RNA–Protein interactions for RNA: ENST00000441580.5

CPSF4-206, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2 BASIC

Gene CPSF4, Length 942 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-206ENST00000441580 SLC35F6Q8N357 371 aa14.39□□□□□ -0.11
CPSF4-206ENST00000441580 XXYLT1Q8NBI6 393 aa14.39□□□□□ -0.11
CPSF4-206ENST00000441580 AFAP1L1Q8TED9 768 aa14.39□□□□□ -0.11
CPSF4-206ENST00000441580 ANKRD7Q92527 254 aa14.39□□□□□ -0.11
CPSF4-206ENST00000441580 VTI1AQ96AJ9 217 aa14.39□□□□□ -0.11
CPSF4-206ENST00000441580 BCAS3Q9H6U6 928 aa14.39□□□□□ -0.11
CPSF4-206ENST00000441580 NLRC4Q9NPP4 1024 aa14.39□□□□□ -0.11
CPSF4-206ENST00000441580 KMT5AQ9NQR1 393 aa14.39□□□□□ -0.11
CPSF4-206ENST00000441580 AIPL1Q9NZN9 384 aa14.39□□□□□ -0.11
CPSF4-206ENST00000441580 MAFBQ9Y5Q3 323 aaPredicted RBP14.39□□□□□ -0.11
CPSF4-206ENST00000441580 BZW2Q9Y6E2 419 aaKnown RBP14.39□□□□□ -0.11
CPSF4-206ENST00000441580 DNAJC25-GNG10A0A024R161 153 aa14.38□□□□□ -0.11
CPSF4-206ENST00000441580 IGKV6D-21A0A0A0MT36 114 aa14.38□□□□□ -0.11
CPSF4-206ENST00000441580 ANO9A1A5B4 782 aa14.38□□□□□ -0.11
CPSF4-206ENST00000441580 TMEM150BA6NC51 233 aa14.38□□□□□ -0.11
CPSF4-206ENST00000441580 SLC16A4O15374 487 aa14.38□□□□□ -0.11
CPSF4-206ENST00000441580 CETPP11597 493 aa14.38□□□□□ -0.11
CPSF4-206ENST00000441580 UCHL3P15374 230 aa14.38□□□□□ -0.11
CPSF4-206ENST00000441580 PON1P27169 355 aa14.38□□□□□ -0.11
CPSF4-206ENST00000441580 EIF4A3P38919 411 aaKnown RBP14.38□□□□□ -0.11
CPSF4-206ENST00000441580 NPTX2P47972 431 aa14.38□□□□□ -0.11
CPSF4-206ENST00000441580 POLGP54098 1239 aaPredicted RBP14.38□□□□□ -0.11
CPSF4-206ENST00000441580 ERVK-9P63128 1117 aa14.38□□□□□ -0.11
CPSF4-206ENST00000441580 SP4Q02446 784 aa14.38□□□□□ -0.11
CPSF4-206ENST00000441580 CETN1Q12798 172 aa14.38□□□□□ -0.11
CPSF4-206ENST00000441580 CYFIP1Q7L576 1253 aa14.38□□□□□ -0.11
CPSF4-206ENST00000441580 TMEM161BQ8NDZ6 487 aa14.38□□□□□ -0.11
CPSF4-206ENST00000441580 MORC4Q8TE76 937 aa14.38□□□□□ -0.11
CPSF4-206ENST00000441580 CRACR2AQ9BSW2 395 aa14.38□□□□□ -0.11
CPSF4-206ENST00000441580 POLR3FQ9H1D9 316 aaPredicted RBP14.38□□□□□ -0.11
CPSF4-206ENST00000441580 POLD4Q9HCU8 107 aa14.38□□□□□ -0.11
CPSF4-206ENST00000441580 GPRC5CQ9NQ84 441 aa14.38□□□□□ -0.11
CPSF4-206ENST00000441580 HSPBP1Q9NZL4 362 aa14.38□□□□□ -0.11
CPSF4-206ENST00000441580 CCDC169A6NNP5 214 aa14.37□□□□□ -0.11
CPSF4-206ENST00000441580 EFCAB8A8MWE9 144 aa14.37□□□□□ -0.11
CPSF4-206ENST00000441580 KIAA0391O15091 583 aaKnown RBP14.37□□□□□ -0.11
CPSF4-206ENST00000441580 PMM2O15305 246 aa14.37□□□□□ -0.11
CPSF4-206ENST00000441580 GAS2O43903 313 aaKnown RBP14.37□□□□□ -0.11
CPSF4-206ENST00000441580 PRKCIP41743 596 aa14.37□□□□□ -0.11
CPSF4-206ENST00000441580 GTF2A2P52657 109 aa14.37□□□□□ -0.11
CPSF4-206ENST00000441580 WHAMMP3Q1A5X7 153 aa14.37□□□□□ -0.11
CPSF4-206ENST00000441580 HGSNATQ68CP4 663 aa14.37□□□□□ -0.11
CPSF4-206ENST00000441580 VPS36Q86VN1 386 aa14.37□□□□□ -0.11
CPSF4-206ENST00000441580 KSR1Q8IVT5 923 aa14.37□□□□□ -0.11
CPSF4-206ENST00000441580 CEP112Q8N8E3 955 aa14.37□□□□□ -0.11
CPSF4-206ENST00000441580 SECISBP2LQ93073 1101 aaKnown RBP14.37□□□□□ -0.11
CPSF4-206ENST00000441580 SLC10A4Q96EP9 437 aa14.37□□□□□ -0.11
CPSF4-206ENST00000441580 ALS2CR12Q96Q35 445 aa14.37□□□□□ -0.11
CPSF4-206ENST00000441580 NTPCRQ9BSD7 190 aaKnown RBP14.37□□□□□ -0.11
CPSF4-206ENST00000441580 XPNPEP1Q9NQW7 623 aa14.37□□□□□ -0.11
CPSF4-206ENST00000441580 PDLIM7Q9NR12 457 aa14.37□□□□□ -0.11
CPSF4-206ENST00000441580 RBPJLQ9UBG7 517 aa14.37□□□□□ -0.11
CPSF4-206ENST00000441580 TBX20Q9UMR3 447 aa14.37□□□□□ -0.11
CPSF4-206ENST00000441580 GUCA1BQ9UMX6 200 aa14.37□□□□□ -0.11
CPSF4-206ENST00000441580 FHOD1Q9Y613 1164 aa14.37□□□□□ -0.11
CPSF4-206ENST00000441580 EMSYQ7Z589 1322 aa14.37□□□□□ -0.11
CPSF4-206ENST00000441580 DENND3A2RUS2 1198 aa14.36□□□□□ -0.11
CPSF4-206ENST00000441580 ASB14A6NK59 587 aa14.36□□□□□ -0.11
CPSF4-206ENST00000441580 PJA2O43164 708 aa14.36□□□□□ -0.11
CPSF4-206ENST00000441580 TADA3O75528 432 aa14.36□□□□□ -0.11
CPSF4-206ENST00000441580 GFPT2O94808 682 aa14.36□□□□□ -0.11
CPSF4-206ENST00000441580 CCDC172P0C7W6 258 aa14.36□□□□□ -0.11
CPSF4-206ENST00000441580 FERP16591 822 aa14.36□□□□□ -0.11
CPSF4-206ENST00000441580 GJA5P36382 358 aa14.36□□□□□ -0.11
CPSF4-206ENST00000441580 GCLCP48506 637 aaPredicted RBP14.36□□□□□ -0.11
CPSF4-206ENST00000441580 JAM2P57087 298 aa14.36□□□□□ -0.11
CPSF4-206ENST00000441580 TUBB4BP68371 445 aa14.36□□□□□ -0.11
CPSF4-206ENST00000441580 KLHL30Q0D2K2 578 aa14.36□□□□□ -0.11
CPSF4-206ENST00000441580 ASTE1Q2TB18 679 aaPredicted RBP14.36□□□□□ -0.11
CPSF4-206ENST00000441580 MTERF2Q49AM1 385 aa14.36□□□□□ -0.11
CPSF4-206ENST00000441580 C10orf76Q5T2E6 689 aa14.36□□□□□ -0.11
CPSF4-206ENST00000441580 EXOC8Q8IYI6 725 aa14.36□□□□□ -0.11
CPSF4-206ENST00000441580 TRIM58Q8NG06 486 aa14.36□□□□□ -0.11
CPSF4-206ENST00000441580 SLC7A3Q8WY07 619 aa14.36□□□□□ -0.11
CPSF4-206ENST00000441580 NIFKQ9BYG3 293 aaKnown RBP14.36□□□□□ -0.11
CPSF4-206ENST00000441580 INTS2Q9H0H0 1204 aaKnown RBP14.36□□□□□ -0.11
CPSF4-206ENST00000441580 TXNRD2Q9NNW7 524 aa14.36□□□□□ -0.11
CPSF4-206ENST00000441580 SIX2Q9NPC8 291 aa14.36□□□□□ -0.11
CPSF4-206ENST00000441580 ARHGAP28Q9P2N2 729 aa14.36□□□□□ -0.11
CPSF4-206ENST00000441580 CDC23Q9UJX2 597 aa14.36□□□□□ -0.11
CPSF4-206ENST00000441580 CLEC11AQ9Y240 323 aa14.36□□□□□ -0.11
CPSF4-206ENST00000441580 PCDHA13Q9Y5I0 950 aa14.36□□□□□ -0.11
CPSF4-206ENST00000441580 PLXNA1Q9UIW2 1896 aa14.35□□□□□ -0.11
CPSF4-206ENST00000441580 A0A0U1RQJ8 604 aa14.35□□□□□ -0.11
CPSF4-206ENST00000441580 TLR2O60603 784 aa14.35□□□□□ -0.11
CPSF4-206ENST00000441580 TACC1O75410 805 aa14.35□□□□□ -0.11
CPSF4-206ENST00000441580 GGPS1O95749 300 aa14.35□□□□□ -0.11
CPSF4-206ENST00000441580 PLEKP08567 350 aaPredicted RBP14.35□□□□□ -0.11
CPSF4-206ENST00000441580 GARTP22102 1010 aa14.35□□□□□ -0.11
CPSF4-206ENST00000441580 NAMPTP43490 491 aa14.35□□□□□ -0.11
CPSF4-206ENST00000441580 VAMP7P51809 220 aa14.35□□□□□ -0.11
CPSF4-206ENST00000441580 MCCD1P59942 119 aaPredicted RBP14.35□□□□□ -0.11
CPSF4-206ENST00000441580 SP2Q02086 613 aa14.35□□□□□ -0.11
CPSF4-206ENST00000441580 SLC18A3Q16572 532 aa14.35□□□□□ -0.11
CPSF4-206ENST00000441580 DPY19L2P1Q6NXN4 242 aa14.35□□□□□ -0.11
CPSF4-206ENST00000441580 ANKRD23Q86SG2 305 aa14.35□□□□□ -0.11
CPSF4-206ENST00000441580 ATRIPQ8WXE1 791 aa14.35□□□□□ -0.11
CPSF4-206ENST00000441580 SEPT1Q8WYJ6 367 aa14.35□□□□□ -0.11
CPSF4-206ENST00000441580 BSNDQ8WZ55 320 aa14.35□□□□□ -0.11
CPSF4-206ENST00000441580 FGD4Q96M96 766 aa14.35□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms