RNA–Protein interactions for RNA: ENST00000439027.1

AC011228.1-201, humanhuman

TSL 1 (best) BASIC

Gene AC011228.1, Length 757 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC011228.1-201ENST00000439027 IFNAR1P17181 557 aa10.35□□□□□ -0.75
AC011228.1-201ENST00000439027 TMOD1P28289 359 aa10.35□□□□□ -0.75
AC011228.1-201ENST00000439027 CIITAP33076 1130 aa10.35□□□□□ -0.75
AC011228.1-201ENST00000439027 NLRP11P59045 1033 aaKnown RBP10.35□□□□□ -0.75
AC011228.1-201ENST00000439027 HMGN5P82970 282 aaKnown RBP10.35□□□□□ -0.75
AC011228.1-201ENST00000439027 SSRP1Q08945 709 aaKnown RBP10.35□□□□□ -0.75
AC011228.1-201ENST00000439027 SMAD4Q13485 552 aaKnown RBP10.35□□□□□ -0.75
AC011228.1-201ENST00000439027 SMAD2Q15796 467 aaKnown RBP10.35□□□□□ -0.75
AC011228.1-201ENST00000439027 EFCAB12Q6NXP0 572 aa10.35□□□□□ -0.75
AC011228.1-201ENST00000439027 FAM43BQ6ZT52 329 aaPredicted RBP10.35□□□□□ -0.75
AC011228.1-201ENST00000439027 ADGRD2Q7Z7M1 963 aa10.35□□□□□ -0.75
AC011228.1-201ENST00000439027 FAM228AQ86W67 206 aa10.35□□□□□ -0.75
AC011228.1-201ENST00000439027 TRIM22Q8IYM9 498 aa10.35□□□□□ -0.75
AC011228.1-201ENST00000439027 THNSL1Q8IYQ7 743 aa10.35□□□□□ -0.75
AC011228.1-201ENST00000439027 LRRC71Q8N4P6 559 aa10.35□□□□□ -0.75
AC011228.1-201ENST00000439027 RNF169Q8NCN4 708 aa10.35□□□□□ -0.75
AC011228.1-201ENST00000439027 ZNF668Q96K58 619 aaPredicted RBP10.35□□□□□ -0.75
AC011228.1-201ENST00000439027 SCLT1Q96NL6 688 aa10.35□□□□□ -0.75
AC011228.1-201ENST00000439027 RNF26Q9BY78 433 aaPredicted RBP10.35□□□□□ -0.75
AC011228.1-201ENST00000439027 TLE6Q9H808 572 aa10.35□□□□□ -0.75
AC011228.1-201ENST00000439027 DISC1Q9NRI5 854 aa10.35□□□□□ -0.75
AC011228.1-201ENST00000439027 TYW1Q9NV66 732 aaKnown RBP10.35□□□□□ -0.75
AC011228.1-201ENST00000439027 ORC3Q9UBD5 711 aaPredicted RBP10.35□□□□□ -0.75
AC011228.1-201ENST00000439027 PCDHGC5Q9Y5F6 944 aa10.35□□□□□ -0.75
AC011228.1-201ENST00000439027 C9IYK1 514 aa10.34□□□□□ -0.75
AC011228.1-201ENST00000439027 MSH4O15457 936 aa10.34□□□□□ -0.75
AC011228.1-201ENST00000439027 TBX10O75333 385 aa10.34□□□□□ -0.75
AC011228.1-201ENST00000439027 GPR32O75388 356 aa10.34□□□□□ -0.75
AC011228.1-201ENST00000439027 OATP04181 439 aa10.34□□□□□ -0.75
AC011228.1-201ENST00000439027 ZSCAN20P17040 1043 aaPredicted RBP10.34□□□□□ -0.75
AC011228.1-201ENST00000439027 USP11P51784 963 aa10.34□□□□□ -0.75
AC011228.1-201ENST00000439027 CAMK2BQ13554 666 aa10.34□□□□□ -0.75
AC011228.1-201ENST00000439027 LRCH2Q5VUJ6 765 aa10.34□□□□□ -0.75
AC011228.1-201ENST00000439027 EFHBQ8N7U6 833 aa10.34□□□□□ -0.75
AC011228.1-201ENST00000439027 FAM184AQ8NB25 1140 aa10.34□□□□□ -0.75
AC011228.1-201ENST00000439027 GJA10Q969M2 543 aa10.34□□□□□ -0.75
AC011228.1-201ENST00000439027 POP1Q99575 1024 aaKnown RBP10.34□□□□□ -0.75
AC011228.1-201ENST00000439027 TEKT3Q9BXF9 490 aa10.34□□□□□ -0.75
AC011228.1-201ENST00000439027 TMEM161AQ9NX61 479 aa10.34□□□□□ -0.75
AC011228.1-201ENST00000439027 HCSTQ9UBK5 93 aa10.34□□□□□ -0.75
AC011228.1-201ENST00000439027 KIF3AQ9Y496 699 aa10.34□□□□□ -0.75
AC011228.1-201ENST00000439027 ZDBF2Q9HCK1 2354 aa10.33□□□□□ -0.76
AC011228.1-201ENST00000439027 PRR33A8MZF0 331 aa10.33□□□□□ -0.76
AC011228.1-201ENST00000439027 ARHGAP33O14559 1287 aa10.33□□□□□ -0.76
AC011228.1-201ENST00000439027 PER2O15055 1255 aa10.33□□□□□ -0.76
AC011228.1-201ENST00000439027 ZNF862O60290 1169 aa10.33□□□□□ -0.76
AC011228.1-201ENST00000439027 FGF18O76093 207 aa10.33□□□□□ -0.76
AC011228.1-201ENST00000439027 FDPSP14324 419 aaKnown RBP10.33□□□□□ -0.76
AC011228.1-201ENST00000439027 DDIT3P35638 169 aa10.33□□□□□ -0.76
AC011228.1-201ENST00000439027 JAK3P52333 1124 aa10.33□□□□□ -0.76
AC011228.1-201ENST00000439027 FOSBP53539 338 aa10.33□□□□□ -0.76
AC011228.1-201ENST00000439027 FAM189BP81408 668 aa10.33□□□□□ -0.76
AC011228.1-201ENST00000439027 PRKCEQ02156 737 aa10.33□□□□□ -0.76
AC011228.1-201ENST00000439027 UBE3AQ05086 875 aa10.33□□□□□ -0.76
AC011228.1-201ENST00000439027 TBC1D8BQ0IIM8 1120 aa10.33□□□□□ -0.76
AC011228.1-201ENST00000439027 DSC3Q14574 896 aa10.33□□□□□ -0.76
AC011228.1-201ENST00000439027 LARP1BQ659C4 914 aaKnown RBP10.33□□□□□ -0.76
AC011228.1-201ENST00000439027 MIER3Q7Z3K6 550 aa10.33□□□□□ -0.76
AC011228.1-201ENST00000439027 ABI1Q8IZP0 508 aa10.33□□□□□ -0.76
AC011228.1-201ENST00000439027 COLGALT1Q8NBJ5 622 aa10.33□□□□□ -0.76
AC011228.1-201ENST00000439027 TBCKQ8TEA7 893 aa10.33□□□□□ -0.76
AC011228.1-201ENST00000439027 NLRP7Q8WX94 980 aa10.33□□□□□ -0.76
AC011228.1-201ENST00000439027 SLC5A5Q92911 643 aa10.33□□□□□ -0.76
AC011228.1-201ENST00000439027 LENG9Q96B70 501 aa10.33□□□□□ -0.76
AC011228.1-201ENST00000439027 RIT2Q99578 217 aa10.33□□□□□ -0.76
AC011228.1-201ENST00000439027 TMEM117Q9H0C3 514 aa10.33□□□□□ -0.76
AC011228.1-201ENST00000439027 ADAMTS10Q9H324 1103 aa10.33□□□□□ -0.76
AC011228.1-201ENST00000439027 UNC45AQ9H3U1 944 aa10.33□□□□□ -0.76
AC011228.1-201ENST00000439027 SH3GLB2Q9NR46 395 aa10.33□□□□□ -0.76
AC011228.1-201ENST00000439027 TLR9Q9NR96 1032 aa10.33□□□□□ -0.76
AC011228.1-201ENST00000439027 CLEC1BQ9P126 229 aa10.33□□□□□ -0.76
AC011228.1-201ENST00000439027 PUF60Q9UHX1 559 aaKnown RBP10.33□□□□□ -0.76
AC011228.1-201ENST00000439027 BARX2Q9UMQ3 279 aaPredicted RBP10.33□□□□□ -0.76
AC011228.1-201ENST00000439027 TRIOO75962 3097 aa10.33□□□□□ -0.76
AC011228.1-201ENST00000439027 HOXA2O43364 376 aa10.32□□□□□ -0.76
AC011228.1-201ENST00000439027 EDIL3O43854 480 aa10.32□□□□□ -0.76
AC011228.1-201ENST00000439027 DEXIO95424 95 aa10.32□□□□□ -0.76
AC011228.1-201ENST00000439027 LAG3P18627 525 aa10.32□□□□□ -0.76
AC011228.1-201ENST00000439027 PDCP20941 246 aa10.32□□□□□ -0.76
AC011228.1-201ENST00000439027 SYT1P21579 422 aa10.32□□□□□ -0.76
AC011228.1-201ENST00000439027 FGFR4P22455 802 aa10.32□□□□□ -0.76
AC011228.1-201ENST00000439027 EIF4BP23588 611 aaKnown RBP10.32□□□□□ -0.76
AC011228.1-201ENST00000439027 SFNP31947 248 aa10.32□□□□□ -0.76
AC011228.1-201ENST00000439027 ERVFC1P60507 584 aa10.32□□□□□ -0.76
AC011228.1-201ENST00000439027 UGCGQ16739 394 aa10.32□□□□□ -0.76
AC011228.1-201ENST00000439027 MTERF2Q49AM1 385 aa10.32□□□□□ -0.76
AC011228.1-201ENST00000439027 PLPP4Q5VZY2 271 aa10.32□□□□□ -0.76
AC011228.1-201ENST00000439027 RNF135Q8IUD6 432 aa10.32□□□□□ -0.76
AC011228.1-201ENST00000439027 ZNF454Q8N9F8 522 aa10.32□□□□□ -0.76
AC011228.1-201ENST00000439027 MSLNLQ96KJ4 702 aa10.32□□□□□ -0.76
AC011228.1-201ENST00000439027 AIFM3Q96NN9 605 aa10.32□□□□□ -0.76
AC011228.1-201ENST00000439027 ELAC1Q9H777 363 aaKnown RBP10.32□□□□□ -0.76
AC011228.1-201ENST00000439027 ENTPD7Q9NQZ7 604 aa10.32□□□□□ -0.76
AC011228.1-201ENST00000439027 CHMP5Q9NZZ3 219 aa10.32□□□□□ -0.76
AC011228.1-201ENST00000439027 SEPT9Q9UHD8 586 aaPredicted RBP10.32□□□□□ -0.76
AC011228.1-201ENST00000439027 MUTYHQ9UIF7 546 aa10.32□□□□□ -0.76
AC011228.1-201ENST00000439027 PCDHA4Q9UN74 947 aa10.32□□□□□ -0.76
AC011228.1-201ENST00000439027 ARIH1Q9Y4X5 557 aaPredicted RBP10.32□□□□□ -0.76
AC011228.1-201ENST00000439027 C5orf42Q9H799 3197 aa10.32□□□□□ -0.76
AC011228.1-201ENST00000439027 STK36Q9NRP7 1315 aa10.32□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms