RNA–Protein interactions for RNA: ENST00000438801.1

HMGB1P18-201, Transcript of high mobility group box 1 pseudogene 18, humanhuman

BASIC

Gene HMGB1P18, Length 619 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P18-201ENST00000438801 JMYQ8N9B5 988 aa4.44□□□□□ -1.7
HMGB1P18-201ENST00000438801 IGSF22Q8N9C0 903 aa4.44□□□□□ -1.7
HMGB1P18-201ENST00000438801 ZSWIM2Q8NEG5 633 aa4.44□□□□□ -1.7
HMGB1P18-201ENST00000438801 LPPQ93052 612 aa4.44□□□□□ -1.7
HMGB1P18-201ENST00000438801 ARMC5Q96C12 935 aa4.44□□□□□ -1.7
HMGB1P18-201ENST00000438801 FOXRED1Q96CU9 486 aaPredicted RBP4.44□□□□□ -1.7
HMGB1P18-201ENST00000438801 DNAJC7Q99615 494 aa4.44□□□□□ -1.7
HMGB1P18-201ENST00000438801 MRPL4Q9BYD3 311 aaKnown RBP4.44□□□□□ -1.7
HMGB1P18-201ENST00000438801 ZNF703Q9H7S9 590 aaPredicted RBP4.44□□□□□ -1.7
HMGB1P18-201ENST00000438801 CTDP1Q9Y5B0 961 aaPredicted RBP4.44□□□□□ -1.7
HMGB1P18-201ENST00000438801 RTEL1-TNFRSF6BF6WH68 1400 aa4.44□□□□□ -1.7
HMGB1P18-201ENST00000438801 FANCAO15360 1455 aa4.43□□□□□ -1.7
HMGB1P18-201ENST00000438801 GRIN2BQ13224 1484 aa4.43□□□□□ -1.7
HMGB1P18-201ENST00000438801 RUSC2Q8N2Y8 1516 aa4.43□□□□□ -1.7
HMGB1P18-201ENST00000438801 CUL7Q14999 1698 aa4.43□□□□□ -1.7
HMGB1P18-201ENST00000438801 A0A1W2PRX2 142 aa4.43□□□□□ -1.7
HMGB1P18-201ENST00000438801 KRTAP23-1A1A580 65 aa4.43□□□□□ -1.7
HMGB1P18-201ENST00000438801 CYP27B1O15528 508 aa4.43□□□□□ -1.7
HMGB1P18-201ENST00000438801 KCNQ2O43526 872 aa4.43□□□□□ -1.7
HMGB1P18-201ENST00000438801 RAPGEF3O95398 923 aa4.43□□□□□ -1.7
HMGB1P18-201ENST00000438801 ZBTB48P10074 688 aaPredicted RBP4.43□□□□□ -1.7
HMGB1P18-201ENST00000438801 STAT3P40763 770 aa4.43□□□□□ -1.7
HMGB1P18-201ENST00000438801 ATP2C1P98194 919 aaPredicted RBP4.43□□□□□ -1.7
HMGB1P18-201ENST00000438801 PURAQ00577 322 aaKnown RBP4.43□□□□□ -1.7
HMGB1P18-201ENST00000438801 SAFB2Q14151 953 aaKnown RBP eCLIP4.43□□□□□ -1.7
HMGB1P18-201ENST00000438801 FNDC7Q5VTL7 733 aa4.43□□□□□ -1.7
HMGB1P18-201ENST00000438801 SPTY2D1Q68D10 685 aaPredicted RBP4.43□□□□□ -1.7
HMGB1P18-201ENST00000438801 CC2D1AQ6P1N0 951 aaPredicted RBP4.43□□□□□ -1.7
HMGB1P18-201ENST00000438801 KLHDC10Q6PID8 442 aa4.43□□□□□ -1.7
HMGB1P18-201ENST00000438801 TMPRSS6Q8IU80 811 aa4.43□□□□□ -1.7
HMGB1P18-201ENST00000438801 THAP3Q8WTV1 239 aaPredicted RBP4.43□□□□□ -1.7
HMGB1P18-201ENST00000438801 NEU4Q8WWR8 484 aaPredicted RBP4.43□□□□□ -1.7
HMGB1P18-201ENST00000438801 RABGGTAQ92696 567 aa4.43□□□□□ -1.7
HMGB1P18-201ENST00000438801 SRPK1Q96SB4 655 aaKnown RBP4.43□□□□□ -1.7
HMGB1P18-201ENST00000438801 CEP89Q96ST8 783 aa4.43□□□□□ -1.7
HMGB1P18-201ENST00000438801 MPHOSPH9Q99550 1183 aa4.43□□□□□ -1.7
HMGB1P18-201ENST00000438801 FOXB1Q99853 325 aa4.43□□□□□ -1.7
HMGB1P18-201ENST00000438801 BOCQ9BWV1 1114 aa4.43□□□□□ -1.7
HMGB1P18-201ENST00000438801 IKZF4Q9H2S9 585 aa4.43□□□□□ -1.7
HMGB1P18-201ENST00000438801 MMRN2Q9H8L6 949 aa4.43□□□□□ -1.7
HMGB1P18-201ENST00000438801 CEP72Q9P209 647 aa4.43□□□□□ -1.7
HMGB1P18-201ENST00000438801 C11orf21Q9P2W6 132 aa4.43□□□□□ -1.7
HMGB1P18-201ENST00000438801 VWDEQ8N2E2 1590 aa4.43□□□□□ -1.7
HMGB1P18-201ENST00000438801 WDR7Q9Y4E6 1490 aa4.43□□□□□ -1.7
HMGB1P18-201ENST00000438801 H2AFYO75367 372 aaKnown RBP4.42□□□□□ -1.7
HMGB1P18-201ENST00000438801 ADH4P08319 380 aa4.42□□□□□ -1.7
HMGB1P18-201ENST00000438801 MAKP20794 623 aa4.42□□□□□ -1.7
HMGB1P18-201ENST00000438801 ADCY7P51828 1080 aa4.42□□□□□ -1.7
HMGB1P18-201ENST00000438801 BLMP54132 1417 aaPredicted RBP4.42□□□□□ -1.7
HMGB1P18-201ENST00000438801 SESN2P58004 480 aaPredicted RBP4.42□□□□□ -1.7
HMGB1P18-201ENST00000438801 RRP1BQ14684 758 aaKnown RBP4.42□□□□□ -1.7
HMGB1P18-201ENST00000438801 SMN1Q16637 294 aaKnown RBP4.42□□□□□ -1.7
HMGB1P18-201ENST00000438801 OTOP1Q7RTM1 612 aa4.42□□□□□ -1.7
HMGB1P18-201ENST00000438801 ZNF483Q8TF39 744 aaPredicted RBP4.42□□□□□ -1.7
HMGB1P18-201ENST00000438801 MKL1Q969V6 931 aa4.42□□□□□ -1.7
HMGB1P18-201ENST00000438801 E2F7Q96AV8 911 aa4.42□□□□□ -1.7
HMGB1P18-201ENST00000438801 SHANK3Q9BYB0 1731 aa4.42□□□□□ -1.7
HMGB1P18-201ENST00000438801 SLC6A15Q9H2J7 730 aa4.42□□□□□ -1.7
HMGB1P18-201ENST00000438801 TRIM39Q9HCM9 518 aa4.42□□□□□ -1.7
HMGB1P18-201ENST00000438801 PARPBPQ9NWS1 579 aa4.42□□□□□ -1.7
HMGB1P18-201ENST00000438801 SAE1Q9UBE0 346 aaPredicted RBP4.42□□□□□ -1.7
HMGB1P18-201ENST00000438801 MAGEL2Q9UJ55 1249 aa4.42□□□□□ -1.7
HMGB1P18-201ENST00000438801 SH3BP1Q9Y3L3 701 aa4.42□□□□□ -1.7
HMGB1P18-201ENST00000438801 JCADQ9P266 1359 aa4.41□□□□□ -1.7
HMGB1P18-201ENST00000438801 KRT37O76014 449 aa4.41□□□□□ -1.7
HMGB1P18-201ENST00000438801 HSPA1AP0DMV8 641 aaKnown RBP4.41□□□□□ -1.7
HMGB1P18-201ENST00000438801 HSPA1BP0DMV9 641 aaKnown RBP4.41□□□□□ -1.7
HMGB1P18-201ENST00000438801 FNTBP49356 437 aa4.41□□□□□ -1.7
HMGB1P18-201ENST00000438801 RGS19P49795 217 aa4.41□□□□□ -1.7
HMGB1P18-201ENST00000438801 RGS3P49796 1198 aa4.41□□□□□ -1.7
HMGB1P18-201ENST00000438801 KIF11P52732 1056 aa4.41□□□□□ -1.7
HMGB1P18-201ENST00000438801 INHBCP55103 352 aa4.41□□□□□ -1.7
HMGB1P18-201ENST00000438801 CRHR2Q13324 411 aa4.41□□□□□ -1.7
HMGB1P18-201ENST00000438801 ACAP1Q15027 740 aa4.41□□□□□ -1.7
HMGB1P18-201ENST00000438801 ARHGAP44Q17R89 818 aa4.41□□□□□ -1.7
HMGB1P18-201ENST00000438801 ANKRD35Q8N283 1001 aa4.41□□□□□ -1.7
HMGB1P18-201ENST00000438801 GFM2Q969S9 779 aaKnown RBP4.41□□□□□ -1.7
HMGB1P18-201ENST00000438801 SLC7A6OSQ96CW6 309 aaPredicted RBP4.41□□□□□ -1.7
HMGB1P18-201ENST00000438801 C8orf37Q96NL8 207 aa4.41□□□□□ -1.7
HMGB1P18-201ENST00000438801 DENND2AQ9ULE3 1009 aa4.41□□□□□ -1.7
HMGB1P18-201ENST00000438801 CFTRP13569 1480 aa4.41□□□□□ -1.7
HMGB1P18-201ENST00000438801 AFF2P51816 1311 aa4.41□□□□□ -1.7
HMGB1P18-201ENST00000438801 A0A087X1B8 175 aa4.4□□□□□ -1.71
HMGB1P18-201ENST00000438801 FAM83GA6ND36 823 aa4.4□□□□□ -1.71
HMGB1P18-201ENST00000438801 M0R2C6 588 aa4.4□□□□□ -1.71
HMGB1P18-201ENST00000438801 PRLP01236 227 aa4.4□□□□□ -1.71
HMGB1P18-201ENST00000438801 MECP2P51608 486 aaKnown RBP4.4□□□□□ -1.71
HMGB1P18-201ENST00000438801 INHBEP58166 350 aa4.4□□□□□ -1.71
HMGB1P18-201ENST00000438801 ANTXR2P58335 489 aa4.4□□□□□ -1.71
HMGB1P18-201ENST00000438801 SLC6A3Q01959 620 aa4.4□□□□□ -1.71
HMGB1P18-201ENST00000438801 ROM1Q03395 351 aa4.4□□□□□ -1.71
HMGB1P18-201ENST00000438801 DGKDQ16760 1214 aa4.4□□□□□ -1.71
HMGB1P18-201ENST00000438801 C2orf27AQ580R0 203 aa4.4□□□□□ -1.71
HMGB1P18-201ENST00000438801 DDX53Q86TM3 631 aaKnown RBP4.4□□□□□ -1.71
HMGB1P18-201ENST00000438801 ANKRD53Q8N9V6 530 aa4.4□□□□□ -1.71
HMGB1P18-201ENST00000438801 OR5AN1Q8NGI8 311 aa4.4□□□□□ -1.71
HMGB1P18-201ENST00000438801 LARP4BQ92615 738 aaKnown RBP4.4□□□□□ -1.71
HMGB1P18-201ENST00000438801 GCDHQ92947 438 aaPredicted RBP4.4□□□□□ -1.71
HMGB1P18-201ENST00000438801 CLIP3Q96DZ5 547 aa4.4□□□□□ -1.71
HMGB1P18-201ENST00000438801 MAML3Q96JK9 1138 aa4.4□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms