RNA–Protein interactions for RNA: ENST00000441602.5

VPS50-205, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 1 (best)

Gene VPS50, Length 3,474 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-205ENST00000441602 TGFB1I1O43294 461 aa6.58□□□□□ -1.36
VPS50-205ENST00000441602 FARP2O94887 1054 aaPredicted RBP6.58□□□□□ -1.36
VPS50-205ENST00000441602 SERPING1P05155 500 aa6.58□□□□□ -1.36
VPS50-205ENST00000441602 GARTP22102 1010 aa6.58□□□□□ -1.36
VPS50-205ENST00000441602 HNRNPH3P31942 346 aaKnown RBP6.58□□□□□ -1.36
VPS50-205ENST00000441602 NAMPTP43490 491 aa6.58□□□□□ -1.36
VPS50-205ENST00000441602 NPTX2P47972 431 aa6.58□□□□□ -1.36
VPS50-205ENST00000441602 LIG4P49917 911 aa6.58□□□□□ -1.36
VPS50-205ENST00000441602 POLR2FP61218 127 aaKnown RBP6.58□□□□□ -1.36
VPS50-205ENST00000441602 KIF5AQ12840 1032 aa6.58□□□□□ -1.36
VPS50-205ENST00000441602 FAM110CQ1W6H9 321 aa6.58□□□□□ -1.36
VPS50-205ENST00000441602 IER5Q5VY09 327 aa6.58□□□□□ -1.36
VPS50-205ENST00000441602 RAD9BQ6WBX8 426 aa6.58□□□□□ -1.36
VPS50-205ENST00000441602 SYT10Q6XYQ8 523 aa6.58□□□□□ -1.36
VPS50-205ENST00000441602 ANO5Q75V66 913 aa6.58□□□□□ -1.36
VPS50-205ENST00000441602 PLPPR4Q7Z2D5 763 aa6.58□□□□□ -1.36
VPS50-205ENST00000441602 MAP4K3Q8IVH8 894 aa6.58□□□□□ -1.36
VPS50-205ENST00000441602 DAW1Q8N136 415 aa6.58□□□□□ -1.36
VPS50-205ENST00000441602 MSL3Q8N5Y2 521 aaKnown RBP6.58□□□□□ -1.36
VPS50-205ENST00000441602 MNS1Q8NEH6 495 aa6.58□□□□□ -1.36
VPS50-205ENST00000441602 BRI3BPQ8WY22 251 aa6.58□□□□□ -1.36
VPS50-205ENST00000441602 SPATA33Q96N06 139 aa6.58□□□□□ -1.36
VPS50-205ENST00000441602 DMAC2Q9NW81 257 aa6.58□□□□□ -1.36
VPS50-205ENST00000441602 DDX41Q9UJV9 622 aaKnown RBP6.58□□□□□ -1.36
VPS50-205ENST00000441602 TBX20Q9UMR3 447 aa6.58□□□□□ -1.36
VPS50-205ENST00000441602 SYNGAP1Q96PV0 1343 aa6.58□□□□□ -1.36
VPS50-205ENST00000441602 USP27XA6NNY8 438 aa6.57□□□□□ -1.36
VPS50-205ENST00000441602 ZNF862O60290 1169 aa6.57□□□□□ -1.36
VPS50-205ENST00000441602 HBP1O60381 514 aa6.57□□□□□ -1.36
VPS50-205ENST00000441602 AKAP3O75969 853 aa6.57□□□□□ -1.36
VPS50-205ENST00000441602 LDHAP00338 332 aaKnown RBP6.57□□□□□ -1.36
VPS50-205ENST00000441602 PGK2P07205 417 aa6.57□□□□□ -1.36
VPS50-205ENST00000441602 CYP2C8P10632 490 aa6.57□□□□□ -1.36
VPS50-205ENST00000441602 FERP16591 822 aa6.57□□□□□ -1.36
VPS50-205ENST00000441602 TCF7P36402 384 aaPredicted RBP6.57□□□□□ -1.36
VPS50-205ENST00000441602 STAT1P42224 750 aa6.57□□□□□ -1.36
VPS50-205ENST00000441602 EFNA5P52803 228 aa6.57□□□□□ -1.36
VPS50-205ENST00000441602 TOGARAM2Q6ZUX3 1019 aa6.57□□□□□ -1.36
VPS50-205ENST00000441602 EEPD1Q7L9B9 569 aa6.57□□□□□ -1.36
VPS50-205ENST00000441602 REXO1L1PQ8IX06 675 aa6.57□□□□□ -1.36
VPS50-205ENST00000441602 ANKRD13CQ8N6S4 541 aa6.57□□□□□ -1.36
VPS50-205ENST00000441602 ATP8B4Q8TF62 1192 aa6.57□□□□□ -1.36
VPS50-205ENST00000441602 JAKMIP2Q96AA8 810 aa6.57□□□□□ -1.36
VPS50-205ENST00000441602 NTPCRQ9BSD7 190 aaKnown RBP6.57□□□□□ -1.36
VPS50-205ENST00000441602 STRA6Q9BX79 667 aa6.57□□□□□ -1.36
VPS50-205ENST00000441602 TTYH3Q9C0H2 523 aa6.57□□□□□ -1.36
VPS50-205ENST00000441602 EFCC1Q9HA90 598 aa6.57□□□□□ -1.36
VPS50-205ENST00000441602 TXNRD2Q9NNW7 524 aa6.57□□□□□ -1.36
VPS50-205ENST00000441602 ZNF215Q9UL58 517 aaPredicted RBP6.57□□□□□ -1.36
VPS50-205ENST00000441602 PLAGL2Q9UPG8 496 aa6.57□□□□□ -1.36
VPS50-205ENST00000441602 TRPC6Q9Y210 931 aa6.57□□□□□ -1.36
VPS50-205ENST00000441602 EMSYQ7Z589 1322 aa6.57□□□□□ -1.36
VPS50-205ENST00000441602 PTPRFP10586 1907 aa6.57□□□□□ -1.36
VPS50-205ENST00000441602 IGKV6D-21A0A0A0MT36 114 aa6.57□□□□□ -1.36
VPS50-205ENST00000441602 LRRIQ4A6NIV6 560 aa6.57□□□□□ -1.36
VPS50-205ENST00000441602 ASAP2O43150 1006 aa6.57□□□□□ -1.36
VPS50-205ENST00000441602 SORBS3O60504 671 aa6.57□□□□□ -1.36
VPS50-205ENST00000441602 MATR3P43243 847 aaKnown RBP eCLIP6.57□□□□□ -1.36
VPS50-205ENST00000441602 BFSP1Q12934 665 aa6.57□□□□□ -1.36
VPS50-205ENST00000441602 Q3C1V9 767 aa6.57□□□□□ -1.36
VPS50-205ENST00000441602 BRDTQ58F21 947 aaPredicted RBP6.57□□□□□ -1.36
VPS50-205ENST00000441602 ARMCX2Q7L311 632 aa6.57□□□□□ -1.36
VPS50-205ENST00000441602 TMEM174Q8WUU8 243 aa6.57□□□□□ -1.36
VPS50-205ENST00000441602 POMGNT1Q8WZA1 660 aa6.57□□□□□ -1.36
VPS50-205ENST00000441602 DESI2Q9BSY9 194 aa6.57□□□□□ -1.36
VPS50-205ENST00000441602 POLD4Q9HCU8 107 aa6.57□□□□□ -1.36
VPS50-205ENST00000441602 HSPBP1Q9NZL4 362 aa6.57□□□□□ -1.36
VPS50-205ENST00000441602 GCNT4Q9P109 453 aa6.57□□□□□ -1.36
VPS50-205ENST00000441602 FBXL5Q9UKA1 691 aa6.57□□□□□ -1.36
VPS50-205ENST00000441602 GSTTP1A0A1W2PQM5 241 aa6.57□□□□□ -1.36
VPS50-205ENST00000441602 HNRNPDLO14979 420 aaKnown RBP6.57□□□□□ -1.36
VPS50-205ENST00000441602 LGR5O75473 907 aa6.57□□□□□ -1.36
VPS50-205ENST00000441602 GFPT2O94808 682 aa6.57□□□□□ -1.36
VPS50-205ENST00000441602 ADORA2AP29274 412 aa6.57□□□□□ -1.36
VPS50-205ENST00000441602 FMO5P49326 533 aa6.57□□□□□ -1.36
VPS50-205ENST00000441602 ZNF157P51786 506 aaPredicted RBP6.57□□□□□ -1.36
VPS50-205ENST00000441602 VAMP7P51809 220 aa6.57□□□□□ -1.36
VPS50-205ENST00000441602 TUBB4BP68371 445 aa6.57□□□□□ -1.36
VPS50-205ENST00000441602 KLHL30Q0D2K2 578 aa6.57□□□□□ -1.36
VPS50-205ENST00000441602 SREBF2Q12772 1141 aa6.57□□□□□ -1.36
VPS50-205ENST00000441602 MKRN3Q13064 507 aaKnown RBP6.57□□□□□ -1.36
VPS50-205ENST00000441602 IRF5Q13568 498 aa6.57□□□□□ -1.36
VPS50-205ENST00000441602 MXD4Q14582 209 aaPredicted RBP6.57□□□□□ -1.36
VPS50-205ENST00000441602 IFI16Q16666 785 aaKnown RBP6.57□□□□□ -1.36
VPS50-205ENST00000441602 ZNF484Q5JVG2 852 aa6.57□□□□□ -1.36
VPS50-205ENST00000441602 C10orf76Q5T2E6 689 aa6.57□□□□□ -1.36
VPS50-205ENST00000441602 ILDR2Q71H61 639 aa6.57□□□□□ -1.36
VPS50-205ENST00000441602 TMC2Q8TDI7 906 aa6.57□□□□□ -1.36
VPS50-205ENST00000441602 PSPC1Q8WXF1 523 aaKnown RBP6.57□□□□□ -1.36
VPS50-205ENST00000441602 SLC35C1Q96A29 364 aa6.57□□□□□ -1.36
VPS50-205ENST00000441602 MS4A4AQ96JQ5 239 aa6.57□□□□□ -1.36
VPS50-205ENST00000441602 ALS2CR12Q96Q35 445 aa6.57□□□□□ -1.36
VPS50-205ENST00000441602 FIZ1Q96SL8 496 aa6.57□□□□□ -1.36
VPS50-205ENST00000441602 NHEJ1Q9H9Q4 299 aaPredicted RBP6.57□□□□□ -1.36
VPS50-205ENST00000441602 NLRC4Q9NPP4 1024 aa6.57□□□□□ -1.36
VPS50-205ENST00000441602 ZMYM2Q9UBW7 1377 aa6.57□□□□□ -1.36
VPS50-205ENST00000441602 CTAGE9A4FU28 777 aa6.56□□□□□ -1.36
VPS50-205ENST00000441602 LRRC53A6NM62 1247 aa6.56□□□□□ -1.36
VPS50-205ENST00000441602 K7ERI5 159 aa6.56□□□□□ -1.36
VPS50-205ENST00000441602 MAGEB2O15479 319 aa6.56□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms