RNA–Protein interactions for RNA: ENST00000448530.5

VCP-203, Transcript of valosin containing protein, humanhuman

TSL 5

Gene VCP, Length 950 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-203ENST00000448530 NEK9Q8TD19 979 aa22.02■■□□□ 1.12
VCP-203ENST00000448530 PSPC1Q8WXF1 523 aaKnown RBP22.02■■□□□ 1.12
VCP-203ENST00000448530 C8orf76Q96K31 380 aa22.02■■□□□ 1.12
VCP-203ENST00000448530 WRAP73Q9P2S5 460 aaPredicted RBP22.02■■□□□ 1.12
VCP-203ENST00000448530 COL4A3BPQ9Y5P4 624 aa22.02■■□□□ 1.12
VCP-203ENST00000448530 PLXNA4Q9HCM2 1894 aa22.01■■□□□ 1.11
VCP-203ENST00000448530 A0A0U1RQF3 1178 aa22.01■■□□□ 1.11
VCP-203ENST00000448530 GAS2O43903 313 aaKnown RBP22.01■■□□□ 1.11
VCP-203ENST00000448530 EOMESO95936 686 aa22.01■■□□□ 1.11
VCP-203ENST00000448530 DNAJB1P25685 340 aa22.01■■□□□ 1.11
VCP-203ENST00000448530 TXKP42681 527 aa22.01■■□□□ 1.11
VCP-203ENST00000448530 GUCY1B3Q02153 619 aa22.01■■□□□ 1.11
VCP-203ENST00000448530 UBE3AQ05086 875 aa22.01■■□□□ 1.11
VCP-203ENST00000448530 SPIRE1Q08AE8 756 aa22.01■■□□□ 1.11
VCP-203ENST00000448530 ST3GAL1Q11201 340 aa22.01■■□□□ 1.11
VCP-203ENST00000448530 COL19A1Q14993 1142 aa22.01■■□□□ 1.11
VCP-203ENST00000448530 CATSPER4Q7RTX7 472 aa22.01■■□□□ 1.11
VCP-203ENST00000448530 KSR1Q8IVT5 923 aa22.01■■□□□ 1.11
VCP-203ENST00000448530 LRRC43Q8N309 656 aa22.01■■□□□ 1.11
VCP-203ENST00000448530 COLGALT1Q8NBJ5 622 aa22.01■■□□□ 1.11
VCP-203ENST00000448530 MICAL1Q8TDZ2 1067 aa22.01■■□□□ 1.11
VCP-203ENST00000448530 TCP11Q8WWU5 503 aa22.01■■□□□ 1.11
VCP-203ENST00000448530 CCDC43Q96MW1 224 aaKnown RBP22.01■■□□□ 1.11
VCP-203ENST00000448530 TTC12Q9H892 705 aaPredicted RBP22.01■■□□□ 1.11
VCP-203ENST00000448530 SH2B1Q9NRF2 756 aaPredicted RBP22.01■■□□□ 1.11
VCP-203ENST00000448530 FGF18O76093 207 aa22■■□□□ 1.11
VCP-203ENST00000448530 SKIP12755 728 aa22■■□□□ 1.11
VCP-203ENST00000448530 ATP2B1P20020 1258 aa22■■□□□ 1.11
VCP-203ENST00000448530 HMGN5P82970 282 aaKnown RBP22■■□□□ 1.11
VCP-203ENST00000448530 GNL2Q13823 731 aaKnown RBP22■■□□□ 1.11
VCP-203ENST00000448530 CAMK1Q14012 370 aa22■■□□□ 1.11
VCP-203ENST00000448530 C8orf34Q49A92 452 aa22■■□□□ 1.11
VCP-203ENST00000448530 TWF2Q6IBS0 349 aaKnown RBP22■■□□□ 1.11
VCP-203ENST00000448530 ZNF579Q8NAF0 562 aaKnown RBP22■■□□□ 1.11
VCP-203ENST00000448530 FAM184AQ8NB25 1140 aa22■■□□□ 1.11
VCP-203ENST00000448530 TMEM143Q96AN5 459 aa22■■□□□ 1.11
VCP-203ENST00000448530 CASD1Q96PB1 797 aa22■■□□□ 1.11
VCP-203ENST00000448530 EIF2AK1Q9BQI3 630 aaKnown RBP22■■□□□ 1.11
VCP-203ENST00000448530 DHX33Q9H6R0 707 aaKnown RBP22■■□□□ 1.11
VCP-203ENST00000448530 BMP2KQ9NSY1 1161 aaPredicted RBP22■■□□□ 1.11
VCP-203ENST00000448530 PIN4Q9Y237 131 aaKnown RBP22■■□□□ 1.11
VCP-203ENST00000448530 ARID2Q68CP9 1835 aa21.99■■□□□ 1.11
VCP-203ENST00000448530 GRXCR2A6NFK2 248 aa21.99■■□□□ 1.11
VCP-203ENST00000448530 EMC2Q15006 297 aa21.99■■□□□ 1.11
VCP-203ENST00000448530 PRPF31Q8WWY3 499 aaKnown RBP21.99■■□□□ 1.11
VCP-203ENST00000448530 CWH43Q9H720 699 aa21.99■■□□□ 1.11
VCP-203ENST00000448530 HCSTQ9UBK5 93 aa21.99■■□□□ 1.11
VCP-203ENST00000448530 PUF60Q9UHX1 559 aaKnown RBP21.99■■□□□ 1.11
VCP-203ENST00000448530 ASAP2O43150 1006 aa21.98■■□□□ 1.11
VCP-203ENST00000448530 SLITRK3O94933 977 aa21.98■■□□□ 1.11
VCP-203ENST00000448530 SRGAP2CP0DJJ0 459 aa21.98■■□□□ 1.11
VCP-203ENST00000448530 IL9P15248 144 aa21.98■■□□□ 1.11
VCP-203ENST00000448530 MCM7P33993 719 aa21.98■■□□□ 1.11
VCP-203ENST00000448530 IRS1P35568 1242 aa21.98■■□□□ 1.11
VCP-203ENST00000448530 PPM1AP35813 382 aa21.98■■□□□ 1.11
VCP-203ENST00000448530 CTC1Q2NKJ3 1217 aa21.98■■□□□ 1.11
VCP-203ENST00000448530 HELQQ8TDG4 1101 aa21.98■■□□□ 1.11
VCP-203ENST00000448530 ZNF558Q96NG5 402 aa21.98■■□□□ 1.11
VCP-203ENST00000448530 MTRQ99707 1265 aa21.98■■□□□ 1.11
VCP-203ENST00000448530 MRPL9Q9BYD2 267 aaKnown RBP21.98■■□□□ 1.11
VCP-203ENST00000448530 TLR9Q9NR96 1032 aa21.98■■□□□ 1.11
VCP-203ENST00000448530 RNF19AQ9NV58 838 aa21.98■■□□□ 1.11
VCP-203ENST00000448530 GTF2F1P35269 517 aaKnown RBP eCLIP21.97■■□□□ 1.11
VCP-203ENST00000448530 PHKA2P46019 1235 aa21.97■■□□□ 1.11
VCP-203ENST00000448530 NDUFV1P49821 464 aa21.97■■□□□ 1.11
VCP-203ENST00000448530 LAMTOR4Q0VGL1 99 aa21.97■■□□□ 1.11
VCP-203ENST00000448530 PDE12Q6L8Q7 609 aaKnown RBP21.97■■□□□ 1.11
VCP-203ENST00000448530 KCNT2Q6UVM3 1135 aa21.97■■□□□ 1.11
VCP-203ENST00000448530 SRGAP1Q7Z6B7 1085 aa21.97■■□□□ 1.11
VCP-203ENST00000448530 ZNF598Q86UK7 904 aaKnown RBP21.97■■□□□ 1.11
VCP-203ENST00000448530 FAM178BQ8IXR5 827 aa21.97■■□□□ 1.11
VCP-203ENST00000448530 RSPH1Q8WYR4 309 aa21.97■■□□□ 1.11
VCP-203ENST00000448530 MTMR9Q96QG7 549 aa21.97■■□□□ 1.11
VCP-203ENST00000448530 TRAIPQ9BWF2 469 aa21.97■■□□□ 1.11
VCP-203ENST00000448530 ANKEF1Q9NU02 776 aa21.97■■□□□ 1.11
VCP-203ENST00000448530 MUC3AQ02505 3323 aa21.97■■□□□ 1.11
VCP-203ENST00000448530 ZBTB39O15060 712 aa21.96■■□□□ 1.11
VCP-203ENST00000448530 LYPLA2O95372 231 aa21.96■■□□□ 1.11
VCP-203ENST00000448530 SSTR3P32745 418 aaPredicted RBP21.96■■□□□ 1.11
VCP-203ENST00000448530 LTBRP36941 435 aa21.96■■□□□ 1.11
VCP-203ENST00000448530 NRIP1P48552 1158 aa21.96■■□□□ 1.11
VCP-203ENST00000448530 RBM25P49756 843 aaKnown RBP21.96■■□□□ 1.11
VCP-203ENST00000448530 RAB27AP51159 221 aa21.96■■□□□ 1.11
VCP-203ENST00000448530 KRT17Q04695 432 aa21.96■■□□□ 1.11
VCP-203ENST00000448530 CLUL1Q15846 466 aa21.96■■□□□ 1.11
VCP-203ENST00000448530 CLLU1OSQ5K130 101 aa21.96■■□□□ 1.11
VCP-203ENST00000448530 LRRC55Q6ZSA7 311 aa21.96■■□□□ 1.11
VCP-203ENST00000448530 RBM23Q86U06 439 aaKnown RBP21.96■■□□□ 1.11
VCP-203ENST00000448530 HSD17B14Q9BPX1 270 aa21.96■■□□□ 1.11
VCP-203ENST00000448530 FOXP1Q9H334 677 aaPredicted RBP21.96■■□□□ 1.11
VCP-203ENST00000448530 TLE6Q9H808 572 aa21.96■■□□□ 1.11
VCP-203ENST00000448530 IFT122Q9HBG6 1241 aa21.96■■□□□ 1.11
VCP-203ENST00000448530 WNT7AO00755 349 aa21.95■■□□□ 1.1
VCP-203ENST00000448530 ADAM15Q13444 863 aa21.95■■□□□ 1.1
VCP-203ENST00000448530 MXD4Q14582 209 aaPredicted RBP21.95■■□□□ 1.1
VCP-203ENST00000448530 GLB1LQ6UWU2 654 aa21.95■■□□□ 1.1
VCP-203ENST00000448530 ADGRD2Q7Z7M1 963 aa21.95■■□□□ 1.1
VCP-203ENST00000448530 FERMT3Q86UX7 667 aa21.95■■□□□ 1.1
VCP-203ENST00000448530 EFHBQ8N7U6 833 aa21.95■■□□□ 1.1
VCP-203ENST00000448530 RNF149Q8NC42 400 aa21.95■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms