RNA–Protein interactions for RNA: ENST00000441368.5

SEC61A2-209, Transcript of Sec61 translocon alpha 2 subunit, humanhuman

TSL 5

Gene SEC61A2, Length 691 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A2-209ENST00000441368 COLGALT1Q8NBJ5 622 aa20.5■□□□□ 0.87
SEC61A2-209ENST00000441368 GADD45GIP1Q8TAE8 222 aaPredicted RBP20.5■□□□□ 0.87
SEC61A2-209ENST00000441368 SPPL3Q8TCT6 385 aa20.5■□□□□ 0.87
SEC61A2-209ENST00000441368 C8orf76Q96K31 380 aa20.5■□□□□ 0.87
SEC61A2-209ENST00000441368 TMEM117Q9H0C3 514 aa20.5■□□□□ 0.87
SEC61A2-209ENST00000441368 ZSWIM4Q9H7M6 989 aa20.5■□□□□ 0.87
SEC61A2-209ENST00000441368 WRAP73Q9P2S5 460 aaPredicted RBP20.5■□□□□ 0.87
SEC61A2-209ENST00000441368 IGKV6-21A0A0C4DH24 114 aa20.49■□□□□ 0.87
SEC61A2-209ENST00000441368 DNAJB1P25685 340 aa20.49■□□□□ 0.87
SEC61A2-209ENST00000441368 SSTR3P32745 418 aaPredicted RBP20.49■□□□□ 0.87
SEC61A2-209ENST00000441368 RFC5P40937 340 aa20.49■□□□□ 0.87
SEC61A2-209ENST00000441368 NDUFV1P49821 464 aa20.49■□□□□ 0.87
SEC61A2-209ENST00000441368 RBM23Q86U06 439 aaKnown RBP20.49■□□□□ 0.87
SEC61A2-209ENST00000441368 C4orf19Q8IY42 314 aa20.49■□□□□ 0.87
SEC61A2-209ENST00000441368 EXOC8Q8IYI6 725 aa20.49■□□□□ 0.87
SEC61A2-209ENST00000441368 ZNF579Q8NAF0 562 aaKnown RBP20.49■□□□□ 0.87
SEC61A2-209ENST00000441368 PSPC1Q8WXF1 523 aaKnown RBP20.49■□□□□ 0.87
SEC61A2-209ENST00000441368 TMEM143Q96AN5 459 aa20.49■□□□□ 0.87
SEC61A2-209ENST00000441368 CEP89Q96ST8 783 aa20.49■□□□□ 0.87
SEC61A2-209ENST00000441368 TTC12Q9H892 705 aaPredicted RBP20.49■□□□□ 0.87
SEC61A2-209ENST00000441368 FAM50BQ9Y247 325 aa20.49■□□□□ 0.87
SEC61A2-209ENST00000441368 COL4A3BPQ9Y5P4 624 aa20.49■□□□□ 0.87
SEC61A2-209ENST00000441368 FGF18O76093 207 aa20.48■□□□□ 0.87
SEC61A2-209ENST00000441368 SRGAP2CP0DJJ0 459 aa20.48■□□□□ 0.87
SEC61A2-209ENST00000441368 MCM7P33993 719 aa20.48■□□□□ 0.87
SEC61A2-209ENST00000441368 GTF2F1P35269 517 aaKnown RBP eCLIP20.48■□□□□ 0.87
SEC61A2-209ENST00000441368 IRS1P35568 1242 aa20.48■□□□□ 0.87
SEC61A2-209ENST00000441368 FAM189BP81408 668 aa20.48■□□□□ 0.87
SEC61A2-209ENST00000441368 EMC2Q15006 297 aa20.48■□□□□ 0.87
SEC61A2-209ENST00000441368 CSPP1Q1MSJ5 1256 aa20.48■□□□□ 0.87
SEC61A2-209ENST00000441368 PUS10Q3MIT2 529 aaKnown RBP20.48■□□□□ 0.87
SEC61A2-209ENST00000441368 LONRF3Q496Y0 759 aa20.48■□□□□ 0.87
SEC61A2-209ENST00000441368 HELQQ8TDG4 1101 aa20.48■□□□□ 0.87
SEC61A2-209ENST00000441368 EIF2AK1Q9BQI3 630 aaKnown RBP20.48■□□□□ 0.87
SEC61A2-209ENST00000441368 NRIP1P48552 1158 aa20.47■□□□□ 0.87
SEC61A2-209ENST00000441368 SPIRE1Q08AE8 756 aa20.47■□□□□ 0.87
SEC61A2-209ENST00000441368 C8orf34Q49A92 452 aa20.47■□□□□ 0.87
SEC61A2-209ENST00000441368 ADGRD2Q7Z7M1 963 aa20.47■□□□□ 0.87
SEC61A2-209ENST00000441368 NEK9Q8TD19 979 aa20.47■□□□□ 0.87
SEC61A2-209ENST00000441368 TCP11Q8WWU5 503 aa20.47■□□□□ 0.87
SEC61A2-209ENST00000441368 ZSCAN31Q96LW9 406 aaPredicted RBP20.47■□□□□ 0.87
SEC61A2-209ENST00000441368 ZNF558Q96NG5 402 aa20.47■□□□□ 0.87
SEC61A2-209ENST00000441368 CASD1Q96PB1 797 aa20.47■□□□□ 0.87
SEC61A2-209ENST00000441368 MTRQ99707 1265 aa20.47■□□□□ 0.87
SEC61A2-209ENST00000441368 TLR9Q9NR96 1032 aa20.47■□□□□ 0.87
SEC61A2-209ENST00000441368 PPME1Q9Y570 386 aa20.47■□□□□ 0.87
SEC61A2-209ENST00000441368 PCDHGC5Q9Y5F6 944 aa20.47■□□□□ 0.87
SEC61A2-209ENST00000441368 A0A0U1RQF3 1178 aa20.46■□□□□ 0.87
SEC61A2-209ENST00000441368 WNT7AO00755 349 aa20.46■□□□□ 0.87
SEC61A2-209ENST00000441368 LINC01565O15544 149 aa20.46■□□□□ 0.87
SEC61A2-209ENST00000441368 CA8P35219 290 aa20.46■□□□□ 0.87
SEC61A2-209ENST00000441368 PBX3P40426 434 aa20.46■□□□□ 0.87
SEC61A2-209ENST00000441368 CAMK1Q14012 370 aa20.46■□□□□ 0.87
SEC61A2-209ENST00000441368 PRPF31Q8WWY3 499 aaKnown RBP20.46■□□□□ 0.87
SEC61A2-209ENST00000441368 LLPHQ9BRT6 129 aaKnown RBP20.46■□□□□ 0.87
SEC61A2-209ENST00000441368 DHX33Q9H6R0 707 aaKnown RBP20.46■□□□□ 0.87
SEC61A2-209ENST00000441368 CWH43Q9H720 699 aa20.46■□□□□ 0.87
SEC61A2-209ENST00000441368 ENTPD7Q9NQZ7 604 aa20.46■□□□□ 0.87
SEC61A2-209ENST00000441368 CHST12Q9NRB3 414 aa20.46■□□□□ 0.87
SEC61A2-209ENST00000441368 INPP5FQ9Y2H2 1132 aa20.46■□□□□ 0.87
SEC61A2-209ENST00000441368 GRXCR2A6NFK2 248 aa20.45■□□□□ 0.86
SEC61A2-209ENST00000441368 POTEMA6NI47 508 aa20.45■□□□□ 0.86
SEC61A2-209ENST00000441368 ZBTB39O15060 712 aa20.45■□□□□ 0.86
SEC61A2-209ENST00000441368 EOMESO95936 686 aa20.45■□□□□ 0.86
SEC61A2-209ENST00000441368 HMGN5P82970 282 aaKnown RBP20.45■□□□□ 0.86
SEC61A2-209ENST00000441368 UBE3AQ05086 875 aa20.45■□□□□ 0.86
SEC61A2-209ENST00000441368 LAMTOR4Q0VGL1 99 aa20.45■□□□□ 0.86
SEC61A2-209ENST00000441368 CLLU1OSQ5K130 101 aa20.45■□□□□ 0.86
SEC61A2-209ENST00000441368 PLPP4Q5VZY2 271 aa20.45■□□□□ 0.86
SEC61A2-209ENST00000441368 LPPQ93052 612 aa20.45■□□□□ 0.86
SEC61A2-209ENST00000441368 MRPL9Q9BYD2 267 aaKnown RBP20.45■□□□□ 0.86
SEC61A2-209ENST00000441368 TLE6Q9H808 572 aa20.45■□□□□ 0.86
SEC61A2-209ENST00000441368 SH2B1Q9NRF2 756 aaPredicted RBP20.45■□□□□ 0.86
SEC61A2-209ENST00000441368 RNF19AQ9NV58 838 aa20.45■□□□□ 0.86
SEC61A2-209ENST00000441368 PUF60Q9UHX1 559 aaKnown RBP20.45■□□□□ 0.86
SEC61A2-209ENST00000441368 GAS2O43903 313 aaKnown RBP20.44■□□□□ 0.86
SEC61A2-209ENST00000441368 TBX10O75333 385 aa20.44■□□□□ 0.86
SEC61A2-209ENST00000441368 ERLIN2O94905 339 aa20.44■□□□□ 0.86
SEC61A2-209ENST00000441368 SKIP12755 728 aa20.44■□□□□ 0.86
SEC61A2-209ENST00000441368 PPM1AP35813 382 aa20.44■□□□□ 0.86
SEC61A2-209ENST00000441368 PHKA2P46019 1235 aa20.44■□□□□ 0.86
SEC61A2-209ENST00000441368 DLX2Q07687 328 aaPredicted RBP20.44■□□□□ 0.86
SEC61A2-209ENST00000441368 KCNT2Q6UVM3 1135 aa20.44■□□□□ 0.86
SEC61A2-209ENST00000441368 RNF149Q8NC42 400 aa20.44■□□□□ 0.86
SEC61A2-209ENST00000441368 UPF2Q9HAU5 1272 aaKnown RBP20.44■□□□□ 0.86
SEC61A2-209ENST00000441368 FAM105AQ9NUU6 356 aa20.44■□□□□ 0.86
SEC61A2-209ENST00000441368 PER2O15055 1255 aa20.43■□□□□ 0.86
SEC61A2-209ENST00000441368 SLITRK3O94933 977 aa20.43■□□□□ 0.86
SEC61A2-209ENST00000441368 ATF7P17544 494 aaPredicted RBP20.43■□□□□ 0.86
SEC61A2-209ENST00000441368 RAB27AP51159 221 aa20.43■□□□□ 0.86
SEC61A2-209ENST00000441368 KRT17Q04695 432 aa20.43■□□□□ 0.86
SEC61A2-209ENST00000441368 RNASELQ05823 741 aaKnown RBP20.43■□□□□ 0.86
SEC61A2-209ENST00000441368 GLB1LQ6UWU2 654 aa20.43■□□□□ 0.86
SEC61A2-209ENST00000441368 LRRC55Q6ZSA7 311 aa20.43■□□□□ 0.86
SEC61A2-209ENST00000441368 SRGAP1Q7Z6B7 1085 aa20.43■□□□□ 0.86
SEC61A2-209ENST00000441368 FAM178BQ8IXR5 827 aa20.43■□□□□ 0.86
SEC61A2-209ENST00000441368 GJD3Q8N144 294 aa20.43■□□□□ 0.86
SEC61A2-209ENST00000441368 MRPS27Q92552 414 aaKnown RBP20.43■□□□□ 0.86
SEC61A2-209ENST00000441368 TCF25Q9BQ70 676 aa20.43■□□□□ 0.86
SEC61A2-209ENST00000441368 TMEM60Q9H2L4 133 aa20.43■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms