RNA–Protein interactions for RNA: ENST00000441821.5

SYN3-204, Transcript of synapsin III, humanhuman

TSL 1 (best)

Gene SYN3, Length 855 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYN3-204ENST00000441821 PTPN14Q15678 1187 aa11.33□□□□□ -0.6
SYN3-204ENST00000441821 TMTC3Q6ZXV5 915 aa11.33□□□□□ -0.6
SYN3-204ENST00000441821 FANCBQ8NB91 859 aa11.33□□□□□ -0.6
SYN3-204ENST00000441821 RIN2Q8WYP3 895 aaPredicted RBP11.33□□□□□ -0.6
SYN3-204ENST00000441821 NXPE3Q969Y0 559 aa11.33□□□□□ -0.6
SYN3-204ENST00000441821 PGBD1Q96JS3 809 aa11.33□□□□□ -0.6
SYN3-204ENST00000441821 TMEM87BQ96K49 555 aa11.33□□□□□ -0.6
SYN3-204ENST00000441821 CNTNAP3BQ96NU0 1288 aa11.33□□□□□ -0.6
SYN3-204ENST00000441821 HINFPQ9BQA5 517 aa11.33□□□□□ -0.6
SYN3-204ENST00000441821 EMILIN2Q9BXX0 1053 aa11.33□□□□□ -0.6
SYN3-204ENST00000441821 CNTNAP3Q9BZ76 1288 aa11.33□□□□□ -0.6
SYN3-204ENST00000441821 STK39Q9UEW8 545 aa11.33□□□□□ -0.6
SYN3-204ENST00000441821 SPDYE4A6NLX3 237 aa11.32□□□□□ -0.6
SYN3-204ENST00000441821 FAM86B1E9PN63 330 aa11.32□□□□□ -0.6
SYN3-204ENST00000441821 IPO5O00410 1097 aaKnown RBP11.32□□□□□ -0.6
SYN3-204ENST00000441821 SH2B2O14492 632 aaPredicted RBP11.32□□□□□ -0.6
SYN3-204ENST00000441821 PRC1O43663 620 aa11.32□□□□□ -0.6
SYN3-204ENST00000441821 N4BP1O75113 896 aaKnown RBP11.32□□□□□ -0.6
SYN3-204ENST00000441821 FAM86B2P0C5J1 330 aa11.32□□□□□ -0.6
SYN3-204ENST00000441821 SP9P0CG40 484 aa11.32□□□□□ -0.6
SYN3-204ENST00000441821 RXRAP19793 462 aa11.32□□□□□ -0.6
SYN3-204ENST00000441821 KLRC2P26717 231 aa11.32□□□□□ -0.6
SYN3-204ENST00000441821 MCM5P33992 734 aa11.32□□□□□ -0.6
SYN3-204ENST00000441821 PHKA2P46019 1235 aa11.32□□□□□ -0.6
SYN3-204ENST00000441821 GPC3P51654 580 aa11.32□□□□□ -0.6
SYN3-204ENST00000441821 AP3B2Q13367 1082 aa11.32□□□□□ -0.6
SYN3-204ENST00000441821 WWC2Q6AWC2 1192 aa11.32□□□□□ -0.6
SYN3-204ENST00000441821 PHLDB3Q6NSJ2 640 aa11.32□□□□□ -0.6
SYN3-204ENST00000441821 TYW1BQ6NUM6 668 aa11.32□□□□□ -0.6
SYN3-204ENST00000441821 ZNF746Q6NUN9 644 aaPredicted RBP11.32□□□□□ -0.6
SYN3-204ENST00000441821 PPP1R18Q6NYC8 613 aa11.32□□□□□ -0.6
SYN3-204ENST00000441821 CYP26C1Q6V0L0 522 aa11.32□□□□□ -0.6
SYN3-204ENST00000441821 TRMT1LQ7Z2T5 733 aaKnown RBP11.32□□□□□ -0.6
SYN3-204ENST00000441821 PLA2G4DQ86XP0 818 aa11.32□□□□□ -0.6
SYN3-204ENST00000441821 SMAP1Q8IYB5 467 aaPredicted RBP11.32□□□□□ -0.6
SYN3-204ENST00000441821 CMASQ8NFW8 434 aaPredicted RBP11.32□□□□□ -0.6
SYN3-204ENST00000441821 BCL7CQ8WUZ0 217 aaPredicted RBP11.32□□□□□ -0.6
SYN3-204ENST00000441821 MAP4K1Q92918 833 aa11.32□□□□□ -0.6
SYN3-204ENST00000441821 FAM167AQ96KS9 214 aa11.32□□□□□ -0.6
SYN3-204ENST00000441821 KLHL5Q96PQ7 755 aa11.32□□□□□ -0.6
SYN3-204ENST00000441821 TRAIPQ9BWF2 469 aa11.32□□□□□ -0.6
SYN3-204ENST00000441821 RHOBTB2Q9BYZ6 727 aa11.32□□□□□ -0.6
SYN3-204ENST00000441821 NRDE2Q9H7Z3 1164 aa11.32□□□□□ -0.6
SYN3-204ENST00000441821 TBC1D17Q9HA65 648 aa11.32□□□□□ -0.6
SYN3-204ENST00000441821 CHST12Q9NRB3 414 aa11.32□□□□□ -0.6
SYN3-204ENST00000441821 TBC1D22BQ9NU19 505 aa11.32□□□□□ -0.6
SYN3-204ENST00000441821 DLGAP2Q9P1A6 1054 aa11.32□□□□□ -0.6
SYN3-204ENST00000441821 PCDHA10Q9Y5I2 948 aa11.32□□□□□ -0.6
SYN3-204ENST00000441821 CFAP47Q6ZTR5 3102 aa11.32□□□□□ -0.6
SYN3-204ENST00000441821 IGLV3-22A0A075B6J6 115 aa11.31□□□□□ -0.6
SYN3-204ENST00000441821 LILRB3O75022 631 aa11.31□□□□□ -0.6
SYN3-204ENST00000441821 IGHDP01880 384 aa11.31□□□□□ -0.6
SYN3-204ENST00000441821 PSAPP07602 524 aa11.31□□□□□ -0.6
SYN3-204ENST00000441821 CNPP09543 421 aaKnown RBP11.31□□□□□ -0.6
SYN3-204ENST00000441821 SRFP11831 508 aa11.31□□□□□ -0.6
SYN3-204ENST00000441821 SKIP12755 728 aa11.31□□□□□ -0.6
SYN3-204ENST00000441821 FGFR4P22455 802 aa11.31□□□□□ -0.6
SYN3-204ENST00000441821 CLK2P49760 499 aaKnown RBP11.31□□□□□ -0.6
SYN3-204ENST00000441821 ADCY7P51828 1080 aa11.31□□□□□ -0.6
SYN3-204ENST00000441821 NAPAP54920 295 aa11.31□□□□□ -0.6
SYN3-204ENST00000441821 RSPO4Q2I0M5 234 aaPredicted RBP11.31□□□□□ -0.6
SYN3-204ENST00000441821 C1orf210Q8IVY1 113 aa11.31□□□□□ -0.6
SYN3-204ENST00000441821 SLC44A3Q8N4M1 653 aa11.31□□□□□ -0.6
SYN3-204ENST00000441821 LRRC71Q8N4P6 559 aa11.31□□□□□ -0.6
SYN3-204ENST00000441821 DCLK2Q8N568 766 aa11.31□□□□□ -0.6
SYN3-204ENST00000441821 RSAD2Q8WXG1 361 aa11.31□□□□□ -0.6
SYN3-204ENST00000441821 STAMQ92783 540 aa11.31□□□□□ -0.6
SYN3-204ENST00000441821 BORCS6Q96GS4 357 aa11.31□□□□□ -0.6
SYN3-204ENST00000441821 VN1R3Q9BXE9 311 aa11.31□□□□□ -0.6
SYN3-204ENST00000441821 GLT8D2Q9H1C3 349 aa11.31□□□□□ -0.6
SYN3-204ENST00000441821 WDR6Q9NNW5 1121 aaKnown RBP11.31□□□□□ -0.6
SYN3-204ENST00000441821 TBC1D13Q9NVG8 400 aa11.31□□□□□ -0.6
SYN3-204ENST00000441821 EPS15L1Q9UBC2 864 aa11.31□□□□□ -0.6
SYN3-204ENST00000441821 GABBR1Q9UBS5 961 aa11.31□□□□□ -0.6
SYN3-204ENST00000441821 CA14Q9ULX7 337 aa11.31□□□□□ -0.6
SYN3-204ENST00000441821 SIT1Q9Y3P8 196 aa11.31□□□□□ -0.6
SYN3-204ENST00000441821 GTF3C3Q9Y5Q9 886 aa11.31□□□□□ -0.6
SYN3-204ENST00000441821 SLC12A7Q9Y666 1083 aa11.31□□□□□ -0.6
SYN3-204ENST00000441821 EPG5Q9HCE0 2579 aa11.31□□□□□ -0.6
SYN3-204ENST00000441821 NCOR2Q9Y618 2525 aa11.31□□□□□ -0.6
SYN3-204ENST00000441821 C2orf16Q68DN1 1984 aa11.3□□□□□ -0.6
SYN3-204ENST00000441821 OFD1O75665 1012 aa11.3□□□□□ -0.6
SYN3-204ENST00000441821 DCNP07585 359 aaKnown RBP11.3□□□□□ -0.6
SYN3-204ENST00000441821 CYP3A4P08684 503 aa11.3□□□□□ -0.6
SYN3-204ENST00000441821 GSPT1P15170 499 aaKnown RBP11.3□□□□□ -0.6
SYN3-204ENST00000441821 SDHBP21912 280 aa11.3□□□□□ -0.6
SYN3-204ENST00000441821 CHMLP26374 656 aa11.3□□□□□ -0.6
SYN3-204ENST00000441821 GBP2P32456 591 aaPredicted RBP11.3□□□□□ -0.6
SYN3-204ENST00000441821 SLC11A1P49279 550 aa11.3□□□□□ -0.6
SYN3-204ENST00000441821 CDC42EP1Q00587 391 aa11.3□□□□□ -0.6
SYN3-204ENST00000441821 NOMO2Q5JPE7 1267 aa11.3□□□□□ -0.6
SYN3-204ENST00000441821 SPECC1Q5M775 1068 aa11.3□□□□□ -0.6
SYN3-204ENST00000441821 GLB1LQ6UWU2 654 aa11.3□□□□□ -0.6
SYN3-204ENST00000441821 SUMF1Q8NBK3 374 aa11.3□□□□□ -0.6
SYN3-204ENST00000441821 NLRP7Q8WX94 980 aa11.3□□□□□ -0.6
SYN3-204ENST00000441821 CRYGNQ8WXF5 182 aa11.3□□□□□ -0.6
SYN3-204ENST00000441821 ZNF668Q96K58 619 aaPredicted RBP11.3□□□□□ -0.6
SYN3-204ENST00000441821 SCLT1Q96NL6 688 aa11.3□□□□□ -0.6
SYN3-204ENST00000441821 ZNF577Q9BSK1 485 aa11.3□□□□□ -0.6
SYN3-204ENST00000441821 NRBP2Q9NSY0 501 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms