RNA–Protein interactions for RNA: ENST00000445064.1

SEC13-213, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 5

Gene SEC13, Length 669 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-213ENST00000445064 SPG21Q9NZD8 308 aa17.36■□□□□ 0.37
SEC13-213ENST00000445064 DDX25Q9UHL0 483 aaKnown RBP17.36■□□□□ 0.37
SEC13-213ENST00000445064 IGKV6-21A0A0C4DH24 114 aa17.35■□□□□ 0.37
SEC13-213ENST00000445064 NT5C1B-RDH14C9J2C7 533 aa17.35■□□□□ 0.37
SEC13-213ENST00000445064 EML1O00423 815 aa17.35■□□□□ 0.37
SEC13-213ENST00000445064 ATF7P17544 494 aaPredicted RBP17.35■□□□□ 0.37
SEC13-213ENST00000445064 TECP42680 631 aa17.35■□□□□ 0.37
SEC13-213ENST00000445064 CDC42EP1Q00587 391 aa17.35■□□□□ 0.37
SEC13-213ENST00000445064 KCNC3Q14003 757 aa17.35■□□□□ 0.37
SEC13-213ENST00000445064 LETM2Q2VYF4 491 aa17.35■□□□□ 0.37
SEC13-213ENST00000445064 LONRF3Q496Y0 759 aa17.35■□□□□ 0.37
SEC13-213ENST00000445064 GALNT17Q6IS24 598 aa17.35■□□□□ 0.37
SEC13-213ENST00000445064 MOXD1Q6UVY6 613 aa17.35■□□□□ 0.37
SEC13-213ENST00000445064 TMEM184AQ6ZMB5 413 aa17.35■□□□□ 0.37
SEC13-213ENST00000445064 RHPN2Q8IUC4 686 aa17.35■□□□□ 0.37
SEC13-213ENST00000445064 KSR1Q8IVT5 923 aa17.35■□□□□ 0.37
SEC13-213ENST00000445064 S1PR5Q9H228 398 aa17.35■□□□□ 0.37
SEC13-213ENST00000445064 NGRNQ9NPE2 291 aaKnown RBP17.35■□□□□ 0.37
SEC13-213ENST00000445064 DACT1Q9NYF0 836 aa17.35■□□□□ 0.37
SEC13-213ENST00000445064 SUCLA2Q9P2R7 463 aaPredicted RBP17.35■□□□□ 0.37
SEC13-213ENST00000445064 FSD2A1L4K1 749 aa17.34■□□□□ 0.37
SEC13-213ENST00000445064 SLC37A4O43826 429 aa17.34■□□□□ 0.37
SEC13-213ENST00000445064 MAFO75444 373 aaPredicted RBP17.34■□□□□ 0.37
SEC13-213ENST00000445064 PPM1AP35813 382 aa17.34■□□□□ 0.37
SEC13-213ENST00000445064 PSMC5P62195 406 aa17.34■□□□□ 0.37
SEC13-213ENST00000445064 PLA2G4FQ68DD2 849 aa17.34■□□□□ 0.37
SEC13-213ENST00000445064 ANKRD54Q6NXT1 300 aa17.34■□□□□ 0.37
SEC13-213ENST00000445064 ANO5Q75V66 913 aa17.34■□□□□ 0.37
SEC13-213ENST00000445064 KRT25Q7Z3Z0 450 aa17.34■□□□□ 0.37
SEC13-213ENST00000445064 SLC39A11Q8N1S5 342 aa17.34■□□□□ 0.37
SEC13-213ENST00000445064 SUSD6Q92537 303 aa17.34■□□□□ 0.37
SEC13-213ENST00000445064 SLKQ9H2G2 1235 aaPredicted RBP17.34■□□□□ 0.37
SEC13-213ENST00000445064 CHST12Q9NRB3 414 aa17.34■□□□□ 0.37
SEC13-213ENST00000445064 GJB4Q9NTQ9 266 aa17.34■□□□□ 0.37
SEC13-213ENST00000445064 PHKA2P46019 1235 aa17.33■□□□□ 0.36
SEC13-213ENST00000445064 BCAR1P56945 870 aa17.33■□□□□ 0.36
SEC13-213ENST00000445064 SCRN1Q12765 414 aa17.33■□□□□ 0.36
SEC13-213ENST00000445064 CBX2Q14781 532 aaPredicted RBP17.33■□□□□ 0.36
SEC13-213ENST00000445064 SYCE2Q6PIF2 218 aa17.33■□□□□ 0.36
SEC13-213ENST00000445064 ALYREFQ86V81 257 aaKnown RBP17.33■□□□□ 0.36
SEC13-213ENST00000445064 MRPL43Q8N983 215 aaKnown RBP17.33■□□□□ 0.36
SEC13-213ENST00000445064 ZNF579Q8NAF0 562 aaKnown RBP17.33■□□□□ 0.36
SEC13-213ENST00000445064 LPPQ93052 612 aa17.33■□□□□ 0.36
SEC13-213ENST00000445064 MFSD14AQ96MC6 490 aa17.33■□□□□ 0.36
SEC13-213ENST00000445064 FBXL18Q96ME1 805 aa17.33■□□□□ 0.36
SEC13-213ENST00000445064 PHF20Q9BVI0 1012 aa17.33■□□□□ 0.36
SEC13-213ENST00000445064 INO80BQ9C086 356 aaPredicted RBP17.33■□□□□ 0.36
SEC13-213ENST00000445064 CCDC194A0A1B0GVG4 234 aa17.32■□□□□ 0.36
SEC13-213ENST00000445064 SRGAP2BP0DMP2 458 aa17.32■□□□□ 0.36
SEC13-213ENST00000445064 SFPQP23246 707 aaKnown RBP eCLIP17.32■□□□□ 0.36
SEC13-213ENST00000445064 CA8P35219 290 aa17.32■□□□□ 0.36
SEC13-213ENST00000445064 ALDH7A1P49419 539 aaKnown RBP17.32■□□□□ 0.36
SEC13-213ENST00000445064 NPEPPSP55786 919 aa17.32■□□□□ 0.36
SEC13-213ENST00000445064 ZXDAP98168 799 aa17.32■□□□□ 0.36
SEC13-213ENST00000445064 TWF2Q6IBS0 349 aaKnown RBP17.32■□□□□ 0.36
SEC13-213ENST00000445064 TRIM67Q6ZTA4 783 aa17.32■□□□□ 0.36
SEC13-213ENST00000445064 ZNF410Q86VK4 478 aa17.32■□□□□ 0.36
SEC13-213ENST00000445064 FAM177A1Q8N128 213 aaPredicted RBP17.32■□□□□ 0.36
SEC13-213ENST00000445064 NLRP4Q96MN2 994 aa17.32■□□□□ 0.36
SEC13-213ENST00000445064 PIN4Q9Y237 131 aaKnown RBP17.32■□□□□ 0.36
SEC13-213ENST00000445064 C2orf71A6NGG8 1288 aa17.31■□□□□ 0.36
SEC13-213ENST00000445064 MEIS3P2A8K0S8 358 aa17.31■□□□□ 0.36
SEC13-213ENST00000445064 CCNT1O60563 726 aaKnown RBP17.31■□□□□ 0.36
SEC13-213ENST00000445064 CXCL14O95715 111 aa17.31■□□□□ 0.36
SEC13-213ENST00000445064 QARSP47897 775 aaKnown RBP17.31■□□□□ 0.36
SEC13-213ENST00000445064 PPP2R5CQ13362 524 aa17.31■□□□□ 0.36
SEC13-213ENST00000445064 SMC1AQ14683 1233 aaKnown RBP17.31■□□□□ 0.36
SEC13-213ENST00000445064 CATSPER4Q7RTX7 472 aa17.31■□□□□ 0.36
SEC13-213ENST00000445064 NEK8Q86SG6 692 aa17.31■□□□□ 0.36
SEC13-213ENST00000445064 OXER1Q8TDS5 423 aa17.31■□□□□ 0.36
SEC13-213ENST00000445064 PBXIP1Q96AQ6 731 aa17.31■□□□□ 0.36
SEC13-213ENST00000445064 FAM20AQ96MK3 541 aa17.31■□□□□ 0.36
SEC13-213ENST00000445064 TRAIPQ9BWF2 469 aa17.31■□□□□ 0.36
SEC13-213ENST00000445064 MRPL9Q9BYD2 267 aaKnown RBP17.31■□□□□ 0.36
SEC13-213ENST00000445064 KCNMB3Q9NPA1 279 aa17.31■□□□□ 0.36
SEC13-213ENST00000445064 CYP26B1Q9NR63 512 aa17.31■□□□□ 0.36
SEC13-213ENST00000445064 WRAP73Q9P2S5 460 aaPredicted RBP17.31■□□□□ 0.36
SEC13-213ENST00000445064 VAV3Q9UKW4 847 aa17.31■□□□□ 0.36
SEC13-213ENST00000445064 TMEM221A6NGB7 291 aa17.3■□□□□ 0.36
SEC13-213ENST00000445064 M0R296 226 aa17.3■□□□□ 0.36
SEC13-213ENST00000445064 ZC3H11AO75152 810 aaKnown RBP eCLIP17.3■□□□□ 0.36
SEC13-213ENST00000445064 CDKL5O76039 1030 aa17.3■□□□□ 0.36
SEC13-213ENST00000445064 SKIP12755 728 aa17.3■□□□□ 0.36
SEC13-213ENST00000445064 SP100P23497 879 aaPredicted RBP17.3■□□□□ 0.36
SEC13-213ENST00000445064 PPP4R3AQ6IN85 833 aa17.3■□□□□ 0.36
SEC13-213ENST00000445064 PIK3AP1Q6ZUJ8 805 aa17.3■□□□□ 0.36
SEC13-213ENST00000445064 BMP8AQ7Z5Y6 402 aa17.3■□□□□ 0.36
SEC13-213ENST00000445064 HAS1Q92839 578 aa17.3■□□□□ 0.36
SEC13-213ENST00000445064 TMEM169Q96HH4 297 aa17.3■□□□□ 0.36
SEC13-213ENST00000445064 CEP170P1Q96L14 293 aa17.3■□□□□ 0.36
SEC13-213ENST00000445064 JPH2Q9BR39 696 aaPredicted RBP17.3■□□□□ 0.36
SEC13-213ENST00000445064 NRDE2Q9H7Z3 1164 aa17.3■□□□□ 0.36
SEC13-213ENST00000445064 IFT122Q9HBG6 1241 aa17.3■□□□□ 0.36
SEC13-213ENST00000445064 FAM105AQ9NUU6 356 aa17.3■□□□□ 0.36
SEC13-213ENST00000445064 CDH22Q9UJ99 828 aa17.3■□□□□ 0.36
SEC13-213ENST00000445064 TPCN1Q9ULQ1 816 aa17.3■□□□□ 0.36
SEC13-213ENST00000445064 INPP5FQ9Y2H2 1132 aa17.3■□□□□ 0.36
SEC13-213ENST00000445064 MARCH6O60337 910 aa17.29■□□□□ 0.36
SEC13-213ENST00000445064 CLASP2O75122 1294 aaKnown RBP17.29■□□□□ 0.36
SEC13-213ENST00000445064 OFD1O75665 1012 aa17.29■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms