RNA–Protein interactions for RNA: ENST00000441915.5

SEMA3B-207, Transcript of semaphorin 3B, humanhuman

TSL 1 (best)

Gene SEMA3B, Length 2,710 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-207ENST00000441915 TNFAIP3P21580 790 aa17.89■□□□□ 0.45
SEMA3B-207ENST00000441915 ZNF131P52739 623 aa17.89■□□□□ 0.45
SEMA3B-207ENST00000441915 PPP2R5EQ16537 467 aa17.89■□□□□ 0.45
SEMA3B-207ENST00000441915 DACT2Q5SW24 774 aa17.89■□□□□ 0.45
SEMA3B-207ENST00000441915 ODR4Q5SWX8 454 aa17.89■□□□□ 0.45
SEMA3B-207ENST00000441915 TMC3Q7Z5M5 1100 aa17.89■□□□□ 0.45
SEMA3B-207ENST00000441915 MASTLQ96GX5 879 aa17.89■□□□□ 0.45
SEMA3B-207ENST00000441915 RAB17Q9H0T7 212 aa17.89■□□□□ 0.45
SEMA3B-207ENST00000441915 CARD9Q9H257 536 aa17.89■□□□□ 0.45
SEMA3B-207ENST00000441915 SEPT11Q9NVA2 429 aaKnown RBP17.89■□□□□ 0.45
SEMA3B-207ENST00000441915 KCND2Q9NZV8 630 aa17.89■□□□□ 0.45
SEMA3B-207ENST00000441915 BCCIPQ9P287 314 aaKnown RBP eCLIP17.89■□□□□ 0.45
SEMA3B-207ENST00000441915 SERPINA10Q9UK55 444 aa17.89■□□□□ 0.45
SEMA3B-207ENST00000441915 ODF2LQ9ULJ1 636 aa17.89■□□□□ 0.45
SEMA3B-207ENST00000441915 NRXN2Q9P2S2 1712 aa17.89■□□□□ 0.45
SEMA3B-207ENST00000441915 SPATA31A6Q5VVP1 1343 aa17.89■□□□□ 0.45
SEMA3B-207ENST00000441915 A0A1W2PRG0 241 aa17.89■□□□□ 0.45
SEMA3B-207ENST00000441915 UBAP1LF5GYI3 381 aa17.89■□□□□ 0.45
SEMA3B-207ENST00000441915 TRIM49P0CI25 452 aa17.89■□□□□ 0.45
SEMA3B-207ENST00000441915 TRIM49CP0CI26 452 aa17.89■□□□□ 0.45
SEMA3B-207ENST00000441915 MUTP22033 750 aa17.89■□□□□ 0.45
SEMA3B-207ENST00000441915 NLGN1Q8N2Q7 840 aa17.89■□□□□ 0.45
SEMA3B-207ENST00000441915 SLC5A5Q92911 643 aa17.89■□□□□ 0.45
SEMA3B-207ENST00000441915 GPR88Q9GZN0 384 aa17.89■□□□□ 0.45
SEMA3B-207ENST00000441915 INTS2Q9H0H0 1204 aaKnown RBP17.89■□□□□ 0.45
SEMA3B-207ENST00000441915 DPH5Q9H2P9 285 aa17.89■□□□□ 0.45
SEMA3B-207ENST00000441915 DMAC2Q9NW81 257 aa17.89■□□□□ 0.45
SEMA3B-207ENST00000441915 MYO1FO00160 1098 aa17.88■□□□□ 0.45
SEMA3B-207ENST00000441915 JAG1P78504 1218 aa17.88■□□□□ 0.45
SEMA3B-207ENST00000441915 MYL7Q01449 175 aa17.88■□□□□ 0.45
SEMA3B-207ENST00000441915 DHX9Q08211 1270 aaKnown RBP17.88■□□□□ 0.45
SEMA3B-207ENST00000441915 PLS1Q14651 629 aa17.88■□□□□ 0.45
SEMA3B-207ENST00000441915 SYT11Q9BT88 431 aa17.88■□□□□ 0.45
SEMA3B-207ENST00000441915 PPANQ9NQ55 473 aaKnown RBP17.88■□□□□ 0.45
SEMA3B-207ENST00000441915 DAAM1Q9Y4D1 1078 aa17.88■□□□□ 0.45
SEMA3B-207ENST00000441915 SMCHD1A6NHR9 2005 aa17.88■□□□□ 0.45
SEMA3B-207ENST00000441915 GOLGA6L10A0A0M3HER8 536 aa17.88■□□□□ 0.45
SEMA3B-207ENST00000441915 ANKRD62A6NC57 917 aa17.88■□□□□ 0.45
SEMA3B-207ENST00000441915 DDX3YO15523 660 aaKnown RBP17.88■□□□□ 0.45
SEMA3B-207ENST00000441915 POLR2MP0CAP2 368 aa17.88■□□□□ 0.45
SEMA3B-207ENST00000441915 POU5F1Q01860 360 aaKnown RBP17.88■□□□□ 0.45
SEMA3B-207ENST00000441915 ARHGAP44Q17R89 818 aa17.88■□□□□ 0.45
SEMA3B-207ENST00000441915 YTHDF3Q7Z739 585 aaKnown RBP17.88■□□□□ 0.45
SEMA3B-207ENST00000441915 IGSF9BQ9UPX0 1349 aa17.87■□□□□ 0.45
SEMA3B-207ENST00000441915 CLGNO14967 610 aa17.87■□□□□ 0.45
SEMA3B-207ENST00000441915 EXOC3O60645 756 aa17.87■□□□□ 0.45
SEMA3B-207ENST00000441915 PTENP60484 403 aa17.87■□□□□ 0.45
SEMA3B-207ENST00000441915 BFSP1Q12934 665 aa17.87■□□□□ 0.45
SEMA3B-207ENST00000441915 AGBL2Q5U5Z8 902 aa17.87■□□□□ 0.45
SEMA3B-207ENST00000441915 SYCP3Q8IZU3 236 aa17.87■□□□□ 0.45
SEMA3B-207ENST00000441915 FMO2Q99518 471 aa17.87■□□□□ 0.45
SEMA3B-207ENST00000441915 TDRD3Q9H7E2 651 aaKnown RBP17.87■□□□□ 0.45
SEMA3B-207ENST00000441915 SLC12A6Q9UHW9 1150 aa17.87■□□□□ 0.45
SEMA3B-207ENST00000441915 SYNPO2Q9UMS6 1093 aa17.87■□□□□ 0.45
SEMA3B-207ENST00000441915 RFX1P22670 979 aa17.87■□□□□ 0.45
SEMA3B-207ENST00000441915 CLUL1Q15846 466 aa17.87■□□□□ 0.45
SEMA3B-207ENST00000441915 CEP55Q53EZ4 464 aa17.87■□□□□ 0.45
SEMA3B-207ENST00000441915 MEX3CQ5U5Q3 659 aaKnown RBP17.87■□□□□ 0.45
SEMA3B-207ENST00000441915 DCAF12L1Q5VU92 463 aa17.87■□□□□ 0.45
SEMA3B-207ENST00000441915 CSRNP1Q96S65 589 aa17.87■□□□□ 0.45
SEMA3B-207ENST00000441915 WDR11Q9BZH6 1224 aa17.87■□□□□ 0.45
SEMA3B-207ENST00000441915 TRIM31Q9BZY9 425 aa17.87■□□□□ 0.45
SEMA3B-207ENST00000441915 THAP2Q9H0W7 228 aa17.87■□□□□ 0.45
SEMA3B-207ENST00000441915 ECE2O60344 883 aa17.86■□□□□ 0.45
SEMA3B-207ENST00000441915 ENTPD3O75355 529 aa17.86■□□□□ 0.45
SEMA3B-207ENST00000441915 BCRP11274 1271 aa17.86■□□□□ 0.45
SEMA3B-207ENST00000441915 KCTD19Q17RG1 926 aaPredicted RBP17.86■□□□□ 0.45
SEMA3B-207ENST00000441915 RDH13Q8NBN7 331 aa17.86■□□□□ 0.45
SEMA3B-207ENST00000441915 ZNF622Q969S3 477 aaKnown RBP eCLIP17.86■□□□□ 0.45
SEMA3B-207ENST00000441915 ARHGEF26Q96DR7 871 aa17.86■□□□□ 0.45
SEMA3B-207ENST00000441915 ZNF577Q9BSK1 485 aa17.86■□□□□ 0.45
SEMA3B-207ENST00000441915 EHMT1Q9H9B1 1298 aa17.86■□□□□ 0.45
SEMA3B-207ENST00000441915 NR2E1Q9Y466 385 aa17.86■□□□□ 0.45
SEMA3B-207ENST00000441915 ATRNL1Q5VV63 1379 aa17.86■□□□□ 0.45
SEMA3B-207ENST00000441915 PPP2R2AP63151 447 aa17.86■□□□□ 0.45
SEMA3B-207ENST00000441915 UBXN2AP68543 259 aa17.86■□□□□ 0.45
SEMA3B-207ENST00000441915 DR1Q01658 176 aa17.86■□□□□ 0.45
SEMA3B-207ENST00000441915 PHLDB3Q6NSJ2 640 aa17.86■□□□□ 0.45
SEMA3B-207ENST00000441915 MMS22LQ6ZRQ5 1243 aa17.86■□□□□ 0.45
SEMA3B-207ENST00000441915 RHOT2Q8IXI1 618 aa17.86■□□□□ 0.45
SEMA3B-207ENST00000441915 KAT2BQ92831 832 aa17.86■□□□□ 0.45
SEMA3B-207ENST00000441915 TRIM51Q9BSJ1 452 aa17.86■□□□□ 0.45
SEMA3B-207ENST00000441915 ARHGEF10LQ9HCE6 1279 aa17.86■□□□□ 0.45
SEMA3B-207ENST00000441915 NOVA2Q9UNW9 492 aaKnown RBP17.86■□□□□ 0.45
SEMA3B-207ENST00000441915 LRRN2O75325 713 aa17.85■□□□□ 0.45
SEMA3B-207ENST00000441915 ECE1P42892 770 aa17.85■□□□□ 0.45
SEMA3B-207ENST00000441915 IFFO1Q0D2I5 559 aa17.85■□□□□ 0.45
SEMA3B-207ENST00000441915 KRT71Q3SY84 523 aa17.85■□□□□ 0.45
SEMA3B-207ENST00000441915 SLC9A9Q8IVB4 645 aa17.85■□□□□ 0.45
SEMA3B-207ENST00000441915 HOOK2Q96ED9 719 aa17.85■□□□□ 0.45
SEMA3B-207ENST00000441915 TAS2R14Q9NYV8 317 aa17.85■□□□□ 0.45
SEMA3B-207ENST00000441915 WRAP73Q9P2S5 460 aaPredicted RBP17.85■□□□□ 0.45
SEMA3B-207ENST00000441915 GGA2Q9UJY4 613 aa17.85■□□□□ 0.45
SEMA3B-207ENST00000441915 GMNCA6NCL1 334 aa17.85■□□□□ 0.45
SEMA3B-207ENST00000441915 H0YHG0 523 aa17.85■□□□□ 0.45
SEMA3B-207ENST00000441915 FOXN3O00409 490 aaPredicted RBP17.85■□□□□ 0.45
SEMA3B-207ENST00000441915 KRT13P13646 458 aa17.85■□□□□ 0.45
SEMA3B-207ENST00000441915 CETN1Q12798 172 aa17.85■□□□□ 0.45
SEMA3B-207ENST00000441915 RRP1BQ14684 758 aaKnown RBP17.85■□□□□ 0.45
SEMA3B-207ENST00000441915 KIF22Q14807 665 aa17.85■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms