RNA–Protein interactions for RNA: ENST00000446877.5

PMS1-214, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 4

Gene PMS1, Length 560 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-214ENST00000446877 PRPF3O43395 683 aaKnown RBP27.48■■□□□ 1.99
PMS1-214ENST00000446877 CHMP2AO43633 222 aa27.48■■□□□ 1.99
PMS1-214ENST00000446877 GAS7O60861 476 aa27.48■■□□□ 1.99
PMS1-214ENST00000446877 BRD1O95696 1058 aa27.48■■□□□ 1.99
PMS1-214ENST00000446877 SFNP31947 248 aa27.48■■□□□ 1.99
PMS1-214ENST00000446877 RARS2Q5T160 578 aaKnown RBP27.48■■□□□ 1.99
PMS1-214ENST00000446877 VPS52Q8N1B4 723 aa27.48■■□□□ 1.99
PMS1-214ENST00000446877 TDRD5Q8NAT2 981 aaKnown RBP27.48■■□□□ 1.99
PMS1-214ENST00000446877 CCDC136Q96JN2 1154 aa27.48■■□□□ 1.99
PMS1-214ENST00000446877 RIT2Q99578 217 aa27.48■■□□□ 1.99
PMS1-214ENST00000446877 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP27.47■■□□□ 1.99
PMS1-214ENST00000446877 DNM2P50570 870 aa27.47■■□□□ 1.99
PMS1-214ENST00000446877 JAK3P52333 1124 aa27.47■■□□□ 1.99
PMS1-214ENST00000446877 GIT2Q14161 759 aa27.47■■□□□ 1.99
PMS1-214ENST00000446877 BMP2KLQ5H9B9 411 aa27.47■■□□□ 1.99
PMS1-214ENST00000446877 PLCD3Q8N3E9 789 aa27.47■■□□□ 1.99
PMS1-214ENST00000446877 LENG9Q96B70 501 aa27.47■■□□□ 1.99
PMS1-214ENST00000446877 DBR1Q9UK59 544 aaKnown RBP27.47■■□□□ 1.99
PMS1-214ENST00000446877 MSH4O15457 936 aa27.46■■□□□ 1.99
PMS1-214ENST00000446877 ZC3H11AO75152 810 aaKnown RBP eCLIP27.46■■□□□ 1.99
PMS1-214ENST00000446877 CSDE1O75534 798 aaKnown RBP27.46■■□□□ 1.99
PMS1-214ENST00000446877 WEE2P0C1S8 567 aa27.46■■□□□ 1.99
PMS1-214ENST00000446877 SKIP12755 728 aa27.46■■□□□ 1.99
PMS1-214ENST00000446877 LRCH2Q5VUJ6 765 aa27.46■■□□□ 1.99
PMS1-214ENST00000446877 C12orf76Q8N812 135 aaPredicted RBP27.46■■□□□ 1.99
PMS1-214ENST00000446877 CCDC148Q8NFR7 591 aa27.46■■□□□ 1.99
PMS1-214ENST00000446877 TEKT3Q9BXF9 490 aa27.46■■□□□ 1.99
PMS1-214ENST00000446877 MFSD1Q9H3U5 465 aa27.46■■□□□ 1.99
PMS1-214ENST00000446877 SFPQP23246 707 aaKnown RBP eCLIP27.45■■□□□ 1.98
PMS1-214ENST00000446877 PHKA2P46019 1235 aa27.45■■□□□ 1.98
PMS1-214ENST00000446877 USP11P51784 963 aa27.45■■□□□ 1.98
PMS1-214ENST00000446877 POLGP54098 1239 aaPredicted RBP27.45■■□□□ 1.98
PMS1-214ENST00000446877 UGCGQ16739 394 aa27.45■■□□□ 1.98
PMS1-214ENST00000446877 TWF2Q6IBS0 349 aaKnown RBP27.45■■□□□ 1.98
PMS1-214ENST00000446877 GLB1LQ6UWU2 654 aa27.45■■□□□ 1.98
PMS1-214ENST00000446877 Q6ZUG5 572 aa27.45■■□□□ 1.98
PMS1-214ENST00000446877 ZDHHC14Q8IZN3 488 aa27.45■■□□□ 1.98
PMS1-214ENST00000446877 LIMD1Q9UGP4 676 aa27.45■■□□□ 1.98
PMS1-214ENST00000446877 KIAA1841Q6NSI8 718 aa27.44■■□□□ 1.98
PMS1-214ENST00000446877 AUTS2Q8WXX7 1259 aa27.44■■□□□ 1.98
PMS1-214ENST00000446877 SLC5A5Q92911 643 aa27.44■■□□□ 1.98
PMS1-214ENST00000446877 BRF1Q92994 677 aa27.44■■□□□ 1.98
PMS1-214ENST00000446877 PHKBQ93100 1093 aa27.44■■□□□ 1.98
PMS1-214ENST00000446877 INO80BQ9C086 356 aaPredicted RBP27.44■■□□□ 1.98
PMS1-214ENST00000446877 ZBP1Q9H171 429 aa27.44■■□□□ 1.98
PMS1-214ENST00000446877 UNC45AQ9H3U1 944 aa27.44■■□□□ 1.98
PMS1-214ENST00000446877 SEPT9Q9UHD8 586 aaPredicted RBP27.44■■□□□ 1.98
PMS1-214ENST00000446877 USTQ9Y2C2 406 aa27.44■■□□□ 1.98
PMS1-214ENST00000446877 KMT2EQ8IZD2 1858 aa27.43■■□□□ 1.98
PMS1-214ENST00000446877 ASGR2P07307 311 aa27.43■■□□□ 1.98
PMS1-214ENST00000446877 RNASELQ05823 741 aaKnown RBP27.43■■□□□ 1.98
PMS1-214ENST00000446877 TARBP2Q15633 366 aaKnown RBP27.43■■□□□ 1.98
PMS1-214ENST00000446877 MTERF2Q49AM1 385 aa27.43■■□□□ 1.98
PMS1-214ENST00000446877 XKR3Q5GH77 459 aa27.43■■□□□ 1.98
PMS1-214ENST00000446877 DDX53Q86TM3 631 aaKnown RBP27.43■■□□□ 1.98
PMS1-214ENST00000446877 CABP7Q86V35 215 aa27.43■■□□□ 1.98
PMS1-214ENST00000446877 TMEM105Q8N8V8 129 aa27.43■■□□□ 1.98
PMS1-214ENST00000446877 RDM1Q8NG50 284 aa27.43■■□□□ 1.98
PMS1-214ENST00000446877 TRAIPQ9BWF2 469 aa27.43■■□□□ 1.98
PMS1-214ENST00000446877 IRAK3Q9Y616 596 aa27.43■■□□□ 1.98
PMS1-214ENST00000446877 PTPRZ1P23471 2315 aaPredicted RBP27.42■■□□□ 1.98
PMS1-214ENST00000446877 SPDYE4A6NLX3 237 aa27.42■■□□□ 1.98
PMS1-214ENST00000446877 PROB1E7EW31 1015 aa27.42■■□□□ 1.98
PMS1-214ENST00000446877 CTSAP10619 480 aa27.42■■□□□ 1.98
PMS1-214ENST00000446877 CPA1P15085 419 aa27.42■■□□□ 1.98
PMS1-214ENST00000446877 EPCAMP16422 314 aa27.42■■□□□ 1.98
PMS1-214ENST00000446877 DRP2Q13474 957 aa27.42■■□□□ 1.98
PMS1-214ENST00000446877 LONRF3Q496Y0 759 aa27.42■■□□□ 1.98
PMS1-214ENST00000446877 ASTLQ6HA08 431 aaPredicted RBP27.42■■□□□ 1.98
PMS1-214ENST00000446877 MIER3Q7Z3K6 550 aa27.42■■□□□ 1.98
PMS1-214ENST00000446877 PPFIBP1Q86W92 1011 aa27.42■■□□□ 1.98
PMS1-214ENST00000446877 LPPQ93052 612 aa27.42■■□□□ 1.98
PMS1-214ENST00000446877 IGSF21Q96ID5 467 aa27.42■■□□□ 1.98
PMS1-214ENST00000446877 NIFKQ9BYG3 293 aaKnown RBP27.42■■□□□ 1.98
PMS1-214ENST00000446877 SMOC2Q9H3U7 446 aa27.42■■□□□ 1.98
PMS1-214ENST00000446877 PIN4Q9Y237 131 aaKnown RBP27.42■■□□□ 1.98
PMS1-214ENST00000446877 INPP5FQ9Y2H2 1132 aa27.42■■□□□ 1.98
PMS1-214ENST00000446877 MYH9P35579 1960 aaKnown RBP27.41■■□□□ 1.98
PMS1-214ENST00000446877 A0A087WZ62 844 aa27.41■■□□□ 1.98
PMS1-214ENST00000446877 NOMO2Q5JPE7 1267 aa27.41■■□□□ 1.98
PMS1-214ENST00000446877 KANK3Q6NY19 840 aa27.41■■□□□ 1.98
PMS1-214ENST00000446877 TMC5Q6UXY8 1006 aa27.41■■□□□ 1.98
PMS1-214ENST00000446877 TMEM173Q86WV6 379 aaPredicted RBP27.41■■□□□ 1.98
PMS1-214ENST00000446877 ACSF2Q96CM8 615 aaPredicted RBP27.41■■□□□ 1.98
PMS1-214ENST00000446877 FDXACB1Q9BRP7 624 aaPredicted RBP27.41■■□□□ 1.98
PMS1-214ENST00000446877 SLC26A6Q9BXS9 759 aa27.41■■□□□ 1.98
PMS1-214ENST00000446877 RNF26Q9BY78 433 aaPredicted RBP27.41■■□□□ 1.98
PMS1-214ENST00000446877 TBC1D13Q9NVG8 400 aa27.41■■□□□ 1.98
PMS1-214ENST00000446877 VPS54Q9P1Q0 977 aa27.41■■□□□ 1.98
PMS1-214ENST00000446877 SUCLA2Q9P2R7 463 aaPredicted RBP27.41■■□□□ 1.98
PMS1-214ENST00000446877 GALTP07902 379 aa27.4■■□□□ 1.98
PMS1-214ENST00000446877 NLRP5P59047 1200 aa27.4■■□□□ 1.98
PMS1-214ENST00000446877 ZNF410Q86VK4 478 aa27.4■■□□□ 1.98
PMS1-214ENST00000446877 SLC22A17Q8WUG5 538 aa27.4■■□□□ 1.98
PMS1-214ENST00000446877 JAKMIP1Q96N16 626 aaKnown RBP27.4■■□□□ 1.98
PMS1-214ENST00000446877 GBP3Q9H0R5 595 aa27.4■■□□□ 1.98
PMS1-214ENST00000446877 NRDE2Q9H7Z3 1164 aa27.4■■□□□ 1.98
PMS1-214ENST00000446877 CYP26B1Q9NR63 512 aa27.4■■□□□ 1.98
PMS1-214ENST00000446877 RAB27AP51159 221 aa27.39■■□□□ 1.98
PMS1-214ENST00000446877 CLCN5P51795 746 aa27.39■■□□□ 1.98
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms