RNA–Protein interactions for RNA: ENST00000448520.5

PDLIM2-213, Transcript of PDZ and LIM domain 2, humanhuman

TSL 3

Gene PDLIM2, Length 894 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-213ENST00000448520 TNFRSF25Q93038 417 aa15.43■□□□□ 0.06
PDLIM2-213ENST00000448520 LENG9Q96B70 501 aa15.43■□□□□ 0.06
PDLIM2-213ENST00000448520 ADAMTS10Q9H324 1103 aa15.43■□□□□ 0.06
PDLIM2-213ENST00000448520 CWH43Q9H720 699 aa15.43■□□□□ 0.06
PDLIM2-213ENST00000448520 PLXNA4Q9HCM2 1894 aa15.42■□□□□ 0.06
PDLIM2-213ENST00000448520 LOC730098B7Z3J9 87 aa15.42■□□□□ 0.06
PDLIM2-213ENST00000448520 SRGAP2BP0DMP2 458 aa15.42■□□□□ 0.06
PDLIM2-213ENST00000448520 CLCN3P51790 818 aa15.42■□□□□ 0.06
PDLIM2-213ENST00000448520 JAK3P52333 1124 aa15.42■□□□□ 0.06
PDLIM2-213ENST00000448520 ERVFC1P60507 584 aa15.42■□□□□ 0.06
PDLIM2-213ENST00000448520 KRT17Q04695 432 aa15.42■□□□□ 0.06
PDLIM2-213ENST00000448520 RESTQ13127 1097 aa15.42■□□□□ 0.06
PDLIM2-213ENST00000448520 DUSP6Q16828 381 aa15.42■□□□□ 0.06
PDLIM2-213ENST00000448520 FAM173BQ6P4H8 233 aa15.42■□□□□ 0.06
PDLIM2-213ENST00000448520 TMEM184AQ6ZMB5 413 aa15.42■□□□□ 0.06
PDLIM2-213ENST00000448520 ABI1Q8IZP0 508 aa15.42■□□□□ 0.06
PDLIM2-213ENST00000448520 LINC01465Q8N7H1 131 aa15.42■□□□□ 0.06
PDLIM2-213ENST00000448520 RDM1Q8NG50 284 aa15.42■□□□□ 0.06
PDLIM2-213ENST00000448520 MRPS27Q92552 414 aaKnown RBP15.42■□□□□ 0.06
PDLIM2-213ENST00000448520 CHAMP1Q96JM3 812 aa15.42■□□□□ 0.06
PDLIM2-213ENST00000448520 PPP1R16BQ96T49 567 aa15.42■□□□□ 0.06
PDLIM2-213ENST00000448520 PHF7Q9BWX1 381 aaPredicted RBP15.42■□□□□ 0.06
PDLIM2-213ENST00000448520 NGRNQ9NPE2 291 aaKnown RBP15.42■□□□□ 0.06
PDLIM2-213ENST00000448520 MUTYHQ9UIF7 546 aa15.42■□□□□ 0.06
PDLIM2-213ENST00000448520 TECTAO75443 2155 aa15.42■□□□□ 0.06
PDLIM2-213ENST00000448520 MYH15Q9Y2K3 1946 aa15.41■□□□□ 0.06
PDLIM2-213ENST00000448520 FSCN2O14926 492 aa15.41■□□□□ 0.06
PDLIM2-213ENST00000448520 PER2O15055 1255 aa15.41■□□□□ 0.06
PDLIM2-213ENST00000448520 MSH4O15457 936 aa15.41■□□□□ 0.06
PDLIM2-213ENST00000448520 ZNF862O60290 1169 aa15.41■□□□□ 0.06
PDLIM2-213ENST00000448520 GAS7O60861 476 aa15.41■□□□□ 0.06
PDLIM2-213ENST00000448520 GLP2RO95838 553 aa15.41■□□□□ 0.06
PDLIM2-213ENST00000448520 EOMESO95936 686 aa15.41■□□□□ 0.06
PDLIM2-213ENST00000448520 OATP04181 439 aa15.41■□□□□ 0.06
PDLIM2-213ENST00000448520 FGFR1P11362 822 aa15.41■□□□□ 0.06
PDLIM2-213ENST00000448520 ATF7P17544 494 aaPredicted RBP15.41■□□□□ 0.06
PDLIM2-213ENST00000448520 PPM1AP35813 382 aa15.41■□□□□ 0.06
PDLIM2-213ENST00000448520 CBX2Q14781 532 aaPredicted RBP15.41■□□□□ 0.06
PDLIM2-213ENST00000448520 SAFBQ15424 915 aaKnown RBP eCLIP15.41■□□□□ 0.06
PDLIM2-213ENST00000448520 BMP8AQ7Z5Y6 402 aa15.41■□□□□ 0.06
PDLIM2-213ENST00000448520 SLC5A5Q92911 643 aa15.41■□□□□ 0.06
PDLIM2-213ENST00000448520 CASD1Q96PB1 797 aa15.41■□□□□ 0.06
PDLIM2-213ENST00000448520 TEKT3Q9BXF9 490 aa15.41■□□□□ 0.06
PDLIM2-213ENST00000448520 DACT1Q9NYF0 836 aa15.41■□□□□ 0.06
PDLIM2-213ENST00000448520 BARX2Q9UMQ3 279 aaPredicted RBP15.41■□□□□ 0.06
PDLIM2-213ENST00000448520 USP15Q9Y4E8 981 aaPredicted RBP15.41■□□□□ 0.06
PDLIM2-213ENST00000448520 ZNF318Q5VUA4 2279 aa15.41■□□□□ 0.06
PDLIM2-213ENST00000448520 A0A0U1RQF3 1178 aa15.4■□□□□ 0.06
PDLIM2-213ENST00000448520 WNT7AO00755 349 aa15.4■□□□□ 0.06
PDLIM2-213ENST00000448520 EDIL3O43854 480 aa15.4■□□□□ 0.06
PDLIM2-213ENST00000448520 BRD1O95696 1058 aa15.4■□□□□ 0.06
PDLIM2-213ENST00000448520 ZSCAN22P10073 491 aaPredicted RBP15.4■□□□□ 0.06
PDLIM2-213ENST00000448520 DARSP14868 501 aaKnown RBP15.4■□□□□ 0.06
PDLIM2-213ENST00000448520 TBC1D8BQ0IIM8 1120 aa15.4■□□□□ 0.06
PDLIM2-213ENST00000448520 BMS1Q14692 1282 aaKnown RBP15.4■□□□□ 0.06
PDLIM2-213ENST00000448520 FOXD4L6Q3SYB3 417 aaPredicted RBP15.4■□□□□ 0.06
PDLIM2-213ENST00000448520 Q4G0T1 1027 aa15.4■□□□□ 0.06
PDLIM2-213ENST00000448520 LRCH2Q5VUJ6 765 aa15.4■□□□□ 0.06
PDLIM2-213ENST00000448520 GALNT17Q6IS24 598 aa15.4■□□□□ 0.06
PDLIM2-213ENST00000448520 KCNT2Q6UVM3 1135 aa15.4■□□□□ 0.06
PDLIM2-213ENST00000448520 FOXD4L3Q6VB84 417 aaPredicted RBP15.4■□□□□ 0.06
PDLIM2-213ENST00000448520 PIK3AP1Q6ZUJ8 805 aa15.4■□□□□ 0.06
PDLIM2-213ENST00000448520 HFE2Q6ZVN8 426 aa15.4■□□□□ 0.06
PDLIM2-213ENST00000448520 ECHDC2Q86YB7 292 aa15.4■□□□□ 0.06
PDLIM2-213ENST00000448520 FAM177A1Q8N128 213 aaPredicted RBP15.4■□□□□ 0.06
PDLIM2-213ENST00000448520 LRRC71Q8N4P6 559 aa15.4■□□□□ 0.06
PDLIM2-213ENST00000448520 RSPH1Q8WYR4 309 aa15.4■□□□□ 0.06
PDLIM2-213ENST00000448520 ZNF558Q96NG5 402 aa15.4■□□□□ 0.06
PDLIM2-213ENST00000448520 NIFKQ9BYG3 293 aaKnown RBP15.4■□□□□ 0.06
PDLIM2-213ENST00000448520 CHST12Q9NRB3 414 aa15.4■□□□□ 0.06
PDLIM2-213ENST00000448520 CYP3A7-CYP3A51PA0A087WV96 503 aa15.39■□□□□ 0.05
PDLIM2-213ENST00000448520 CARNS1A5YM72 827 aa15.39■□□□□ 0.05
PDLIM2-213ENST00000448520 F13A1P00488 732 aa15.39■□□□□ 0.05
PDLIM2-213ENST00000448520 HOXB8P17481 243 aaPredicted RBP15.39■□□□□ 0.05
PDLIM2-213ENST00000448520 CYP3A7P24462 503 aa15.39■□□□□ 0.05
PDLIM2-213ENST00000448520 DNM2P50570 870 aa15.39■□□□□ 0.05
PDLIM2-213ENST00000448520 GPC3P51654 580 aa15.39■□□□□ 0.05
PDLIM2-213ENST00000448520 PRKCEQ02156 737 aa15.39■□□□□ 0.05
PDLIM2-213ENST00000448520 GNL2Q13823 731 aaKnown RBP15.39■□□□□ 0.05
PDLIM2-213ENST00000448520 TARBP2Q15633 366 aaKnown RBP15.39■□□□□ 0.05
PDLIM2-213ENST00000448520 INF2Q27J81 1249 aa15.39■□□□□ 0.05
PDLIM2-213ENST00000448520 XKR3Q5GH77 459 aa15.39■□□□□ 0.05
PDLIM2-213ENST00000448520 LRRC55Q6ZSA7 311 aa15.39■□□□□ 0.05
PDLIM2-213ENST00000448520 LRRC43Q8N309 656 aa15.39■□□□□ 0.05
PDLIM2-213ENST00000448520 TBCKQ8TEA7 893 aa15.39■□□□□ 0.05
PDLIM2-213ENST00000448520 SUSD6Q92537 303 aa15.39■□□□□ 0.05
PDLIM2-213ENST00000448520 SCLT1Q96NL6 688 aa15.39■□□□□ 0.05
PDLIM2-213ENST00000448520 GCOM2Q9BZD3 368 aaPredicted RBP15.39■□□□□ 0.05
PDLIM2-213ENST00000448520 INO80BQ9C086 356 aaPredicted RBP15.39■□□□□ 0.05
PDLIM2-213ENST00000448520 BRMS1Q9HCU9 246 aa15.39■□□□□ 0.05
PDLIM2-213ENST00000448520 SPG21Q9NZD8 308 aa15.39■□□□□ 0.05
PDLIM2-213ENST00000448520 PCDHGC5Q9Y5F6 944 aa15.39■□□□□ 0.05
PDLIM2-213ENST00000448520 CCDC194A0A1B0GVG4 234 aa15.38■□□□□ 0.05
PDLIM2-213ENST00000448520 PSMD10O75832 226 aa15.38■□□□□ 0.05
PDLIM2-213ENST00000448520 ATP2B1P20020 1258 aa15.38■□□□□ 0.05
PDLIM2-213ENST00000448520 U2AF2P26368 475 aaKnown RBP eCLIP15.38■□□□□ 0.05
PDLIM2-213ENST00000448520 KCNC3Q14003 757 aa15.38■□□□□ 0.05
PDLIM2-213ENST00000448520 NBR1Q14596 966 aa15.38■□□□□ 0.05
PDLIM2-213ENST00000448520 MOXD1Q6UVY6 613 aa15.38■□□□□ 0.05
PDLIM2-213ENST00000448520 TRIM67Q6ZTA4 783 aa15.38■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 61.1 ms