RNA–Protein interactions for RNA: ENST00000443016.1

USP6NL-203, Transcript of USP6 N-terminal like, humanhuman

TSL 2

Gene USP6NL, Length 2,491 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-203ENST00000443016 NCAPH2Q6IBW4 605 aa9.8□□□□□ -0.84
USP6NL-203ENST00000443016 B3GNT9Q6UX72 402 aa9.8□□□□□ -0.84
USP6NL-203ENST00000443016 RHPN2Q8IUC4 686 aa9.8□□□□□ -0.84
USP6NL-203ENST00000443016 DIS3L2Q8IYB7 885 aaKnown RBP9.8□□□□□ -0.84
USP6NL-203ENST00000443016 ABI1Q8IZP0 508 aa9.8□□□□□ -0.84
USP6NL-203ENST00000443016 CRIPAKQ8N1N5 446 aa9.8□□□□□ -0.84
USP6NL-203ENST00000443016 GCOM2Q9BZD3 368 aaPredicted RBP9.8□□□□□ -0.84
USP6NL-203ENST00000443016 TCF20Q9UGU0 1960 aaKnown RBP9.79□□□□□ -0.84
USP6NL-203ENST00000443016 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP9.79□□□□□ -0.84
USP6NL-203ENST00000443016 FAM205CA6NFA0 338 aa9.79□□□□□ -0.84
USP6NL-203ENST00000443016 BTBD18B2RXH4 712 aa9.79□□□□□ -0.84
USP6NL-203ENST00000443016 CSDE1O75534 798 aaKnown RBP9.79□□□□□ -0.84
USP6NL-203ENST00000443016 MMP1P03956 469 aa9.79□□□□□ -0.84
USP6NL-203ENST00000443016 HMGN5P82970 282 aaKnown RBP9.79□□□□□ -0.84
USP6NL-203ENST00000443016 DRP2Q13474 957 aa9.79□□□□□ -0.84
USP6NL-203ENST00000443016 TARBP2Q15633 366 aaKnown RBP9.79□□□□□ -0.84
USP6NL-203ENST00000443016 EARS2Q5JPH6 523 aaKnown RBP9.79□□□□□ -0.84
USP6NL-203ENST00000443016 FAM102BQ5T8I3 360 aa9.79□□□□□ -0.84
USP6NL-203ENST00000443016 PLA2G4FQ68DD2 849 aa9.79□□□□□ -0.84
USP6NL-203ENST00000443016 ANO5Q75V66 913 aa9.79□□□□□ -0.84
USP6NL-203ENST00000443016 PPP2R3CQ969Q6 453 aa9.79□□□□□ -0.84
USP6NL-203ENST00000443016 CEP170P1Q96L14 293 aa9.79□□□□□ -0.84
USP6NL-203ENST00000443016 LMAN2LQ9H0V9 348 aa9.79□□□□□ -0.84
USP6NL-203ENST00000443016 ADAMTS10Q9H324 1103 aa9.79□□□□□ -0.84
USP6NL-203ENST00000443016 AAASQ9NRG9 546 aa9.79□□□□□ -0.84
USP6NL-203ENST00000443016 TMEM161AQ9NX61 479 aa9.79□□□□□ -0.84
USP6NL-203ENST00000443016 CLDND1Q9NY35 253 aa9.79□□□□□ -0.84
USP6NL-203ENST00000443016 SUCLA2Q9P2R7 463 aaPredicted RBP9.79□□□□□ -0.84
USP6NL-203ENST00000443016 VAV3Q9UKW4 847 aa9.79□□□□□ -0.84
USP6NL-203ENST00000443016 SMC3Q9UQE7 1217 aa9.79□□□□□ -0.84
USP6NL-203ENST00000443016 PCDHB12Q9Y5F1 795 aa9.79□□□□□ -0.84
USP6NL-203ENST00000443016 LOXHD1Q8IVV2 1947 aa9.79□□□□□ -0.84
USP6NL-203ENST00000443016 C9IYK1 514 aa9.79□□□□□ -0.84
USP6NL-203ENST00000443016 H3BQ06 376 aaPredicted RBP9.79□□□□□ -0.84
USP6NL-203ENST00000443016 GPR37O15354 613 aa9.79□□□□□ -0.84
USP6NL-203ENST00000443016 LINC00271P0C7V0 271 aa9.79□□□□□ -0.84
USP6NL-203ENST00000443016 FGFR1P11362 822 aa9.79□□□□□ -0.84
USP6NL-203ENST00000443016 DARSP14868 501 aaKnown RBP9.79□□□□□ -0.84
USP6NL-203ENST00000443016 ATP2B1P20020 1258 aa9.79□□□□□ -0.84
USP6NL-203ENST00000443016 FGFR4P22455 802 aa9.79□□□□□ -0.84
USP6NL-203ENST00000443016 POLGP54098 1239 aaPredicted RBP9.79□□□□□ -0.84
USP6NL-203ENST00000443016 CYP4A11Q02928 519 aa9.79□□□□□ -0.84
USP6NL-203ENST00000443016 SMYD5Q6GMV2 418 aa9.79□□□□□ -0.84
USP6NL-203ENST00000443016 OTUD6AQ7L8S5 288 aa9.79□□□□□ -0.84
USP6NL-203ENST00000443016 LINC01465Q8N7H1 131 aa9.79□□□□□ -0.84
USP6NL-203ENST00000443016 KLHL23Q8NBE8 558 aa9.79□□□□□ -0.84
USP6NL-203ENST00000443016 MICAL1Q8TDZ2 1067 aa9.79□□□□□ -0.84
USP6NL-203ENST00000443016 HAS1Q92839 578 aa9.79□□□□□ -0.84
USP6NL-203ENST00000443016 P2RX5Q93086 422 aa9.79□□□□□ -0.84
USP6NL-203ENST00000443016 NLRP4Q96MN2 994 aa9.79□□□□□ -0.84
USP6NL-203ENST00000443016 LXNQ9BS40 222 aa9.79□□□□□ -0.84
USP6NL-203ENST00000443016 INO80BQ9C086 356 aaPredicted RBP9.79□□□□□ -0.84
USP6NL-203ENST00000443016 CYP26B1Q9NR63 512 aa9.79□□□□□ -0.84
USP6NL-203ENST00000443016 DACT1Q9NYF0 836 aa9.79□□□□□ -0.84
USP6NL-203ENST00000443016 PCDHA12Q9UN75 941 aa9.79□□□□□ -0.84
USP6NL-203ENST00000443016 PLAGL2Q9UPG8 496 aa9.79□□□□□ -0.84
USP6NL-203ENST00000443016 COL4A6Q14031 1691 aa9.79□□□□□ -0.84
USP6NL-203ENST00000443016 HOXA2O43364 376 aa9.78□□□□□ -0.84
USP6NL-203ENST00000443016 MAFO75444 373 aaPredicted RBP9.78□□□□□ -0.84
USP6NL-203ENST00000443016 SFPQP23246 707 aaKnown RBP eCLIP9.78□□□□□ -0.84
USP6NL-203ENST00000443016 NPEPPSP55786 919 aa9.78□□□□□ -0.84
USP6NL-203ENST00000443016 GUCY1B3Q02153 619 aa9.78□□□□□ -0.84
USP6NL-203ENST00000443016 GNL2Q13823 731 aaKnown RBP9.78□□□□□ -0.84
USP6NL-203ENST00000443016 CALCRLQ16602 461 aa9.78□□□□□ -0.84
USP6NL-203ENST00000443016 NAALADL2Q58DX5 795 aa9.78□□□□□ -0.84
USP6NL-203ENST00000443016 TPH2Q8IWU9 490 aa9.78□□□□□ -0.84
USP6NL-203ENST00000443016 EXOC8Q8IYI6 725 aa9.78□□□□□ -0.84
USP6NL-203ENST00000443016 CCDC43Q96MW1 224 aaKnown RBP9.78□□□□□ -0.84
USP6NL-203ENST00000443016 IGFLR1Q9H665 355 aa9.78□□□□□ -0.84
USP6NL-203ENST00000443016 BMP2KQ9NSY1 1161 aaPredicted RBP9.78□□□□□ -0.84
USP6NL-203ENST00000443016 RGL1Q9NZL6 768 aa9.78□□□□□ -0.84
USP6NL-203ENST00000443016 A0A087WZ62 844 aa9.78□□□□□ -0.84
USP6NL-203ENST00000443016 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP9.78□□□□□ -0.84
USP6NL-203ENST00000443016 ANKRD62A6NC57 917 aa9.78□□□□□ -0.84
USP6NL-203ENST00000443016 NCK2O43639 380 aa9.78□□□□□ -0.84
USP6NL-203ENST00000443016 NEMFO60524 1076 aa9.78□□□□□ -0.84
USP6NL-203ENST00000443016 YWHABP31946 246 aaKnown RBP9.78□□□□□ -0.84
USP6NL-203ENST00000443016 NUBP1P53384 320 aa9.78□□□□□ -0.84
USP6NL-203ENST00000443016 EPHA7Q15375 998 aa9.78□□□□□ -0.84
USP6NL-203ENST00000443016 THNSL1Q8IYQ7 743 aa9.78□□□□□ -0.84
USP6NL-203ENST00000443016 FAM184AQ8NB25 1140 aa9.78□□□□□ -0.84
USP6NL-203ENST00000443016 PABPC5Q96DU9 382 aaKnown RBP9.78□□□□□ -0.84
USP6NL-203ENST00000443016 FDXACB1Q9BRP7 624 aaPredicted RBP9.78□□□□□ -0.84
USP6NL-203ENST00000443016 ELAC1Q9H777 363 aaKnown RBP9.78□□□□□ -0.84
USP6NL-203ENST00000443016 ZSWIM4Q9H7M6 989 aa9.78□□□□□ -0.84
USP6NL-203ENST00000443016 TYW1Q9NV66 732 aaKnown RBP9.78□□□□□ -0.84
USP6NL-203ENST00000443016 ITGB1P05556 798 aa9.77□□□□□ -0.85
USP6NL-203ENST00000443016 TXKP42681 527 aa9.77□□□□□ -0.85
USP6NL-203ENST00000443016 CTTNQ14247 550 aaKnown RBP9.77□□□□□ -0.85
USP6NL-203ENST00000443016 XKR9Q5GH70 373 aa9.77□□□□□ -0.85
USP6NL-203ENST00000443016 TWF2Q6IBS0 349 aaKnown RBP9.77□□□□□ -0.85
USP6NL-203ENST00000443016 PTCRAQ6ISU1 281 aaPredicted RBP9.77□□□□□ -0.85
USP6NL-203ENST00000443016 CATSPER4Q7RTX7 472 aa9.77□□□□□ -0.85
USP6NL-203ENST00000443016 KSR1Q8IVT5 923 aa9.77□□□□□ -0.85
USP6NL-203ENST00000443016 POF1BQ8WVV4 589 aa9.77□□□□□ -0.85
USP6NL-203ENST00000443016 DYDC2Q96IM9 177 aa9.77□□□□□ -0.85
USP6NL-203ENST00000443016 C8orf76Q96K31 380 aa9.77□□□□□ -0.85
USP6NL-203ENST00000443016 TTC12Q9H892 705 aaPredicted RBP9.77□□□□□ -0.85
USP6NL-203ENST00000443016 IGKV6-21A0A0C4DH24 114 aa9.77□□□□□ -0.85
USP6NL-203ENST00000443016 STBD1O95210 358 aa9.77□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms