RNA–Protein interactions for RNA: ENST00000447669.6

RFFL-206, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

APPRIS P1 TSL 5 BASIC

Gene RFFL, Length 2,030 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-206ENST00000447669 C22orf31O95567 290 aa27.35■■□□□ 1.97
RFFL-206ENST00000447669 MAPTP10636 758 aaKnown RBP27.35■■□□□ 1.97
RFFL-206ENST00000447669 TAS1R3Q7RTX0 852 aa27.35■■□□□ 1.97
RFFL-206ENST00000447669 PPP1R16BQ96T49 567 aa27.35■■□□□ 1.97
RFFL-206ENST00000447669 SETD4Q9NVD3 440 aa27.35■■□□□ 1.97
RFFL-206ENST00000447669 SAGE1Q9NXZ1 904 aa27.35■■□□□ 1.97
RFFL-206ENST00000447669 SEPT4O43236 478 aa27.34■■□□□ 1.97
RFFL-206ENST00000447669 CASP4P49662 377 aa27.34■■□□□ 1.97
RFFL-206ENST00000447669 COPB1P53618 953 aaKnown RBP27.34■■□□□ 1.97
RFFL-206ENST00000447669 CAPSQ13938 189 aa27.34■■□□□ 1.97
RFFL-206ENST00000447669 MAGEC2Q9UBF1 373 aaPredicted RBP27.34■■□□□ 1.97
RFFL-206ENST00000447669 TBX20Q9UMR3 447 aa27.34■■□□□ 1.97
RFFL-206ENST00000447669 A0A1B0GTH6 734 aa27.34■■□□□ 1.97
RFFL-206ENST00000447669 NR3C1P04150 777 aa27.34■■□□□ 1.97
RFFL-206ENST00000447669 CPT1AP50416 773 aa27.34■■□□□ 1.97
RFFL-206ENST00000447669 PPFIA1Q13136 1202 aa27.34■■□□□ 1.97
RFFL-206ENST00000447669 NR1I3Q14994 352 aa27.34■■□□□ 1.97
RFFL-206ENST00000447669 MARCH8Q5T0T0 291 aa27.34■■□□□ 1.97
RFFL-206ENST00000447669 STXBP4Q6ZWJ1 553 aa27.34■■□□□ 1.97
RFFL-206ENST00000447669 NOC3LQ8WTT2 800 aaKnown RBP27.34■■□□□ 1.97
RFFL-206ENST00000447669 SPIRE2Q8WWL2 714 aa27.34■■□□□ 1.97
RFFL-206ENST00000447669 C17orf75Q9HAS0 396 aa27.34■■□□□ 1.97
RFFL-206ENST00000447669 Q9Y3F1 56 aa27.34■■□□□ 1.97
RFFL-206ENST00000447669 F2P00734 622 aa27.33■■□□□ 1.97
RFFL-206ENST00000447669 SRGAP2CP0DJJ0 459 aa27.33■■□□□ 1.97
RFFL-206ENST00000447669 RTP1P59025 263 aa27.33■■□□□ 1.97
RFFL-206ENST00000447669 HIC1Q14526 733 aa27.33■■□□□ 1.97
RFFL-206ENST00000447669 GRIK4Q16099 956 aa27.33■■□□□ 1.97
RFFL-206ENST00000447669 ZNF484Q5JVG2 852 aa27.33■■□□□ 1.97
RFFL-206ENST00000447669 GNASQ5JWF2 1037 aa27.33■■□□□ 1.97
RFFL-206ENST00000447669 RHPN2Q8IUC4 686 aa27.33■■□□□ 1.97
RFFL-206ENST00000447669 ZSWIM2Q8NEG5 633 aa27.33■■□□□ 1.97
RFFL-206ENST00000447669 TUBGCP2Q9BSJ2 902 aa27.33■■□□□ 1.97
RFFL-206ENST00000447669 GBP3Q9H0R5 595 aa27.33■■□□□ 1.97
RFFL-206ENST00000447669 AGPAT3Q9NRZ7 376 aa27.33■■□□□ 1.97
RFFL-206ENST00000447669 SUCLA2Q9P2R7 463 aaPredicted RBP27.33■■□□□ 1.97
RFFL-206ENST00000447669 TRIP12Q14669 1992 aaPredicted RBP27.33■■□□□ 1.97
RFFL-206ENST00000447669 LRRC10BA6NIK2 292 aa27.33■■□□□ 1.96
RFFL-206ENST00000447669 CALUO43852 315 aaPredicted RBP27.33■■□□□ 1.96
RFFL-206ENST00000447669 PRKCSHP14314 528 aaPredicted RBP27.33■■□□□ 1.96
RFFL-206ENST00000447669 MTIF2P46199 727 aaKnown RBP27.33■■□□□ 1.96
RFFL-206ENST00000447669 EDRF1Q3B7T1 1238 aa27.33■■□□□ 1.96
RFFL-206ENST00000447669 TMC6Q7Z403 805 aa27.33■■□□□ 1.96
RFFL-206ENST00000447669 ACCSQ96QU6 501 aa27.33■■□□□ 1.96
RFFL-206ENST00000447669 ST6GALNAC4Q9H4F1 302 aa27.33■■□□□ 1.96
RFFL-206ENST00000447669 PCIF1Q9H4Z3 704 aa27.33■■□□□ 1.96
RFFL-206ENST00000447669 ARHGAP28Q9P2N2 729 aa27.33■■□□□ 1.96
RFFL-206ENST00000447669 TRIM17Q9Y577 477 aa27.33■■□□□ 1.96
RFFL-206ENST00000447669 PES1O00541 588 aaKnown RBP27.32■■□□□ 1.96
RFFL-206ENST00000447669 HMGCRP04035 888 aa27.32■■□□□ 1.96
RFFL-206ENST00000447669 EEF1GP26641 437 aaKnown RBP27.32■■□□□ 1.96
RFFL-206ENST00000447669 LAMTOR4Q0VGL1 99 aa27.32■■□□□ 1.96
RFFL-206ENST00000447669 FILIP1Q7Z7B0 1213 aa27.32■■□□□ 1.96
RFFL-206ENST00000447669 RTN4Q9NQC3 1192 aaKnown RBP27.32■■□□□ 1.96
RFFL-206ENST00000447669 ANKRD63C9JTQ0 380 aa27.31■■□□□ 1.96
RFFL-206ENST00000447669 N4BP3O15049 544 aa27.31■■□□□ 1.96
RFFL-206ENST00000447669 PTMAP06454 111 aaKnown RBP27.31■■□□□ 1.96
RFFL-206ENST00000447669 CYP2J2P51589 502 aa27.31■■□□□ 1.96
RFFL-206ENST00000447669 MFSD10Q14728 455 aa27.31■■□□□ 1.96
RFFL-206ENST00000447669 IER5Q5VY09 327 aa27.31■■□□□ 1.96
RFFL-206ENST00000447669 CEP135Q66GS9 1140 aa27.31■■□□□ 1.96
RFFL-206ENST00000447669 MTHFD1LQ6UB35 978 aa27.31■■□□□ 1.96
RFFL-206ENST00000447669 UBE4BO95155 1302 aa27.31■■□□□ 1.96
RFFL-206ENST00000447669 CBFA2T2O43439 604 aa27.31■■□□□ 1.96
RFFL-206ENST00000447669 AKAP3O75969 853 aa27.31■■□□□ 1.96
RFFL-206ENST00000447669 SMIM10L2AP0DMW4 78 aa27.31■■□□□ 1.96
RFFL-206ENST00000447669 SMIM10L2BP0DMW5 78 aa27.31■■□□□ 1.96
RFFL-206ENST00000447669 RARBP10826 455 aa27.31■■□□□ 1.96
RFFL-206ENST00000447669 CDC25BP30305 580 aa27.31■■□□□ 1.96
RFFL-206ENST00000447669 GJA9P57773 515 aa27.31■■□□□ 1.96
RFFL-206ENST00000447669 C1QTNF8P60827 252 aa27.31■■□□□ 1.96
RFFL-206ENST00000447669 PURAQ00577 322 aaKnown RBP27.31■■□□□ 1.96
RFFL-206ENST00000447669 SPAG1Q07617 926 aa27.31■■□□□ 1.96
RFFL-206ENST00000447669 PPP4R3CPQ6ZMV5 832 aa27.31■■□□□ 1.96
RFFL-206ENST00000447669 ZC3H3Q8IXZ2 948 aaKnown RBP27.31■■□□□ 1.96
RFFL-206ENST00000447669 DEPTORQ8TB45 409 aa27.31■■□□□ 1.96
RFFL-206ENST00000447669 ZNF830Q96NB3 372 aaPredicted RBP27.31■■□□□ 1.96
RFFL-206ENST00000447669 CBWD1Q9BRT8 395 aa27.31■■□□□ 1.96
RFFL-206ENST00000447669 PTCH2Q9Y6C5 1203 aa27.31■■□□□ 1.96
RFFL-206ENST00000447669 EDN1P05305 212 aa27.3■■□□□ 1.96
RFFL-206ENST00000447669 NAMPTP43490 491 aa27.3■■□□□ 1.96
RFFL-206ENST00000447669 PSEN2P49810 448 aa27.3■■□□□ 1.96
RFFL-206ENST00000447669 ZNF200P98182 395 aaPredicted RBP27.3■■□□□ 1.96
RFFL-206ENST00000447669 MAP2K1Q02750 393 aaPredicted RBP27.3■■□□□ 1.96
RFFL-206ENST00000447669 ARID5BQ14865 1188 aa27.3■■□□□ 1.96
RFFL-206ENST00000447669 CXCL17Q6UXB2 119 aa27.3■■□□□ 1.96
RFFL-206ENST00000447669 ARHGAP30Q7Z6I6 1101 aaPredicted RBP27.3■■□□□ 1.96
RFFL-206ENST00000447669 LMBR1Q8WVP7 490 aa27.3■■□□□ 1.96
RFFL-206ENST00000447669 PSPC1Q8WXF1 523 aaKnown RBP27.3■■□□□ 1.96
RFFL-206ENST00000447669 BEGAINQ9BUH8 593 aa27.3■■□□□ 1.96
RFFL-206ENST00000447669 PPME1Q9Y570 386 aa27.3■■□□□ 1.96
RFFL-206ENST00000447669 CETN3O15182 167 aa27.29■■□□□ 1.96
RFFL-206ENST00000447669 CCDC40Q4G0X9 1142 aa27.29■■□□□ 1.96
RFFL-206ENST00000447669 MIIPQ5JXC2 388 aa27.29■■□□□ 1.96
RFFL-206ENST00000447669 FOXR2Q6PJQ5 311 aa27.29■■□□□ 1.96
RFFL-206ENST00000447669 RNF149Q8NC42 400 aa27.29■■□□□ 1.96
RFFL-206ENST00000447669 NLRP4Q96MN2 994 aa27.29■■□□□ 1.96
RFFL-206ENST00000447669 XPNPEP3Q9NQH7 507 aa27.29■■□□□ 1.96
RFFL-206ENST00000447669 VTNP04004 478 aa27.29■■□□□ 1.96
RFFL-206ENST00000447669 ALCAMQ13740 583 aa27.29■■□□□ 1.96
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms