RNA–Protein interactions for RNA: ENST00000437340.5

CPNE1-216, Transcript of copine 1, humanhuman

TSL 1 (best)

Gene CPNE1, Length 1,755 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-216ENST00000437340 TRAPPC11Q7Z392 1133 aa28.06■■■□□ 2.08
CPNE1-216ENST00000437340 SPIRE2Q8WWL2 714 aa28.06■■■□□ 2.08
CPNE1-216ENST00000437340 CEP170P1Q96L14 293 aa28.06■■■□□ 2.08
CPNE1-216ENST00000437340 SH2D3AQ9BRG2 576 aa28.06■■■□□ 2.08
CPNE1-216ENST00000437340 NTPCRQ9BSD7 190 aaKnown RBP28.06■■■□□ 2.08
CPNE1-216ENST00000437340 EXOC7Q9UPT5 735 aa28.06■■■□□ 2.08
CPNE1-216ENST00000437340 FHOD1Q9Y613 1164 aa28.06■■■□□ 2.08
CPNE1-216ENST00000437340 H2AFXP16104 143 aaPredicted RBP28.06■■■□□ 2.08
CPNE1-216ENST00000437340 ANXA13P27216 316 aa28.06■■■□□ 2.08
CPNE1-216ENST00000437340 GFPT1Q06210 699 aaPredicted RBP28.06■■■□□ 2.08
CPNE1-216ENST00000437340 SLC18A3Q16572 532 aa28.06■■■□□ 2.08
CPNE1-216ENST00000437340 INTS8Q75QN2 995 aaKnown RBP28.06■■■□□ 2.08
CPNE1-216ENST00000437340 GPR161Q8N6U8 529 aaKnown RBP28.06■■■□□ 2.08
CPNE1-216ENST00000437340 FAM133AQ8N9E0 248 aa28.06■■■□□ 2.08
CPNE1-216ENST00000437340 MCPH1Q8NEM0 835 aa28.06■■■□□ 2.08
CPNE1-216ENST00000437340 RABGGTAQ92696 567 aa28.06■■■□□ 2.08
CPNE1-216ENST00000437340 GPRC5CQ9NQ84 441 aa28.06■■■□□ 2.08
CPNE1-216ENST00000437340 DGAT1O75907 488 aa28.05■■■□□ 2.08
CPNE1-216ENST00000437340 RTP1P59025 263 aa28.05■■■□□ 2.08
CPNE1-216ENST00000437340 CHMP4BP1P59074 171 aa28.05■■■□□ 2.08
CPNE1-216ENST00000437340 CNTN2Q02246 1040 aa28.05■■■□□ 2.08
CPNE1-216ENST00000437340 DMP1Q13316 513 aaPredicted RBP28.05■■■□□ 2.08
CPNE1-216ENST00000437340 MOGSQ13724 837 aa28.05■■■□□ 2.08
CPNE1-216ENST00000437340 CST9Q5W186 159 aa28.05■■■□□ 2.08
CPNE1-216ENST00000437340 CCDC60Q8IWA6 550 aaPredicted RBP28.05■■■□□ 2.08
CPNE1-216ENST00000437340 C2orf69Q8N8R5 385 aa28.05■■■□□ 2.08
CPNE1-216ENST00000437340 AGTPBP1Q9UPW5 1226 aa28.05■■■□□ 2.08
CPNE1-216ENST00000437340 DUSP10Q9Y6W6 482 aa28.05■■■□□ 2.08
CPNE1-216ENST00000437340 TACC1O75410 805 aa28.04■■■□□ 2.08
CPNE1-216ENST00000437340 SUPT20HL2P0C7V6 817 aa28.04■■■□□ 2.08
CPNE1-216ENST00000437340 KRT13P13646 458 aa28.04■■■□□ 2.08
CPNE1-216ENST00000437340 EDNRBP24530 442 aa28.04■■■□□ 2.08
CPNE1-216ENST00000437340 PRKCIP41743 596 aa28.04■■■□□ 2.08
CPNE1-216ENST00000437340 JAM2P57087 298 aa28.04■■■□□ 2.08
CPNE1-216ENST00000437340 FBXO38Q6PIJ6 1188 aa28.04■■■□□ 2.08
CPNE1-216ENST00000437340 DHX30Q7L2E3 1194 aaKnown RBP eCLIP28.04■■■□□ 2.083e-8■□□□□ 9.3
CPNE1-216ENST00000437340 IRF2BP2Q7Z5L9 587 aa28.04■■■□□ 2.08
CPNE1-216ENST00000437340 ASCC2Q9H1I8 757 aaPredicted RBP28.04■■■□□ 2.08
CPNE1-216ENST00000437340 PDLIM7Q9NR12 457 aa28.04■■■□□ 2.08
CPNE1-216ENST00000437340 IGSF9BQ9UPX0 1349 aa28.04■■■□□ 2.08
CPNE1-216ENST00000437340 MACROD2A1Z1Q3 448 aa28.04■■■□□ 2.08
CPNE1-216ENST00000437340 SLC16A4O15374 487 aa28.04■■■□□ 2.08
CPNE1-216ENST00000437340 ATG7O95352 703 aa28.04■■■□□ 2.08
CPNE1-216ENST00000437340 COPB2P35606 906 aa28.04■■■□□ 2.08
CPNE1-216ENST00000437340 XKR3Q5GH77 459 aa28.04■■■□□ 2.08
CPNE1-216ENST00000437340 TMEM161BQ8NDZ6 487 aa28.04■■■□□ 2.08
CPNE1-216ENST00000437340 POTEB2H3BUK9 544 aa28.03■■■□□ 2.08
CPNE1-216ENST00000437340 SLC25A27O95847 323 aa28.03■■■□□ 2.08
CPNE1-216ENST00000437340 NPTX2P47972 431 aa28.03■■■□□ 2.08
CPNE1-216ENST00000437340 MCCD1P59942 119 aaPredicted RBP28.03■■■□□ 2.08
CPNE1-216ENST00000437340 PRKCEQ02156 737 aa28.03■■■□□ 2.08
CPNE1-216ENST00000437340 MAP4K3Q8IVH8 894 aa28.03■■■□□ 2.08
CPNE1-216ENST00000437340 RNF10Q8N5U6 811 aaKnown RBP28.03■■■□□ 2.08
CPNE1-216ENST00000437340 XXYLT1Q8NBI6 393 aa28.03■■■□□ 2.08
CPNE1-216ENST00000437340 KCNG1Q9UIX4 513 aa28.03■■■□□ 2.08
CPNE1-216ENST00000437340 SP2Q02086 613 aa28.02■■■□□ 2.08
CPNE1-216ENST00000437340 C10orf76Q5T2E6 689 aa28.02■■■□□ 2.08
CPNE1-216ENST00000437340 NCAPG2Q86XI2 1143 aa28.02■■■□□ 2.08
CPNE1-216ENST00000437340 FMNL3Q8IVF7 1028 aa28.02■■■□□ 2.08
CPNE1-216ENST00000437340 CYP26B1Q9NR63 512 aa28.02■■■□□ 2.08
CPNE1-216ENST00000437340 TBX20Q9UMR3 447 aa28.02■■■□□ 2.08
CPNE1-216ENST00000437340 JRKLQ9Y4A0 524 aa28.02■■■□□ 2.08
CPNE1-216ENST00000437340 SAR1BQ9Y6B6 198 aa28.02■■■□□ 2.08
CPNE1-216ENST00000437340 WDR81Q562E7 1941 aa28.02■■■□□ 2.08
CPNE1-216ENST00000437340 P4HA2O15460 535 aa28.01■■■□□ 2.08
CPNE1-216ENST00000437340 ABCD1P33897 745 aa28.01■■■□□ 2.08
CPNE1-216ENST00000437340 TEX35Q5T0J7 233 aa28.01■■■□□ 2.08
CPNE1-216ENST00000437340 TRMT1LQ7Z2T5 733 aaKnown RBP28.01■■■□□ 2.08
CPNE1-216ENST00000437340 ARGLU1Q9NWB6 273 aaPredicted RBP28.01■■■□□ 2.08
CPNE1-216ENST00000437340 HSPBP1Q9NZL4 362 aa28.01■■■□□ 2.08
CPNE1-216ENST00000437340 CCDC169A6NNP5 214 aa28.01■■■□□ 2.07
CPNE1-216ENST00000437340 N4BP1O75113 896 aaKnown RBP28.01■■■□□ 2.07
CPNE1-216ENST00000437340 CNMDO75829 334 aa28.01■■■□□ 2.07
CPNE1-216ENST00000437340 ATP1A1P05023 1023 aaKnown RBP28.01■■■□□ 2.07
CPNE1-216ENST00000437340 ARID5AQ03989 594 aa28.01■■■□□ 2.07
CPNE1-216ENST00000437340 SNAPC2Q13487 334 aa28.01■■■□□ 2.07
CPNE1-216ENST00000437340 CBWD6Q4V339 395 aa28.01■■■□□ 2.07
CPNE1-216ENST00000437340 CBWD3Q5JTY5 395 aa28.01■■■□□ 2.07
CPNE1-216ENST00000437340 CBWD5Q5RIA9 395 aa28.01■■■□□ 2.07
CPNE1-216ENST00000437340 FASTKD5Q7L8L6 764 aaKnown RBP28.01■■■□□ 2.07
CPNE1-216ENST00000437340 ALS2CR12Q96Q35 445 aa28.01■■■□□ 2.07
CPNE1-216ENST00000437340 CBWD1Q9BRT8 395 aa28.01■■■□□ 2.07
CPNE1-216ENST00000437340 CCDC94Q9BW85 323 aaPredicted RBP28.01■■■□□ 2.07
CPNE1-216ENST00000437340 ATP6V0A4Q9HBG4 840 aa28.01■■■□□ 2.07
CPNE1-216ENST00000437340 KMT5AQ9NQR1 393 aa28.01■■■□□ 2.07
CPNE1-216ENST00000437340 MAFBQ9Y5Q3 323 aaPredicted RBP28.01■■■□□ 2.07
CPNE1-216ENST00000437340 RFX1P22670 979 aa28■■■□□ 2.07
CPNE1-216ENST00000437340 MYL7Q01449 175 aa28■■■□□ 2.07
CPNE1-216ENST00000437340 IQCEQ6IPM2 695 aa28■■■□□ 2.07
CPNE1-216ENST00000437340 CYFIP1Q7L576 1253 aa28■■■□□ 2.07
CPNE1-216ENST00000437340 GPIHBP1Q8IV16 184 aa28■■■□□ 2.07
CPNE1-216ENST00000437340 STK33Q9BYT3 514 aa28■■■□□ 2.07
CPNE1-216ENST00000437340 SEPT9Q9UHD8 586 aaPredicted RBP28■■■□□ 2.07
CPNE1-216ENST00000437340 SYNGAP1Q96PV0 1343 aa27.99■■■□□ 2.07
CPNE1-216ENST00000437340 CTAGE15A4D2H0 777 aa27.99■■■□□ 2.07
CPNE1-216ENST00000437340 H0YCG3 227 aa27.99■■■□□ 2.07
CPNE1-216ENST00000437340 CTAGE8P0CG41 777 aa27.99■■■□□ 2.07
CPNE1-216ENST00000437340 TRIM49P0CI25 452 aa27.99■■■□□ 2.07
CPNE1-216ENST00000437340 TRIM49CP0CI26 452 aa27.99■■■□□ 2.07
CPNE1-216ENST00000437340 FERP16591 822 aa27.99■■■□□ 2.07
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms