RNA–Protein interactions for RNA: ENST00000446852.5

SMC6-206, Transcript of structural maintenance of chromosomes 6, humanhuman

TSL 1 (best)

Gene SMC6, Length 2,460 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-206ENST00000446852 SPAG5Q96R06 1193 aa19.07■□□□□ 0.64
SMC6-206ENST00000446852 PJA2O43164 708 aa19.06■□□□□ 0.64
SMC6-206ENST00000446852 ICAM3P32942 547 aa19.06■□□□□ 0.64
SMC6-206ENST00000446852 NPTX2P47972 431 aa19.06■□□□□ 0.64
SMC6-206ENST00000446852 JAM2P57087 298 aa19.06■□□□□ 0.64
SMC6-206ENST00000446852 CHMP4BP1P59074 171 aa19.06■□□□□ 0.64
SMC6-206ENST00000446852 TTLL12Q14166 644 aaPredicted RBP19.06■□□□□ 0.64
SMC6-206ENST00000446852 DPY19L2Q6NUT2 758 aa19.06■□□□□ 0.64
SMC6-206ENST00000446852 CYFIP1Q7L576 1253 aa19.06■□□□□ 0.64
SMC6-206ENST00000446852 NCAPG2Q86XI2 1143 aa19.06■□□□□ 0.64
SMC6-206ENST00000446852 C12orf56Q8IXR9 622 aa19.06■□□□□ 0.64
SMC6-206ENST00000446852 TMEM161BQ8NDZ6 487 aa19.06■□□□□ 0.64
SMC6-206ENST00000446852 SALL4Q9UJQ4 1053 aa19.06■□□□□ 0.64
SMC6-206ENST00000446852 IGSF9BQ9UPX0 1349 aa19.06■□□□□ 0.64
SMC6-206ENST00000446852 A0A087X0T9 212 aa19.06■□□□□ 0.64
SMC6-206ENST00000446852 SOWAHBA6NEL2 793 aa19.06■□□□□ 0.64
SMC6-206ENST00000446852 CXCL11O14625 94 aa19.06■□□□□ 0.64
SMC6-206ENST00000446852 FAM228BP0C875 321 aa19.06■□□□□ 0.64
SMC6-206ENST00000446852 NF2P35240 595 aa19.06■□□□□ 0.64
SMC6-206ENST00000446852 IQCEQ6IPM2 695 aa19.06■□□□□ 0.64
SMC6-206ENST00000446852 SEPT9Q9UHD8 586 aaPredicted RBP19.06■□□□□ 0.64
SMC6-206ENST00000446852 KCNH4Q9UQ05 1017 aa19.06■□□□□ 0.64
SMC6-206ENST00000446852 SUPT20HL2P0C7V6 817 aa19.05■□□□□ 0.64
SMC6-206ENST00000446852 PTK2Q05397 1052 aa19.05■□□□□ 0.64
SMC6-206ENST00000446852 MOGSQ13724 837 aa19.05■□□□□ 0.64
SMC6-206ENST00000446852 SLC18A3Q16572 532 aa19.05■□□□□ 0.64
SMC6-206ENST00000446852 PAPD7Q5XG87 772 aaKnown RBP19.05■□□□□ 0.64
SMC6-206ENST00000446852 SEPT14Q6ZU15 432 aa19.05■□□□□ 0.64
SMC6-206ENST00000446852 CEP112Q8N8E3 955 aa19.05■□□□□ 0.64
SMC6-206ENST00000446852 GOLGA1Q92805 767 aa19.05■□□□□ 0.64
SMC6-206ENST00000446852 XPNPEP1Q9NQW7 623 aa19.05■□□□□ 0.64
SMC6-206ENST00000446852 PDLIM7Q9NR12 457 aa19.05■□□□□ 0.64
SMC6-206ENST00000446852 MCM3APO60318 1980 aa19.05■□□□□ 0.64
SMC6-206ENST00000446852 CCDC169A6NNP5 214 aa19.05■□□□□ 0.64
SMC6-206ENST00000446852 DKC1O60832 514 aaKnown RBP eCLIP19.05■□□□□ 0.64
SMC6-206ENST00000446852 MOCS3O95396 460 aa19.05■□□□□ 0.64
SMC6-206ENST00000446852 ZSCAN20P17040 1043 aaPredicted RBP19.05■□□□□ 0.64
SMC6-206ENST00000446852 DLG4P78352 724 aa19.05■□□□□ 0.64
SMC6-206ENST00000446852 WHAMMP3Q1A5X7 153 aa19.05■□□□□ 0.64
SMC6-206ENST00000446852 ANKRD13CQ8N6S4 541 aa19.05■□□□□ 0.64
SMC6-206ENST00000446852 ZC3H15Q8WU90 426 aaKnown RBP19.05■□□□□ 0.64
SMC6-206ENST00000446852 TXNRD2Q9NNW7 524 aa19.05■□□□□ 0.64
SMC6-206ENST00000446852 HSPBP1Q9NZL4 362 aa19.05■□□□□ 0.64
SMC6-206ENST00000446852 AGTPBP1Q9UPW5 1226 aa19.05■□□□□ 0.64
SMC6-206ENST00000446852 ZNFX1Q9P2E3 1918 aaKnown RBP19.04■□□□□ 0.64
SMC6-206ENST00000446852 SYNGAP1Q96PV0 1343 aa19.04■□□□□ 0.64
SMC6-206ENST00000446852 EDNRBP24530 442 aa19.04■□□□□ 0.64
SMC6-206ENST00000446852 DMP1Q13316 513 aaPredicted RBP19.04■□□□□ 0.64
SMC6-206ENST00000446852 PPIL2Q13356 520 aa19.04■□□□□ 0.64
SMC6-206ENST00000446852 MIS18BP1Q6P0N0 1132 aa19.04■□□□□ 0.64
SMC6-206ENST00000446852 CYP26B1Q9NR63 512 aa19.04■□□□□ 0.64
SMC6-206ENST00000446852 ADAMTS1Q9UHI8 967 aa19.04■□□□□ 0.64
SMC6-206ENST00000446852 TBX20Q9UMR3 447 aa19.04■□□□□ 0.64
SMC6-206ENST00000446852 SCN4AP35499 1836 aa19.04■□□□□ 0.64
SMC6-206ENST00000446852 ADGRA3Q8IWK6 1321 aa19.04■□□□□ 0.64
SMC6-206ENST00000446852 POTEB2H3BUK9 544 aa19.03■□□□□ 0.64
SMC6-206ENST00000446852 PNMA6AP0CW24 399 aaPredicted RBP19.03■□□□□ 0.64
SMC6-206ENST00000446852 ZNF571Q7Z3V5 609 aaPredicted RBP19.03■□□□□ 0.64
SMC6-206ENST00000446852 XXYLT1Q8NBI6 393 aa19.03■□□□□ 0.64
SMC6-206ENST00000446852 SLC17A8Q8NDX2 589 aa19.03■□□□□ 0.64
SMC6-206ENST00000446852 KIFAP3Q92845 792 aa19.03■□□□□ 0.64
SMC6-206ENST00000446852 OPTNQ96CV9 577 aa19.03■□□□□ 0.64
SMC6-206ENST00000446852 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP19.03■□□□□ 0.64
SMC6-206ENST00000446852 ATG7O95352 703 aa19.03■□□□□ 0.64
SMC6-206ENST00000446852 ATP4AP20648 1035 aa19.03■□□□□ 0.64
SMC6-206ENST00000446852 UBA1P22314 1058 aaKnown RBP19.03■□□□□ 0.64
SMC6-206ENST00000446852 SMTNP53814 917 aa19.03■□□□□ 0.64
SMC6-206ENST00000446852 MYL7Q01449 175 aa19.03■□□□□ 0.64
SMC6-206ENST00000446852 MAP4K3Q8IVH8 894 aa19.03■□□□□ 0.64
SMC6-206ENST00000446852 TRIM58Q8NG06 486 aa19.03■□□□□ 0.64
SMC6-206ENST00000446852 RABGGTAQ92696 567 aa19.03■□□□□ 0.64
SMC6-206ENST00000446852 KMT5AQ9NQR1 393 aa19.03■□□□□ 0.64
SMC6-206ENST00000446852 SAR1BQ9Y6B6 198 aa19.03■□□□□ 0.64
SMC6-206ENST00000446852 ANO9A1A5B4 782 aa19.02■□□□□ 0.64
SMC6-206ENST00000446852 DENND3A2RUS2 1198 aa19.02■□□□□ 0.64
SMC6-206ENST00000446852 ANKRD63C9JTQ0 380 aa19.02■□□□□ 0.64
SMC6-206ENST00000446852 SRGAP2O75044 1071 aa19.02■□□□□ 0.64
SMC6-206ENST00000446852 DGAT1O75907 488 aa19.02■□□□□ 0.64
SMC6-206ENST00000446852 ADSSP30520 456 aa19.02■□□□□ 0.64
SMC6-206ENST00000446852 PRKCIP41743 596 aa19.02■□□□□ 0.64
SMC6-206ENST00000446852 C1orf220Q5T0J3 134 aa19.02■□□□□ 0.64
SMC6-206ENST00000446852 INTS8Q75QN2 995 aaKnown RBP19.02■□□□□ 0.64
SMC6-206ENST00000446852 GPR161Q8N6U8 529 aaKnown RBP19.02■□□□□ 0.64
SMC6-206ENST00000446852 PLEKHO2Q8TD55 490 aa19.02■□□□□ 0.64
SMC6-206ENST00000446852 NTPCRQ9BSD7 190 aaKnown RBP19.02■□□□□ 0.64
SMC6-206ENST00000446852 CCDC94Q9BW85 323 aaPredicted RBP19.02■□□□□ 0.64
SMC6-206ENST00000446852 INTS2Q9H0H0 1204 aaKnown RBP19.02■□□□□ 0.64
SMC6-206ENST00000446852 CLCN6P51797 869 aa19.02■□□□□ 0.64
SMC6-206ENST00000446852 XKR3Q5GH77 459 aa19.02■□□□□ 0.64
SMC6-206ENST00000446852 SPIRE2Q8WWL2 714 aa19.02■□□□□ 0.64
SMC6-206ENST00000446852 ZNF446Q9NWS9 450 aa19.02■□□□□ 0.64
SMC6-206ENST00000446852 RBPJLQ9UBG7 517 aa19.02■□□□□ 0.64
SMC6-206ENST00000446852 MAFBQ9Y5Q3 323 aaPredicted RBP19.02■□□□□ 0.64
SMC6-206ENST00000446852 EMSYQ7Z589 1322 aa19.02■□□□□ 0.63
SMC6-206ENST00000446852 TACC1O75410 805 aa19.01■□□□□ 0.63
SMC6-206ENST00000446852 KRT13P13646 458 aa19.01■□□□□ 0.63
SMC6-206ENST00000446852 VAMP7P51809 220 aa19.01■□□□□ 0.63
SMC6-206ENST00000446852 SNRPFP62306 86 aaKnown RBP19.01■□□□□ 0.63
SMC6-206ENST00000446852 PPP3CAQ08209 521 aa19.01■□□□□ 0.63
SMC6-206ENST00000446852 MTERF2Q49AM1 385 aa19.01■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms