USP39-206ENST00000448971 ARID2Q68CP9 1835 aa16.24■□□□□ 0.19
USP39-206ENST00000448971 MAFO75444 373 aaPredicted RBP16.24■□□□□ 0.19
USP39-206ENST00000448971 SYT1P21579 422 aa16.24■□□□□ 0.19
USP39-206ENST00000448971 RFC5P40937 340 aa16.24■□□□□ 0.19
USP39-206ENST00000448971 FXR2P51116 673 aaKnown RBP eCLIP16.24■□□□□ 0.19
USP39-206ENST00000448971 CRYBB1P53674 252 aaPredicted RBP16.24■□□□□ 0.19
USP39-206ENST00000448971 NLRP11P59045 1033 aaKnown RBP16.24■□□□□ 0.19
USP39-206ENST00000448971 HYAL1Q12794 435 aa16.24■□□□□ 0.19
USP39-206ENST00000448971 DRP2Q13474 957 aa16.24■□□□□ 0.19
USP39-206ENST00000448971 EMC2Q15006 297 aa16.24■□□□□ 0.19
USP39-206ENST00000448971 ODR4Q5SWX8 454 aa16.24■□□□□ 0.19
USP39-206ENST00000448971 EP400NLQ6ZTU2 488 aa16.24■□□□□ 0.19
USP39-206ENST00000448971 TMEM40Q8WWA1 233 aa16.24■□□□□ 0.19
USP39-206ENST00000448971 ZNF689Q96CS4 500 aaPredicted RBP16.24■□□□□ 0.19
USP39-206ENST00000448971 CEP89Q96ST8 783 aa16.24■□□□□ 0.19
USP39-206ENST00000448971 HSD17B14Q9BPX1 270 aa16.24■□□□□ 0.19
USP39-206ENST00000448971 TUFT1Q9NNX1 390 aa16.24■□□□□ 0.19
USP39-206ENST00000448971 LRWD1Q9UFC0 647 aa16.24■□□□□ 0.19
USP39-206ENST00000448971 PADI3Q9ULW8 664 aa16.24■□□□□ 0.19
USP39-206ENST00000448971 FAM50BQ9Y247 325 aa16.24■□□□□ 0.19
USP39-206ENST00000448971 MED24O75448 989 aa16.23■□□□□ 0.19
USP39-206ENST00000448971 LYPLA2O95372 231 aa16.23■□□□□ 0.19
USP39-206ENST00000448971 IBSPP21815 317 aaPredicted RBP16.23■□□□□ 0.19
USP39-206ENST00000448971 CTNNB1P35222 781 aa16.23■□□□□ 0.19
USP39-206ENST00000448971 IRS1P35568 1242 aa16.23■□□□□ 0.19
USP39-206ENST00000448971 PRPHP41219 470 aa16.23■□□□□ 0.19
USP39-206ENST00000448971 GPC3P51654 580 aa16.23■□□□□ 0.19
USP39-206ENST00000448971 CAMK1Q14012 370 aa16.23■□□□□ 0.19
USP39-206ENST00000448971 SMAD2Q15796 467 aaKnown RBP16.23■□□□□ 0.19
USP39-206ENST00000448971 CSPP1Q1MSJ5 1256 aa16.23■□□□□ 0.19
USP39-206ENST00000448971 POTEGQ6S5H5 508 aa16.23■□□□□ 0.19
USP39-206ENST00000448971 RHPN2Q8IUC4 686 aa16.23■□□□□ 0.19
USP39-206ENST00000448971 EXOC8Q8IYI6 725 aa16.23■□□□□ 0.19
USP39-206ENST00000448971 CRIPAKQ8N1N5 446 aa16.23■□□□□ 0.19
USP39-206ENST00000448971 C4orf32Q8N8J7 132 aa16.23■□□□□ 0.19
USP39-206ENST00000448971 ZNF579Q8NAF0 562 aaKnown RBP16.23■□□□□ 0.19
USP39-206ENST00000448971 SNX29Q8TEQ0 813 aa16.23■□□□□ 0.19
USP39-206ENST00000448971 NLRP4Q96MN2 994 aa16.23■□□□□ 0.19
USP39-206ENST00000448971 MTRQ99707 1265 aa16.23■□□□□ 0.19
USP39-206ENST00000448971 C11orf84Q9BUA3 381 aaPredicted RBP16.23■□□□□ 0.19
USP39-206ENST00000448971 FTHL17Q9BXU8 183 aa16.23■□□□□ 0.19
USP39-206ENST00000448971 LMAN2LQ9H0V9 348 aa16.23■□□□□ 0.19
USP39-206ENST00000448971 CDHR5Q9HBB8 845 aa16.23■□□□□ 0.19
USP39-206ENST00000448971 NOC2LQ9Y3T9 749 aaKnown RBP16.23■□□□□ 0.19
USP39-206ENST00000448971 IGKV6-21A0A0C4DH24 114 aa16.22■□□□□ 0.19
USP39-206ENST00000448971 ZBTB39O15060 712 aa16.22■□□□□ 0.19
USP39-206ENST00000448971 GPR182O15218 404 aa16.22■□□□□ 0.19
USP39-206ENST00000448971 GPR32O75388 356 aa16.22■□□□□ 0.19
USP39-206ENST00000448971 CCT6AP40227 531 aaKnown RBP16.22■□□□□ 0.19
USP39-206ENST00000448971 ATP2C1P98194 919 aaPredicted RBP16.22■□□□□ 0.19
USP39-206ENST00000448971 DTHD1Q6ZMT9 781 aa16.22■□□□□ 0.19
USP39-206ENST00000448971 CATSPER3Q86XQ3 398 aa16.22■□□□□ 0.19
USP39-206ENST00000448971 ZNF710Q8N1W2 664 aa16.22■□□□□ 0.19
USP39-206ENST00000448971 PIGOQ8TEQ8 1089 aa16.22■□□□□ 0.19
USP39-206ENST00000448971 FBXL18Q96ME1 805 aa16.22■□□□□ 0.19
USP39-206ENST00000448971 POLR3CQ9BUI4 534 aaPredicted RBP16.22■□□□□ 0.19
USP39-206ENST00000448971 KCNH6Q9H252 994 aa16.22■□□□□ 0.19
USP39-206ENST00000448971 DHX33Q9H6R0 707 aaKnown RBP16.22■□□□□ 0.19
USP39-206ENST00000448971 ATP6V0A4Q9HBG4 840 aa16.22■□□□□ 0.19
USP39-206ENST00000448971 ANKEF1Q9NU02 776 aa16.22■□□□□ 0.19
USP39-206ENST00000448971 SUCLA2Q9P2R7 463 aaPredicted RBP16.22■□□□□ 0.19
USP39-206ENST00000448971 RWDD3Q9Y3V2 267 aa16.22■□□□□ 0.19
USP39-206ENST00000448971 ADGRA3Q8IWK6 1321 aa16.21■□□□□ 0.19
USP39-206ENST00000448971 DENND3A2RUS2 1198 aa16.21■□□□□ 0.19
USP39-206ENST00000448971 MBTPS2O43462 519 aa16.21■□□□□ 0.19
USP39-206ENST00000448971 STX6O43752 255 aa16.21■□□□□ 0.19
USP39-206ENST00000448971 GAS2O43903 313 aaKnown RBP16.21■□□□□ 0.19
USP39-206ENST00000448971 USO1O60763 962 aaKnown RBP16.21■□□□□ 0.19
USP39-206ENST00000448971 DGAT1O75907 488 aa16.21■□□□□ 0.19
USP39-206ENST00000448971 DGKIO75912 1065 aa16.21■□□□□ 0.19
USP39-206ENST00000448971 BMP15O95972 392 aa16.21■□□□□ 0.19
USP39-206ENST00000448971 SPATA31C1P0DKV0 1188 aa16.21■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms