RNA–Protein interactions for RNA: ENST00000438571.5

GTF3A-204, Transcript of general transcription factor IIIA, humanhuman

TSL 5

Gene GTF3A, Length 792 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-204ENST00000438571 ZNF558Q96NG5 402 aa20.43■□□□□ 0.86
GTF3A-204ENST00000438571 TM6SF1Q9BZW5 370 aa20.43■□□□□ 0.86
GTF3A-204ENST00000438571 ENTPD7Q9NQZ7 604 aa20.43■□□□□ 0.86
GTF3A-204ENST00000438571 DDX25Q9UHL0 483 aaKnown RBP20.43■□□□□ 0.86
GTF3A-204ENST00000438571 MEIS3P2A8K0S8 358 aa20.42■□□□□ 0.86
GTF3A-204ENST00000438571 NT5C1B-RDH14C9J2C7 533 aa20.42■□□□□ 0.86
GTF3A-204ENST00000438571 HOXA2O43364 376 aa20.42■□□□□ 0.86
GTF3A-204ENST00000438571 LETM2Q2VYF4 491 aa20.42■□□□□ 0.86
GTF3A-204ENST00000438571 LONRF3Q496Y0 759 aa20.42■□□□□ 0.86
GTF3A-204ENST00000438571 XKR3Q5GH77 459 aa20.42■□□□□ 0.86
GTF3A-204ENST00000438571 MOXD1Q6UVY6 613 aa20.42■□□□□ 0.86
GTF3A-204ENST00000438571 ANO5Q75V66 913 aa20.42■□□□□ 0.86
GTF3A-204ENST00000438571 SLC39A11Q8N1S5 342 aa20.42■□□□□ 0.86
GTF3A-204ENST00000438571 ZNF579Q8NAF0 562 aaKnown RBP20.42■□□□□ 0.86
GTF3A-204ENST00000438571 SUSD6Q92537 303 aa20.42■□□□□ 0.86
GTF3A-204ENST00000438571 LPPQ93052 612 aa20.42■□□□□ 0.86
GTF3A-204ENST00000438571 C22orf23Q9BZE7 217 aa20.42■□□□□ 0.86
GTF3A-204ENST00000438571 PDRG1Q9NUG6 133 aa20.42■□□□□ 0.86
GTF3A-204ENST00000438571 WRAP73Q9P2S5 460 aaPredicted RBP20.42■□□□□ 0.86
GTF3A-204ENST00000438571 VAV3Q9UKW4 847 aa20.42■□□□□ 0.86
GTF3A-204ENST00000438571 LZTS1Q9Y250 596 aa20.42■□□□□ 0.86
GTF3A-204ENST00000438571 A0A0U1RQF3 1178 aa20.41■□□□□ 0.86
GTF3A-204ENST00000438571 TECP42680 631 aa20.41■□□□□ 0.86
GTF3A-204ENST00000438571 NPEPPSP55786 919 aa20.41■□□□□ 0.86
GTF3A-204ENST00000438571 SYCE2Q6PIF2 218 aa20.41■□□□□ 0.86
GTF3A-204ENST00000438571 TMEM173Q86WV6 379 aaPredicted RBP20.41■□□□□ 0.86
GTF3A-204ENST00000438571 OXER1Q8TDS5 423 aa20.41■□□□□ 0.86
GTF3A-204ENST00000438571 RPGRIP1Q96KN7 1286 aa20.41■□□□□ 0.86
GTF3A-204ENST00000438571 CDCA3Q99618 268 aaPredicted RBP20.41■□□□□ 0.86
GTF3A-204ENST00000438571 PHF20Q9BVI0 1012 aa20.41■□□□□ 0.86
GTF3A-204ENST00000438571 BMP2KQ9NSY1 1161 aaPredicted RBP20.41■□□□□ 0.86
GTF3A-204ENST00000438571 FAM205CA6NFA0 338 aa20.4■□□□□ 0.86
GTF3A-204ENST00000438571 DDX11L8A8MPP1 907 aa20.4■□□□□ 0.86
GTF3A-204ENST00000438571 EPB41L2O43491 1005 aaKnown RBP20.4■□□□□ 0.86
GTF3A-204ENST00000438571 SP100P23497 879 aaPredicted RBP20.4■□□□□ 0.86
GTF3A-204ENST00000438571 CBX2Q14781 532 aaPredicted RBP20.4■□□□□ 0.86
GTF3A-204ENST00000438571 EARS2Q5JPH6 523 aaKnown RBP20.4■□□□□ 0.86
GTF3A-204ENST00000438571 ANKRD54Q6NXT1 300 aa20.4■□□□□ 0.86
GTF3A-204ENST00000438571 RHPN2Q8IUC4 686 aa20.4■□□□□ 0.86
GTF3A-204ENST00000438571 NLRP4Q96MN2 994 aa20.4■□□□□ 0.86
GTF3A-204ENST00000438571 PHF7Q9BWX1 381 aaPredicted RBP20.4■□□□□ 0.86
GTF3A-204ENST00000438571 GCOM2Q9BZD3 368 aaPredicted RBP20.4■□□□□ 0.86
GTF3A-204ENST00000438571 S1PR5Q9H228 398 aa20.4■□□□□ 0.86
GTF3A-204ENST00000438571 SUCLA2Q9P2R7 463 aaPredicted RBP20.4■□□□□ 0.86
GTF3A-204ENST00000438571 MAFO75444 373 aaPredicted RBP20.39■□□□□ 0.85
GTF3A-204ENST00000438571 PHKA2P46019 1235 aa20.39■□□□□ 0.85
GTF3A-204ENST00000438571 PDE12Q6L8Q7 609 aaKnown RBP20.39■□□□□ 0.85
GTF3A-204ENST00000438571 KRT25Q7Z3Z0 450 aa20.39■□□□□ 0.85
GTF3A-204ENST00000438571 TMC7Q7Z402 723 aa20.39■□□□□ 0.85
GTF3A-204ENST00000438571 FEZF2Q8TBJ5 459 aa20.39■□□□□ 0.85
GTF3A-204ENST00000438571 BCL7CQ8WUZ0 217 aaPredicted RBP20.39■□□□□ 0.85
GTF3A-204ENST00000438571 EDAQ92838 391 aa20.39■□□□□ 0.85
GTF3A-204ENST00000438571 FBXL18Q96ME1 805 aa20.39■□□□□ 0.85
GTF3A-204ENST00000438571 KCNMB3Q9NPA1 279 aa20.39■□□□□ 0.85
GTF3A-204ENST00000438571 SPG21Q9NZD8 308 aa20.39■□□□□ 0.85
GTF3A-204ENST00000438571 TPCN1Q9ULQ1 816 aa20.39■□□□□ 0.85
GTF3A-204ENST00000438571 PIN4Q9Y237 131 aaKnown RBP20.39■□□□□ 0.85
GTF3A-204ENST00000438571 B4GALT3O60512 393 aa20.38■□□□□ 0.85
GTF3A-204ENST00000438571 CTDNEP1O95476 244 aa20.38■□□□□ 0.85
GTF3A-204ENST00000438571 PPM1AP35813 382 aa20.38■□□□□ 0.85
GTF3A-204ENST00000438571 BCAR1P56945 870 aa20.38■□□□□ 0.85
GTF3A-204ENST00000438571 PSMC5P62195 406 aa20.38■□□□□ 0.85
GTF3A-204ENST00000438571 PPP2R5CQ13362 524 aa20.38■□□□□ 0.85
GTF3A-204ENST00000438571 TWF2Q6IBS0 349 aaKnown RBP20.38■□□□□ 0.85
GTF3A-204ENST00000438571 CPLX2Q6PUV4 134 aaKnown RBP20.38■□□□□ 0.85
GTF3A-204ENST00000438571 TMEM184AQ6ZMB5 413 aa20.38■□□□□ 0.85
GTF3A-204ENST00000438571 ZNF710Q8N1W2 664 aa20.38■□□□□ 0.85
GTF3A-204ENST00000438571 AUTS2Q8WXX7 1259 aa20.38■□□□□ 0.85
GTF3A-204ENST00000438571 HAS1Q92839 578 aa20.38■□□□□ 0.85
GTF3A-204ENST00000438571 DACT1Q9NYF0 836 aa20.38■□□□□ 0.85
GTF3A-204ENST00000438571 PUF60Q9UHX1 559 aaKnown RBP20.38■□□□□ 0.85
GTF3A-204ENST00000438571 ZDBF2Q9HCK1 2354 aa20.37■□□□□ 0.85
GTF3A-204ENST00000438571 STK36Q9NRP7 1315 aa20.37■□□□□ 0.85
GTF3A-204ENST00000438571 C2orf71A6NGG8 1288 aa20.37■□□□□ 0.85
GTF3A-204ENST00000438571 EOMESO95936 686 aa20.37■□□□□ 0.85
GTF3A-204ENST00000438571 GALNT17Q6IS24 598 aa20.37■□□□□ 0.85
GTF3A-204ENST00000438571 PIK3AP1Q6ZUJ8 805 aa20.37■□□□□ 0.85
GTF3A-204ENST00000438571 NEK8Q86SG6 692 aa20.37■□□□□ 0.85
GTF3A-204ENST00000438571 NGRNQ9NPE2 291 aaKnown RBP20.37■□□□□ 0.85
GTF3A-204ENST00000438571 CYP26B1Q9NR63 512 aa20.37■□□□□ 0.85
GTF3A-204ENST00000438571 FAM105AQ9NUU6 356 aa20.37■□□□□ 0.85
GTF3A-204ENST00000438571 INPP5FQ9Y2H2 1132 aa20.37■□□□□ 0.85
GTF3A-204ENST00000438571 HCFC2Q9Y5Z7 792 aa20.37■□□□□ 0.85
GTF3A-204ENST00000438571 MTCL1Q9Y4B5 1905 aaKnown RBP20.36■□□□□ 0.85
GTF3A-204ENST00000438571 CCDC194A0A1B0GVG4 234 aa20.36■□□□□ 0.85
GTF3A-204ENST00000438571 ZC3H11AO75152 810 aaKnown RBP eCLIP20.36■□□□□ 0.85
GTF3A-204ENST00000438571 LARGE1O95461 756 aa20.36■□□□□ 0.85
GTF3A-204ENST00000438571 SFPQP23246 707 aaKnown RBP eCLIP20.36■□□□□ 0.85
GTF3A-204ENST00000438571 CA8P35219 290 aa20.36■□□□□ 0.85
GTF3A-204ENST00000438571 KRT17Q04695 432 aa20.36■□□□□ 0.85
GTF3A-204ENST00000438571 ALYREFQ86V81 257 aaKnown RBP20.36■□□□□ 0.85
GTF3A-204ENST00000438571 ZNF410Q86VK4 478 aa20.36■□□□□ 0.85
GTF3A-204ENST00000438571 TMEM143Q96AN5 459 aa20.36■□□□□ 0.85
GTF3A-204ENST00000438571 SLKQ9H2G2 1235 aaPredicted RBP20.36■□□□□ 0.85
GTF3A-204ENST00000438571 NRDE2Q9H7Z3 1164 aa20.36■□□□□ 0.85
GTF3A-204ENST00000438571 MINDY3Q9H8M7 445 aa20.36■□□□□ 0.85
GTF3A-204ENST00000438571 IFT122Q9HBG6 1241 aa20.36■□□□□ 0.85
GTF3A-204ENST00000438571 CHST12Q9NRB3 414 aa20.36■□□□□ 0.85
GTF3A-204ENST00000438571 TBC1D13Q9NVG8 400 aa20.36■□□□□ 0.85
GTF3A-204ENST00000438571 TMEM221A6NGB7 291 aa20.35■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms