RNA–Protein interactions for RNA: ENST00000441438.2

SYNE2-206, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best)

Gene SYNE2, Length 3,084 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-206ENST00000441438 EPM2AIP1Q7L775 607 aaPredicted RBP11.45□□□□□ -0.58
SYNE2-206ENST00000441438 PLEKHM2Q8IWE5 1019 aa11.45□□□□□ -0.58
SYNE2-206ENST00000441438 SUPT20HQ8NEM7 779 aa11.45□□□□□ -0.58
SYNE2-206ENST00000441438 NKX2-3Q8TAU0 364 aa11.45□□□□□ -0.58
SYNE2-206ENST00000441438 DENND1AQ8TEH3 1009 aa11.45□□□□□ -0.58
SYNE2-206ENST00000441438 SIL1Q9H173 461 aa11.45□□□□□ -0.58
SYNE2-206ENST00000441438 MROH8Q9H579 483 aa11.45□□□□□ -0.58
SYNE2-206ENST00000441438 H7C0S8 307 aa11.45□□□□□ -0.58
SYNE2-206ENST00000441438 TEX28O15482 410 aa11.45□□□□□ -0.58
SYNE2-206ENST00000441438 ZW10O43264 779 aa11.45□□□□□ -0.58
SYNE2-206ENST00000441438 ATP5BP06576 529 aaKnown RBP11.45□□□□□ -0.58
SYNE2-206ENST00000441438 RLBP1P12271 317 aa11.45□□□□□ -0.58
SYNE2-206ENST00000441438 HSPA6P17066 643 aa11.45□□□□□ -0.58
SYNE2-206ENST00000441438 MSNP26038 577 aaKnown RBP11.45□□□□□ -0.58
SYNE2-206ENST00000441438 GNA15P30679 374 aa11.45□□□□□ -0.58
SYNE2-206ENST00000441438 RANBP1P43487 201 aa11.45□□□□□ -0.58
SYNE2-206ENST00000441438 TMEM62Q0P6H9 643 aa11.45□□□□□ -0.58
SYNE2-206ENST00000441438 AIMP1Q12904 312 aaKnown RBP11.45□□□□□ -0.58
SYNE2-206ENST00000441438 Q4G0T1 1027 aa11.45□□□□□ -0.58
SYNE2-206ENST00000441438 C7orf31Q8N865 590 aa11.45□□□□□ -0.58
SYNE2-206ENST00000441438 NINJ1Q92982 152 aa11.45□□□□□ -0.58
SYNE2-206ENST00000441438 CMTM3Q96MX0 182 aa11.45□□□□□ -0.58
SYNE2-206ENST00000441438 PARVGQ9HBI0 331 aa11.45□□□□□ -0.58
SYNE2-206ENST00000441438 XAB2Q9HCS7 855 aaKnown RBP11.45□□□□□ -0.58
SYNE2-206ENST00000441438 FKBP14Q9NWM8 211 aa11.45□□□□□ -0.58
SYNE2-206ENST00000441438 POTEFA5A3E0 1075 aa11.44□□□□□ -0.58
SYNE2-206ENST00000441438 TBX18O95935 607 aa11.44□□□□□ -0.58
SYNE2-206ENST00000441438 CYP2A6P11509 494 aaPredicted RBP11.44□□□□□ -0.58
SYNE2-206ENST00000441438 ANXA13P27216 316 aa11.44□□□□□ -0.58
SYNE2-206ENST00000441438 GPR85P60893 370 aa11.44□□□□□ -0.58
SYNE2-206ENST00000441438 NAA25Q14CX7 972 aa11.44□□□□□ -0.58
SYNE2-206ENST00000441438 TUSC1Q2TAM9 212 aa11.44□□□□□ -0.58
SYNE2-206ENST00000441438 PPP1R21Q6ZMI0 780 aa11.44□□□□□ -0.58
SYNE2-206ENST00000441438 CCDC170Q8IYT3 715 aa11.44□□□□□ -0.58
SYNE2-206ENST00000441438 DHX58Q96C10 678 aa11.44□□□□□ -0.58
SYNE2-206ENST00000441438 ANAPC16Q96DE5 110 aa11.44□□□□□ -0.58
SYNE2-206ENST00000441438 VPS50Q96JG6 964 aa11.44□□□□□ -0.58
SYNE2-206ENST00000441438 UBXN10Q96LJ8 280 aa11.44□□□□□ -0.58
SYNE2-206ENST00000441438 DDX23Q9BUQ8 820 aaKnown RBP11.44□□□□□ -0.58
SYNE2-206ENST00000441438 CYP4F12Q9HCS2 524 aa11.44□□□□□ -0.58
SYNE2-206ENST00000441438 EME2A4GXA9 379 aaPredicted RBP11.44□□□□□ -0.58
SYNE2-206ENST00000441438 PDPK1O15530 556 aa11.44□□□□□ -0.58
SYNE2-206ENST00000441438 KCNH2Q12809 1159 aa11.44□□□□□ -0.58
SYNE2-206ENST00000441438 BYSLQ13895 437 aaKnown RBP11.44□□□□□ -0.58
SYNE2-206ENST00000441438 GALNT7Q86SF2 657 aa11.44□□□□□ -0.58
SYNE2-206ENST00000441438 SPATA24Q86W54 205 aa11.44□□□□□ -0.58
SYNE2-206ENST00000441438 B4GALNT2Q8NHY0 566 aa11.44□□□□□ -0.58
SYNE2-206ENST00000441438 THUMPD2Q9BTF0 503 aaKnown RBP11.44□□□□□ -0.58
SYNE2-206ENST00000441438 ZWILCHQ9H900 591 aa11.44□□□□□ -0.58
SYNE2-206ENST00000441438 XPO5Q9HAV4 1204 aaKnown RBP eCLIP11.44□□□□□ -0.58
SYNE2-206ENST00000441438 ATPIF1Q9UII2 106 aa11.44□□□□□ -0.58
SYNE2-206ENST00000441438 ALOX15P16050 662 aaPredicted RBP11.44□□□□□ -0.58
SYNE2-206ENST00000441438 TKTL1P51854 596 aa11.44□□□□□ -0.58
SYNE2-206ENST00000441438 TERF2Q15554 542 aa11.44□□□□□ -0.58
SYNE2-206ENST00000441438 CCDC57Q2TAC2 916 aa11.44□□□□□ -0.58
SYNE2-206ENST00000441438 CEP55Q53EZ4 464 aa11.44□□□□□ -0.58
SYNE2-206ENST00000441438 RBM20Q5T481 1227 aaKnown RBP11.44□□□□□ -0.58
SYNE2-206ENST00000441438 AADACL4Q5VUY2 407 aa11.44□□□□□ -0.58
SYNE2-206ENST00000441438 XKR5Q6UX68 686 aa11.44□□□□□ -0.58
SYNE2-206ENST00000441438 RNF10Q8N5U6 811 aaKnown RBP11.44□□□□□ -0.58
SYNE2-206ENST00000441438 TRIM5Q9C035 493 aa11.44□□□□□ -0.58
SYNE2-206ENST00000441438 PLSCR4Q9NRQ2 329 aa11.44□□□□□ -0.58
SYNE2-206ENST00000441438 PALMO75781 387 aa11.43□□□□□ -0.58
SYNE2-206ENST00000441438 HDCP19113 662 aa11.43□□□□□ -0.58
SYNE2-206ENST00000441438 ETV3P41162 512 aa11.43□□□□□ -0.58
SYNE2-206ENST00000441438 YARSP54577 528 aaKnown RBP11.43□□□□□ -0.58
SYNE2-206ENST00000441438 AK2P54819 239 aa11.43□□□□□ -0.58
SYNE2-206ENST00000441438 HS1BP3Q53T59 392 aa11.43□□□□□ -0.58
SYNE2-206ENST00000441438 USPL1Q5W0Q7 1092 aa11.43□□□□□ -0.58
SYNE2-206ENST00000441438 RNF135Q8IUD6 432 aa11.43□□□□□ -0.58
SYNE2-206ENST00000441438 CCDC33Q8N5R6 958 aa11.43□□□□□ -0.58
SYNE2-206ENST00000441438 ZBTB44Q8NCP5 570 aa11.43□□□□□ -0.58
SYNE2-206ENST00000441438 PRAM1Q96QH2 718 aa11.43□□□□□ -0.58
SYNE2-206ENST00000441438 CTAGE1Q96RT6 745 aa11.43□□□□□ -0.58
SYNE2-206ENST00000441438 ISCA1Q9BUE6 129 aa11.43□□□□□ -0.58
SYNE2-206ENST00000441438 GBP3Q9H0R5 595 aa11.43□□□□□ -0.58
SYNE2-206ENST00000441438 TRMT13Q9NUP7 481 aaKnown RBP11.43□□□□□ -0.58
SYNE2-206ENST00000441438 PNMA3Q9UL41 463 aa11.43□□□□□ -0.58
SYNE2-206ENST00000441438 TMEM221A6NGB7 291 aa11.43□□□□□ -0.58
SYNE2-206ENST00000441438 VWA5AO00534 786 aa11.43□□□□□ -0.58
SYNE2-206ENST00000441438 ALAS2P22557 587 aa11.43□□□□□ -0.58
SYNE2-206ENST00000441438 CDC25CP30307 473 aa11.43□□□□□ -0.58
SYNE2-206ENST00000441438 ZNF423Q2M1K9 1284 aa11.43□□□□□ -0.58
SYNE2-206ENST00000441438 PERM1Q5SV97 790 aa11.43□□□□□ -0.58
SYNE2-206ENST00000441438 CEP70Q8NHQ1 597 aa11.43□□□□□ -0.58
SYNE2-206ENST00000441438 NXPE3Q969Y0 559 aa11.43□□□□□ -0.58
SYNE2-206ENST00000441438 SDCCAG3Q96C92 435 aa11.43□□□□□ -0.58
SYNE2-206ENST00000441438 MAML3Q96JK9 1138 aa11.43□□□□□ -0.58
SYNE2-206ENST00000441438 ORAI2Q96SN7 254 aa11.43□□□□□ -0.58
SYNE2-206ENST00000441438 MYD88Q99836 296 aa11.43□□□□□ -0.58
SYNE2-206ENST00000441438 LIMCH1Q9UPQ0 1083 aa11.43□□□□□ -0.58
SYNE2-206ENST00000441438 CCDC169A6NNP5 214 aa11.42□□□□□ -0.58
SYNE2-206ENST00000441438 CAVIN2O95810 425 aa11.42□□□□□ -0.58
SYNE2-206ENST00000441438 CES1P23141 567 aa11.42□□□□□ -0.58
SYNE2-206ENST00000441438 RXRBP28702 533 aa11.42□□□□□ -0.58
SYNE2-206ENST00000441438 MCM5P33992 734 aa11.42□□□□□ -0.58
SYNE2-206ENST00000441438 IREB2P48200 963 aaKnown RBP11.42□□□□□ -0.58
SYNE2-206ENST00000441438 VPS41P49754 854 aa11.42□□□□□ -0.58
SYNE2-206ENST00000441438 MRPS5P82675 430 aaKnown RBP11.42□□□□□ -0.58
SYNE2-206ENST00000441438 SLC9A5Q14940 896 aa11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms