RNA–Protein interactions for RNA: ENST00000445369.2

CLDN9-201, Transcript of claudin 9, humanhuman

APPRIS P1 BASIC

Gene CLDN9, Length 2,050 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN9-201ENST00000445369 ZSCAN26Q16670 478 aa19.39■□□□□ 0.69
CLDN9-201ENST00000445369 FMNL3Q8IVF7 1028 aa19.39■□□□□ 0.69
CLDN9-201ENST00000445369 C12orf56Q8IXR9 622 aa19.39■□□□□ 0.69
CLDN9-201ENST00000445369 TSEN2Q8NCE0 465 aaKnown RBP19.39■□□□□ 0.69
CLDN9-201ENST00000445369 LMO3Q8TAP4 145 aa19.39■□□□□ 0.69
CLDN9-201ENST00000445369 RAVER2Q9HCJ3 691 aaKnown RBP19.39■□□□□ 0.69
CLDN9-201ENST00000445369 WDR81Q562E7 1941 aa19.38■□□□□ 0.69
CLDN9-201ENST00000445369 ZSCAN5CA6NGD5 496 aaPredicted RBP19.38■□□□□ 0.69
CLDN9-201ENST00000445369 RFX1P22670 979 aa19.38■□□□□ 0.69
CLDN9-201ENST00000445369 GALCP54803 685 aa19.38■□□□□ 0.69
CLDN9-201ENST00000445369 TNNC1P63316 161 aa19.38■□□□□ 0.69
CLDN9-201ENST00000445369 DGKZQ13574 1117 aa19.38■□□□□ 0.69
CLDN9-201ENST00000445369 PLS1Q14651 629 aa19.38■□□□□ 0.69
CLDN9-201ENST00000445369 CIAPIN1Q6FI81 312 aa19.38■□□□□ 0.69
CLDN9-201ENST00000445369 MAEAQ7L5Y9 396 aa19.38■□□□□ 0.69
CLDN9-201ENST00000445369 LMBR1Q8WVP7 490 aa19.38■□□□□ 0.69
CLDN9-201ENST00000445369 SH3GL2Q99962 352 aa19.38■□□□□ 0.69
CLDN9-201ENST00000445369 EPB41L5Q9HCM4 733 aa19.38■□□□□ 0.69
CLDN9-201ENST00000445369 PLS3P13797 630 aa19.37■□□□□ 0.69
CLDN9-201ENST00000445369 CARSP49589 748 aaKnown RBP19.37■□□□□ 0.69
CLDN9-201ENST00000445369 RNASE9P60153 205 aaKnown RBP19.37■□□□□ 0.69
CLDN9-201ENST00000445369 GUCY2DQ02846 1103 aa19.37■□□□□ 0.69
CLDN9-201ENST00000445369 PAK2Q13177 524 aa19.37■□□□□ 0.69
CLDN9-201ENST00000445369 GLYCTKQ8IVS8 523 aa19.37■□□□□ 0.69
CLDN9-201ENST00000445369 SAMD3Q8N6K7 520 aa19.37■□□□□ 0.69
CLDN9-201ENST00000445369 GOLGA6L1Q8N7Z2 621 aa19.37■□□□□ 0.69
CLDN9-201ENST00000445369 TBC1D22BQ9NU19 505 aa19.37■□□□□ 0.69
CLDN9-201ENST00000445369 SUCLA2Q9P2R7 463 aaPredicted RBP19.37■□□□□ 0.69
CLDN9-201ENST00000445369 RPS6KA5O75582 802 aa19.37■□□□□ 0.69
CLDN9-201ENST00000445369 PGM5Q15124 567 aa19.37■□□□□ 0.69
CLDN9-201ENST00000445369 PHLDB3Q6NSJ2 640 aa19.37■□□□□ 0.69
CLDN9-201ENST00000445369 PPP1R3FQ6ZSY5 799 aaPredicted RBP19.37■□□□□ 0.69
CLDN9-201ENST00000445369 INTS8Q75QN2 995 aaKnown RBP19.37■□□□□ 0.69
CLDN9-201ENST00000445369 PEX26Q7Z412 305 aa19.37■□□□□ 0.69
CLDN9-201ENST00000445369 SYCE1Q8N0S2 351 aa19.37■□□□□ 0.69
CLDN9-201ENST00000445369 METTL13Q8N6R0 699 aa19.37■□□□□ 0.69
CLDN9-201ENST00000445369 RDH13Q8NBN7 331 aa19.37■□□□□ 0.69
CLDN9-201ENST00000445369 SCFD2Q8WU76 684 aa19.37■□□□□ 0.69
CLDN9-201ENST00000445369 ACCSQ96QU6 501 aa19.37■□□□□ 0.69
CLDN9-201ENST00000445369 TAAR1Q96RJ0 339 aa19.37■□□□□ 0.69
CLDN9-201ENST00000445369 HOMER2Q9NSB8 354 aa19.37■□□□□ 0.69
CLDN9-201ENST00000445369 GINM1Q9NU53 330 aa19.37■□□□□ 0.69
CLDN9-201ENST00000445369 PPP1R9AQ9ULJ8 1098 aa19.37■□□□□ 0.69
CLDN9-201ENST00000445369 SAMM50Q9Y512 469 aa19.37■□□□□ 0.69
CLDN9-201ENST00000445369 DOCK1Q14185 1865 aa19.37■□□□□ 0.69
CLDN9-201ENST00000445369 ASTN2O75129 1339 aaPredicted RBP19.36■□□□□ 0.69
CLDN9-201ENST00000445369 ESYT3A0FGR9 886 aa19.36■□□□□ 0.69
CLDN9-201ENST00000445369 TISP43B9A030 160 aa19.36■□□□□ 0.69
CLDN9-201ENST00000445369 RAD51CO43502 376 aa19.36■□□□□ 0.69
CLDN9-201ENST00000445369 CLSTN1O94985 981 aa19.36■□□□□ 0.69
CLDN9-201ENST00000445369 TMEM253P0C7T8 217 aa19.36■□□□□ 0.69
CLDN9-201ENST00000445369 CCDC172P0C7W6 258 aa19.36■□□□□ 0.69
CLDN9-201ENST00000445369 KRT13P13646 458 aa19.36■□□□□ 0.69
CLDN9-201ENST00000445369 YWHABP31946 246 aaKnown RBP19.36■□□□□ 0.69
CLDN9-201ENST00000445369 RPS6P62753 249 aaKnown RBP19.36■□□□□ 0.69
CLDN9-201ENST00000445369 KIF22Q14807 665 aa19.36■□□□□ 0.69
CLDN9-201ENST00000445369 ALS2CLQ60I27 953 aa19.36■□□□□ 0.69
CLDN9-201ENST00000445369 NT5DC3Q86UY8 548 aa19.36■□□□□ 0.69
CLDN9-201ENST00000445369 CALR3Q96L12 384 aaKnown RBP19.36■□□□□ 0.69
CLDN9-201ENST00000445369 ST6GALNAC4Q9H4F1 302 aa19.36■□□□□ 0.69
CLDN9-201ENST00000445369 NFU1Q9UMS0 254 aa19.36■□□□□ 0.69
CLDN9-201ENST00000445369 CEP104O60308 925 aa19.36■□□□□ 0.69
CLDN9-201ENST00000445369 EIF2AK2P19525 551 aaKnown RBP19.36■□□□□ 0.69
CLDN9-201ENST00000445369 DLG4P78352 724 aa19.36■□□□□ 0.69
CLDN9-201ENST00000445369 TNFAIP1Q13829 316 aa19.36■□□□□ 0.69
CLDN9-201ENST00000445369 UGCGQ16739 394 aa19.36■□□□□ 0.69
CLDN9-201ENST00000445369 LEKR1Q6ZMV7 388 aa19.36■□□□□ 0.69
CLDN9-201ENST00000445369 RASGEF1CQ8N431 466 aa19.36■□□□□ 0.69
CLDN9-201ENST00000445369 CASKIN2Q8WXE0 1202 aa19.36■□□□□ 0.69
CLDN9-201ENST00000445369 RFFLQ8WZ73 363 aa19.36■□□□□ 0.69
CLDN9-201ENST00000445369 CBWD1Q9BRT8 395 aa19.36■□□□□ 0.69
CLDN9-201ENST00000445369 NOC2LQ9Y3T9 749 aaKnown RBP19.36■□□□□ 0.69
CLDN9-201ENST00000445369 EMSYQ7Z589 1322 aa19.35■□□□□ 0.69
CLDN9-201ENST00000445369 PGRMC1O00264 195 aaKnown RBP19.35■□□□□ 0.69
CLDN9-201ENST00000445369 P4HA2O15460 535 aa19.35■□□□□ 0.69
CLDN9-201ENST00000445369 VCAM1P19320 739 aa19.35■□□□□ 0.69
CLDN9-201ENST00000445369 GTF2BQ00403 316 aa19.35■□□□□ 0.69
CLDN9-201ENST00000445369 PTPROQ16827 1216 aa19.35■□□□□ 0.69
CLDN9-201ENST00000445369 C4orf19Q8IY42 314 aa19.35■□□□□ 0.69
CLDN9-201ENST00000445369 SLC16A10Q8TF71 515 aa19.35■□□□□ 0.69
CLDN9-201ENST00000445369 HES6Q96HZ4 224 aa19.35■□□□□ 0.69
CLDN9-201ENST00000445369 BUD13Q9BRD0 619 aaKnown RBP eCLIP19.35■□□□□ 0.69
CLDN9-201ENST00000445369 TIPINQ9BVW5 301 aa19.35■□□□□ 0.69
CLDN9-201ENST00000445369 PCIF1Q9H4Z3 704 aa19.35■□□□□ 0.69
CLDN9-201ENST00000445369 COL11A1P12107 1806 aaPredicted RBP19.34■□□□□ 0.69
CLDN9-201ENST00000445369 CTNND1O60716 968 aaKnown RBP19.34■□□□□ 0.69
CLDN9-201ENST00000445369 EGFRP00533 1210 aa19.34■□□□□ 0.69
CLDN9-201ENST00000445369 VAMP7P51809 220 aa19.34■□□□□ 0.69
CLDN9-201ENST00000445369 ZNF280AP59817 542 aaPredicted RBP19.34■□□□□ 0.69
CLDN9-201ENST00000445369 PPP3CAQ08209 521 aa19.34■□□□□ 0.69
CLDN9-201ENST00000445369 ARHGAP44Q17R89 818 aa19.34■□□□□ 0.69
CLDN9-201ENST00000445369 DAAM2Q86T65 1068 aa19.34■□□□□ 0.69
CLDN9-201ENST00000445369 KLHL7Q8IXQ5 586 aa19.34■□□□□ 0.69
CLDN9-201ENST00000445369 MREGQ8N565 214 aa19.34■□□□□ 0.69
CLDN9-201ENST00000445369 PLEKHA4Q9H4M7 779 aa19.34■□□□□ 0.69
CLDN9-201ENST00000445369 OSGEPQ9NPF4 335 aa19.34■□□□□ 0.69
CLDN9-201ENST00000445369 BRCA1P38398 1863 aaKnown RBP19.34■□□□□ 0.69
CLDN9-201ENST00000445369 IGSF9BQ9UPX0 1349 aa19.34■□□□□ 0.69
CLDN9-201ENST00000445369 GOLGA6CA6NDK9 693 aa19.34■□□□□ 0.69
CLDN9-201ENST00000445369 TMCO5BA8MYB1 307 aa19.34■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms