RNA–Protein interactions for RNA: ENST00000439886.5

SMPD4-209, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 2

Gene SMPD4, Length 3,371 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-209ENST00000439886 SEPT7Q16181 437 aaKnown RBP12.58□□□□□ -0.39
SMPD4-209ENST00000439886 SDCCAG8Q86SQ7 713 aaPredicted RBP12.58□□□□□ -0.39
SMPD4-209ENST00000439886 PITPNM3Q9BZ71 974 aa12.58□□□□□ -0.39
SMPD4-209ENST00000439886 STK17AQ9UEE5 414 aa12.58□□□□□ -0.39
SMPD4-209ENST00000439886 MAD2L2Q9UI95 211 aa12.58□□□□□ -0.39
SMPD4-209ENST00000439886 A0A1B0GVG6 124 aa12.58□□□□□ -0.4
SMPD4-209ENST00000439886 LUC7L3O95232 432 aaKnown RBP12.58□□□□□ -0.4
SMPD4-209ENST00000439886 PLA2G4BP0C869 781 aa12.58□□□□□ -0.4
SMPD4-209ENST00000439886 CYP2J2P51589 502 aa12.58□□□□□ -0.4
SMPD4-209ENST00000439886 ADCY7P51828 1080 aa12.58□□□□□ -0.4
SMPD4-209ENST00000439886 IKQ13123 557 aaPredicted RBP12.58□□□□□ -0.4
SMPD4-209ENST00000439886 ITIH4Q14624 930 aa12.58□□□□□ -0.4
SMPD4-209ENST00000439886 SEL1L2Q5TEA6 688 aa12.58□□□□□ -0.4
SMPD4-209ENST00000439886 MIS18BP1Q6P0N0 1132 aa12.58□□□□□ -0.4
SMPD4-209ENST00000439886 MAGEC3Q8TD91 643 aa12.58□□□□□ -0.4
SMPD4-209ENST00000439886 TEKT4Q8WW24 435 aa12.58□□□□□ -0.4
SMPD4-209ENST00000439886 ERP27Q96DN0 273 aa12.58□□□□□ -0.4
SMPD4-209ENST00000439886 ZNF317Q96PQ6 595 aaPredicted RBP12.58□□□□□ -0.4
SMPD4-209ENST00000439886 NAP1L3Q99457 506 aaPredicted RBP12.58□□□□□ -0.4
SMPD4-209ENST00000439886 POP1Q99575 1024 aaKnown RBP12.58□□□□□ -0.4
SMPD4-209ENST00000439886 EDEM3Q9BZQ6 932 aa12.58□□□□□ -0.4
SMPD4-209ENST00000439886 DDX25Q9UHL0 483 aaKnown RBP12.58□□□□□ -0.4
SMPD4-209ENST00000439886 ASAP2O43150 1006 aa12.58□□□□□ -0.4
SMPD4-209ENST00000439886 CWF19L1Q69YN2 538 aaKnown RBP12.58□□□□□ -0.4
SMPD4-209ENST00000439886 CCDC137Q6PK04 289 aaKnown RBP12.58□□□□□ -0.4
SMPD4-209ENST00000439886 SMIM5Q71RC9 77 aa12.58□□□□□ -0.4
SMPD4-209ENST00000439886 CLEC10AQ8IUN9 316 aa12.58□□□□□ -0.4
SMPD4-209ENST00000439886 MIPOL1Q8TD10 442 aa12.58□□□□□ -0.4
SMPD4-209ENST00000439886 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP12.58□□□□□ -0.4
SMPD4-209ENST00000439886 FAM118BQ9BPY3 351 aa12.58□□□□□ -0.4
SMPD4-209ENST00000439886 METTL5Q9NRN9 209 aaKnown RBP12.58□□□□□ -0.4
SMPD4-209ENST00000439886 ARFGEF2Q9Y6D5 1785 aa12.57□□□□□ -0.4
SMPD4-209ENST00000439886 DPPA5A6NC42 116 aa12.57□□□□□ -0.4
SMPD4-209ENST00000439886 THAP12O43422 761 aa12.57□□□□□ -0.4
SMPD4-209ENST00000439886 SLC16A2P36021 539 aa12.57□□□□□ -0.4
SMPD4-209ENST00000439886 GJA8P48165 433 aa12.57□□□□□ -0.4
SMPD4-209ENST00000439886 CASP4P49662 377 aa12.57□□□□□ -0.4
SMPD4-209ENST00000439886 CUL3Q13618 768 aa12.57□□□□□ -0.4
SMPD4-209ENST00000439886 TSNAXIP1Q2TAA8 658 aa12.57□□□□□ -0.4
SMPD4-209ENST00000439886 NSMFQ6X4W1 530 aa12.57□□□□□ -0.4
SMPD4-209ENST00000439886 MFN1Q8IWA4 741 aa12.57□□□□□ -0.4
SMPD4-209ENST00000439886 DTX3LQ8TDB6 740 aa12.57□□□□□ -0.4
SMPD4-209ENST00000439886 SPIRE2Q8WWL2 714 aa12.57□□□□□ -0.4
SMPD4-209ENST00000439886 RBM17Q96I25 401 aaKnown RBP12.57□□□□□ -0.4
SMPD4-209ENST00000439886 EYA3Q99504 573 aa12.57□□□□□ -0.4
SMPD4-209ENST00000439886 ARPC5LQ9BPX5 153 aa12.57□□□□□ -0.4
SMPD4-209ENST00000439886 EBF2Q9HAK2 575 aa12.57□□□□□ -0.4
SMPD4-209ENST00000439886 POTEFA5A3E0 1075 aa12.57□□□□□ -0.4
SMPD4-209ENST00000439886 ATMINO43313 823 aaPredicted RBP12.57□□□□□ -0.4
SMPD4-209ENST00000439886 POTEIP0CG38 1075 aa12.57□□□□□ -0.4
SMPD4-209ENST00000439886 RPL21P46778 160 aaKnown RBP12.57□□□□□ -0.4
SMPD4-209ENST00000439886 KYNUQ16719 465 aa12.57□□□□□ -0.4
SMPD4-209ENST00000439886 POTEGQ6S5H5 508 aa12.57□□□□□ -0.4
SMPD4-209ENST00000439886 POTEEQ6S8J3 1075 aa12.57□□□□□ -0.4
SMPD4-209ENST00000439886 NT5DC3Q86UY8 548 aa12.57□□□□□ -0.4
SMPD4-209ENST00000439886 C1orf54Q8WWF1 131 aa12.57□□□□□ -0.4
SMPD4-209ENST00000439886 IKZF4Q9H2S9 585 aa12.57□□□□□ -0.4
SMPD4-209ENST00000439886 UNC45AQ9H3U1 944 aa12.57□□□□□ -0.4
SMPD4-209ENST00000439886 SH3GLB2Q9NR46 395 aa12.57□□□□□ -0.4
SMPD4-209ENST00000439886 ADAM22Q9P0K1 906 aa12.57□□□□□ -0.4
SMPD4-209ENST00000439886 ARL2BPQ9Y2Y0 163 aa12.57□□□□□ -0.4
SMPD4-209ENST00000439886 USP17L5A8MUK1 530 aa12.56□□□□□ -0.4
SMPD4-209ENST00000439886 POC1B-GALNT4F8VUJ3 575 aa12.56□□□□□ -0.4
SMPD4-209ENST00000439886 AHCYL1O43865 530 aa12.56□□□□□ -0.4
SMPD4-209ENST00000439886 GNA14O95837 355 aa12.56□□□□□ -0.4
SMPD4-209ENST00000439886 AGTP01019 485 aa12.56□□□□□ -0.4
SMPD4-209ENST00000439886 GSTA1P08263 222 aa12.56□□□□□ -0.4
SMPD4-209ENST00000439886 ATP4AP20648 1035 aa12.56□□□□□ -0.4
SMPD4-209ENST00000439886 HIBADHP31937 336 aaKnown RBP12.56□□□□□ -0.4
SMPD4-209ENST00000439886 PICALMQ13492 652 aa12.56□□□□□ -0.4
SMPD4-209ENST00000439886 GRM4Q14833 912 aa12.56□□□□□ -0.4
SMPD4-209ENST00000439886 TMED2Q15363 201 aa12.56□□□□□ -0.4
SMPD4-209ENST00000439886 ECM1Q16610 540 aa12.56□□□□□ -0.4
SMPD4-209ENST00000439886 RNF168Q8IYW5 571 aaPredicted RBP12.56□□□□□ -0.4
SMPD4-209ENST00000439886 FITM2Q8N6M3 262 aa12.56□□□□□ -0.4
SMPD4-209ENST00000439886 SH3RF3Q8TEJ3 882 aaPredicted RBP12.56□□□□□ -0.4
SMPD4-209ENST00000439886 RBM41Q96IZ5 413 aaKnown RBP12.56□□□□□ -0.4
SMPD4-209ENST00000439886 RMDN2Q96LZ7 410 aa12.56□□□□□ -0.4
SMPD4-209ENST00000439886 RAB3IPQ96QF0 476 aaPredicted RBP12.56□□□□□ -0.4
SMPD4-209ENST00000439886 ANKIB1Q9P2G1 1089 aa12.56□□□□□ -0.4
SMPD4-209ENST00000439886 ZMYND8Q9ULU4 1186 aaPredicted RBP12.56□□□□□ -0.4
SMPD4-209ENST00000439886 SPDYE5A6NIY4 337 aa12.56□□□□□ -0.4
SMPD4-209ENST00000439886 TOM1O60784 492 aa12.56□□□□□ -0.4
SMPD4-209ENST00000439886 TBCAO75347 108 aaKnown RBP12.56□□□□□ -0.4
SMPD4-209ENST00000439886 HSPA2P54652 639 aa12.56□□□□□ -0.4
SMPD4-209ENST00000439886 PDIA5Q14554 519 aa12.56□□□□□ -0.4
SMPD4-209ENST00000439886 CNGA2Q16280 664 aa12.56□□□□□ -0.4
SMPD4-209ENST00000439886 TBC1D10BQ4KMP7 808 aaPredicted RBP12.56□□□□□ -0.4
SMPD4-209ENST00000439886 SAPCD2Q86UD0 394 aa12.56□□□□□ -0.4
SMPD4-209ENST00000439886 TRIM59Q8IWR1 403 aa12.56□□□□□ -0.4
SMPD4-209ENST00000439886 UBL4BQ8N7F7 174 aa12.56□□□□□ -0.4
SMPD4-209ENST00000439886 ATXN2LQ8WWM7 1075 aaKnown RBP12.56□□□□□ -0.4
SMPD4-209ENST00000439886 PWWP2AQ96N64 755 aa12.56□□□□□ -0.4
SMPD4-209ENST00000439886 DNAAF2Q9NVR5 837 aaKnown RBP12.56□□□□□ -0.4
SMPD4-209ENST00000439886 SLC12A4Q9UP95 1085 aa12.56□□□□□ -0.4
SMPD4-209ENST00000439886 SRRM3A6NNA2 597 aaPredicted RBP12.56□□□□□ -0.4
SMPD4-209ENST00000439886 DDX3XO00571 662 aaKnown RBP eCLIP12.56□□□□□ -0.4
SMPD4-209ENST00000439886 ZBTB16Q05516 673 aa12.56□□□□□ -0.4
SMPD4-209ENST00000439886 DNAJC3Q13217 504 aa12.56□□□□□ -0.4
SMPD4-209ENST00000439886 EAPPQ56P03 285 aaPredicted RBP12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms