RNA–Protein interactions for RNA: ENST00000441135.1

SMPD4-210, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 4

Gene SMPD4, Length 699 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-210ENST00000441135 CYP4A11Q02928 519 aa20.32■□□□□ 0.84
SMPD4-210ENST00000441135 PAN2Q504Q3 1202 aaKnown RBP20.32■□□□□ 0.84
SMPD4-210ENST00000441135 ARL6IP4Q66PJ3 421 aaKnown RBP20.32■□□□□ 0.84
SMPD4-210ENST00000441135 TPH2Q8IWU9 490 aa20.32■□□□□ 0.84
SMPD4-210ENST00000441135 IGSF22Q8N9C0 903 aa20.32■□□□□ 0.84
SMPD4-210ENST00000441135 DHX33Q9H6R0 707 aaKnown RBP20.32■□□□□ 0.84
SMPD4-210ENST00000441135 ELAC1Q9H777 363 aaKnown RBP20.32■□□□□ 0.84
SMPD4-210ENST00000441135 UBE2ZQ9H832 354 aaPredicted RBP20.32■□□□□ 0.84
SMPD4-210ENST00000441135 NLRC5Q86WI3 1866 aa20.32■□□□□ 0.84
SMPD4-210ENST00000441135 SPATA31C1P0DKV0 1188 aa20.31■□□□□ 0.84
SMPD4-210ENST00000441135 ZSCAN20P17040 1043 aaPredicted RBP20.31■□□□□ 0.84
SMPD4-210ENST00000441135 IBSPP21815 317 aaPredicted RBP20.31■□□□□ 0.84
SMPD4-210ENST00000441135 RPA1P27694 616 aa20.31■□□□□ 0.84
SMPD4-210ENST00000441135 FAM189BP81408 668 aa20.31■□□□□ 0.84
SMPD4-210ENST00000441135 CTTNQ14247 550 aaKnown RBP20.31■□□□□ 0.84
SMPD4-210ENST00000441135 SLC7A3Q8WY07 619 aa20.31■□□□□ 0.84
SMPD4-210ENST00000441135 CEP170P1Q96L14 293 aa20.31■□□□□ 0.84
SMPD4-210ENST00000441135 GCOM2Q9BZD3 368 aaPredicted RBP20.31■□□□□ 0.84
SMPD4-210ENST00000441135 ATP6V0A4Q9HBG4 840 aa20.31■□□□□ 0.84
SMPD4-210ENST00000441135 MTMR6Q9Y217 621 aa20.31■□□□□ 0.84
SMPD4-210ENST00000441135 SPTBN5Q9NRC6 3674 aaKnown RBP20.31■□□□□ 0.84
SMPD4-210ENST00000441135 LOXHD1Q8IVV2 1947 aa20.31■□□□□ 0.84
SMPD4-210ENST00000441135 ARID2Q68CP9 1835 aa20.3■□□□□ 0.84
SMPD4-210ENST00000441135 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP20.3■□□□□ 0.84
SMPD4-210ENST00000441135 GRM6O15303 877 aa20.3■□□□□ 0.84
SMPD4-210ENST00000441135 HOXA2O43364 376 aa20.3■□□□□ 0.84
SMPD4-210ENST00000441135 STX6O43752 255 aa20.3■□□□□ 0.84
SMPD4-210ENST00000441135 GATMP50440 423 aa20.3■□□□□ 0.84
SMPD4-210ENST00000441135 RESTQ13127 1097 aa20.3■□□□□ 0.84
SMPD4-210ENST00000441135 DRP2Q13474 957 aa20.3■□□□□ 0.84
SMPD4-210ENST00000441135 TCEAL5Q5H9L2 206 aa20.3■□□□□ 0.84
SMPD4-210ENST00000441135 PLA2G4FQ68DD2 849 aa20.3■□□□□ 0.84
SMPD4-210ENST00000441135 ZNF410Q86VK4 478 aa20.3■□□□□ 0.84
SMPD4-210ENST00000441135 CATSPER3Q86XQ3 398 aa20.3■□□□□ 0.84
SMPD4-210ENST00000441135 SH2D3AQ9BRG2 576 aa20.3■□□□□ 0.84
SMPD4-210ENST00000441135 ZSCAN16Q9H4T2 348 aaPredicted RBP20.3■□□□□ 0.84
SMPD4-210ENST00000441135 AAASQ9NRG9 546 aa20.3■□□□□ 0.84
SMPD4-210ENST00000441135 SUCLA2Q9P2R7 463 aaPredicted RBP20.3■□□□□ 0.84
SMPD4-210ENST00000441135 PLAGL2Q9UPG8 496 aa20.3■□□□□ 0.84
SMPD4-210ENST00000441135 XIRP2A4UGR9 3374 aa20.3■□□□□ 0.84
SMPD4-210ENST00000441135 TBKBP1A7MCY6 615 aa20.29■□□□□ 0.84
SMPD4-210ENST00000441135 NCK2O43639 380 aa20.29■□□□□ 0.84
SMPD4-210ENST00000441135 SFPQP23246 707 aaKnown RBP eCLIP20.29■□□□□ 0.84
SMPD4-210ENST00000441135 COL19A1Q14993 1142 aa20.29■□□□□ 0.84
SMPD4-210ENST00000441135 DTHD1Q6ZMT9 781 aa20.29■□□□□ 0.84
SMPD4-210ENST00000441135 KCTD17Q8N5Z5 321 aa20.29■□□□□ 0.84
SMPD4-210ENST00000441135 ZNF668Q96K58 619 aaPredicted RBP20.29■□□□□ 0.84
SMPD4-210ENST00000441135 INO80BQ9C086 356 aaPredicted RBP20.29■□□□□ 0.84
SMPD4-210ENST00000441135 DACT1Q9NYF0 836 aa20.29■□□□□ 0.84
SMPD4-210ENST00000441135 LRWD1Q9UFC0 647 aa20.29■□□□□ 0.84
SMPD4-210ENST00000441135 DBR1Q9UK59 544 aaKnown RBP20.29■□□□□ 0.84
SMPD4-210ENST00000441135 HSP90AA1P07900 732 aaKnown RBP20.28■□□□□ 0.84
SMPD4-210ENST00000441135 KCNA5P22460 613 aa20.28■□□□□ 0.84
SMPD4-210ENST00000441135 POLGP54098 1239 aaPredicted RBP20.28■□□□□ 0.84
SMPD4-210ENST00000441135 NPEPPSP55786 919 aa20.28■□□□□ 0.84
SMPD4-210ENST00000441135 CSPP1Q1MSJ5 1256 aa20.28■□□□□ 0.84
SMPD4-210ENST00000441135 LEXMQ3ZCV2 418 aa20.28■□□□□ 0.84
SMPD4-210ENST00000441135 XKR9Q5GH70 373 aa20.28■□□□□ 0.84
SMPD4-210ENST00000441135 PABPC5Q96DU9 382 aaKnown RBP20.28■□□□□ 0.84
SMPD4-210ENST00000441135 NACC1Q96RE7 527 aa20.28■□□□□ 0.84
SMPD4-210ENST00000441135 TMEM117Q9H0C3 514 aa20.28■□□□□ 0.84
SMPD4-210ENST00000441135 MORC2Q9Y6X9 1032 aaPredicted RBP20.28■□□□□ 0.84
SMPD4-210ENST00000441135 SLC26A4O43511 780 aa20.27■□□□□ 0.84
SMPD4-210ENST00000441135 MED24O75448 989 aa20.27■□□□□ 0.84
SMPD4-210ENST00000441135 DGAT1O75907 488 aa20.27■□□□□ 0.84
SMPD4-210ENST00000441135 RARRES1P49788 294 aa20.27■□□□□ 0.84
SMPD4-210ENST00000441135 FAM102BQ5T8I3 360 aa20.27■□□□□ 0.84
SMPD4-210ENST00000441135 FERMT3Q86UX7 667 aa20.27■□□□□ 0.84
SMPD4-210ENST00000441135 ECHDC2Q86YB7 292 aa20.27■□□□□ 0.84
SMPD4-210ENST00000441135 RHPN2Q8IUC4 686 aa20.27■□□□□ 0.84
SMPD4-210ENST00000441135 KLHL23Q8NBE8 558 aa20.27■□□□□ 0.84
SMPD4-210ENST00000441135 TCP11Q8WWU5 503 aa20.27■□□□□ 0.84
SMPD4-210ENST00000441135 PPP2R3CQ969Q6 453 aa20.27■□□□□ 0.84
SMPD4-210ENST00000441135 ALG13Q9NP73 1137 aaKnown RBP20.27■□□□□ 0.84
SMPD4-210ENST00000441135 CHST12Q9NRB3 414 aa20.27■□□□□ 0.84
SMPD4-210ENST00000441135 FOXD4L1Q9NU39 408 aa20.27■□□□□ 0.84
SMPD4-210ENST00000441135 PCDHB12Q9Y5F1 795 aa20.27■□□□□ 0.84
SMPD4-210ENST00000441135 BRWD1Q9NSI6 2320 aa20.27■□□□□ 0.84
SMPD4-210ENST00000441135 NCOR1O75376 2440 aa20.26■□□□□ 0.83
SMPD4-210ENST00000441135 A0A087WZ62 844 aa20.26■□□□□ 0.83
SMPD4-210ENST00000441135 A0A0U1RQF3 1178 aa20.26■□□□□ 0.83
SMPD4-210ENST00000441135 ITGB1P05556 798 aa20.26■□□□□ 0.83
SMPD4-210ENST00000441135 FGFR1P11362 822 aa20.26■□□□□ 0.83
SMPD4-210ENST00000441135 EMC2Q15006 297 aa20.26■□□□□ 0.83
SMPD4-210ENST00000441135 IL17AQ16552 155 aa20.26■□□□□ 0.83
SMPD4-210ENST00000441135 PUS10Q3MIT2 529 aaKnown RBP20.26■□□□□ 0.83
SMPD4-210ENST00000441135 SPOUT1Q5T280 376 aaKnown RBP20.26■□□□□ 0.83
SMPD4-210ENST00000441135 ABI1Q8IZP0 508 aa20.26■□□□□ 0.83
SMPD4-210ENST00000441135 ZNF579Q8NAF0 562 aaKnown RBP20.26■□□□□ 0.83
SMPD4-210ENST00000441135 PSPC1Q8WXF1 523 aaKnown RBP20.26■□□□□ 0.83
SMPD4-210ENST00000441135 AK8Q96MA6 479 aa20.26■□□□□ 0.83
SMPD4-210ENST00000441135 NLRP4Q96MN2 994 aa20.26■□□□□ 0.83
SMPD4-210ENST00000441135 NECAB3Q96P71 396 aaPredicted RBP20.26■□□□□ 0.83
SMPD4-210ENST00000441135 FDXACB1Q9BRP7 624 aaPredicted RBP20.26■□□□□ 0.83
SMPD4-210ENST00000441135 COL4A3BPQ9Y5P4 624 aa20.26■□□□□ 0.83
SMPD4-210ENST00000441135 BDP1A6H8Y1 2624 aa20.25■□□□□ 0.83
SMPD4-210ENST00000441135 ASAP2O43150 1006 aa20.25■□□□□ 0.83
SMPD4-210ENST00000441135 EOMESO95936 686 aa20.25■□□□□ 0.83
SMPD4-210ENST00000441135 LAG3P18627 525 aa20.25■□□□□ 0.83
SMPD4-210ENST00000441135 FGFR4P22455 802 aa20.25■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms