RNA–Protein interactions for RNA: ENST00000437201.5

SBDSP1-203, Transcript of SBDS, ribosome maturation factor pseudogene 1, humanhuman

TSL 1 (best)

Gene SBDSP1, Length 839 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SBDSP1-203ENST00000437201 SPIRE1Q08AE8 756 aa19.61■□□□□ 0.73
SBDSP1-203ENST00000437201 CAMK1Q14012 370 aa19.61■□□□□ 0.73
SBDSP1-203ENST00000437201 TPH2Q8IWU9 490 aa19.61■□□□□ 0.73
SBDSP1-203ENST00000437201 COLGALT1Q8NBJ5 622 aa19.61■□□□□ 0.73
SBDSP1-203ENST00000437201 RNF169Q8NCN4 708 aa19.61■□□□□ 0.73
SBDSP1-203ENST00000437201 DYDC2Q96IM9 177 aa19.61■□□□□ 0.73
SBDSP1-203ENST00000437201 NLRP4Q96MN2 994 aa19.61■□□□□ 0.73
SBDSP1-203ENST00000437201 CASD1Q96PB1 797 aa19.61■□□□□ 0.73
SBDSP1-203ENST00000437201 TRAIPQ9BWF2 469 aa19.61■□□□□ 0.73
SBDSP1-203ENST00000437201 MRPL9Q9BYD2 267 aaKnown RBP19.61■□□□□ 0.73
SBDSP1-203ENST00000437201 IGFLR1Q9H665 355 aa19.61■□□□□ 0.73
SBDSP1-203ENST00000437201 DHX33Q9H6R0 707 aaKnown RBP19.61■□□□□ 0.73
SBDSP1-203ENST00000437201 TTC12Q9H892 705 aaPredicted RBP19.61■□□□□ 0.73
SBDSP1-203ENST00000437201 SH2B1Q9NRF2 756 aaPredicted RBP19.61■□□□□ 0.73
SBDSP1-203ENST00000437201 RGL1Q9NZL6 768 aa19.61■□□□□ 0.73
SBDSP1-203ENST00000437201 COL4A3BPQ9Y5P4 624 aa19.61■□□□□ 0.73
SBDSP1-203ENST00000437201 BDP1A6H8Y1 2624 aa19.6■□□□□ 0.73
SBDSP1-203ENST00000437201 NCOR1O75376 2440 aa19.6■□□□□ 0.73
SBDSP1-203ENST00000437201 FGF18O76093 207 aa19.6■□□□□ 0.73
SBDSP1-203ENST00000437201 CSPG5O95196 566 aa19.6■□□□□ 0.73
SBDSP1-203ENST00000437201 FGFR4P22455 802 aa19.6■□□□□ 0.73
SBDSP1-203ENST00000437201 DNAJB1P25685 340 aa19.6■□□□□ 0.73
SBDSP1-203ENST00000437201 PPM1AP35813 382 aa19.6■□□□□ 0.73
SBDSP1-203ENST00000437201 RAB27AP51159 221 aa19.6■□□□□ 0.73
SBDSP1-203ENST00000437201 HMGN5P82970 282 aaKnown RBP19.6■□□□□ 0.73
SBDSP1-203ENST00000437201 XKR9Q5GH70 373 aa19.6■□□□□ 0.73
SBDSP1-203ENST00000437201 TWF2Q6IBS0 349 aaKnown RBP19.6■□□□□ 0.73
SBDSP1-203ENST00000437201 CATSPER4Q7RTX7 472 aa19.6■□□□□ 0.73
SBDSP1-203ENST00000437201 FAM178BQ8IXR5 827 aa19.6■□□□□ 0.73
SBDSP1-203ENST00000437201 C8orf76Q96K31 380 aa19.6■□□□□ 0.73
SBDSP1-203ENST00000437201 CWH43Q9H720 699 aa19.6■□□□□ 0.73
SBDSP1-203ENST00000437201 TLR9Q9NR96 1032 aa19.6■□□□□ 0.73
SBDSP1-203ENST00000437201 LZTS1Q9Y250 596 aa19.6■□□□□ 0.73
SBDSP1-203ENST00000437201 CSDE1O75534 798 aaKnown RBP19.59■□□□□ 0.73
SBDSP1-203ENST00000437201 SLITRK3O94933 977 aa19.59■□□□□ 0.73
SBDSP1-203ENST00000437201 FOSBP53539 338 aa19.59■□□□□ 0.73
SBDSP1-203ENST00000437201 PLCB3Q01970 1234 aa19.59■□□□□ 0.73
SBDSP1-203ENST00000437201 CYP4A11Q02928 519 aa19.59■□□□□ 0.73
SBDSP1-203ENST00000437201 KRT17Q04695 432 aa19.59■□□□□ 0.73
SBDSP1-203ENST00000437201 ADAM15Q13444 863 aa19.59■□□□□ 0.73
SBDSP1-203ENST00000437201 CTTNQ14247 550 aaKnown RBP19.59■□□□□ 0.73
SBDSP1-203ENST00000437201 SRGAP1Q7Z6B7 1085 aa19.59■□□□□ 0.73
SBDSP1-203ENST00000437201 CCDC83Q8IWF9 413 aa19.59■□□□□ 0.73
SBDSP1-203ENST00000437201 PRPF31Q8WWY3 499 aaKnown RBP19.59■□□□□ 0.73
SBDSP1-203ENST00000437201 CCDC43Q96MW1 224 aaKnown RBP19.59■□□□□ 0.73
SBDSP1-203ENST00000437201 ZNF558Q96NG5 402 aa19.59■□□□□ 0.73
SBDSP1-203ENST00000437201 EIF2AK1Q9BQI3 630 aaKnown RBP19.59■□□□□ 0.73
SBDSP1-203ENST00000437201 WRAP73Q9P2S5 460 aaPredicted RBP19.59■□□□□ 0.73
SBDSP1-203ENST00000437201 PRKAG3Q9UGI9 489 aa19.59■□□□□ 0.73
SBDSP1-203ENST00000437201 PIN4Q9Y237 131 aaKnown RBP19.59■□□□□ 0.73
SBDSP1-203ENST00000437201 LYPLA2O95372 231 aa19.58■□□□□ 0.72
SBDSP1-203ENST00000437201 IL9P15248 144 aa19.58■□□□□ 0.72
SBDSP1-203ENST00000437201 LTBRP36941 435 aa19.58■□□□□ 0.72
SBDSP1-203ENST00000437201 TXKP42681 527 aa19.58■□□□□ 0.72
SBDSP1-203ENST00000437201 PHKA2P46019 1235 aa19.58■□□□□ 0.72
SBDSP1-203ENST00000437201 ORC2Q13416 577 aaPredicted RBP19.58■□□□□ 0.72
SBDSP1-203ENST00000437201 MXD4Q14582 209 aaPredicted RBP19.58■□□□□ 0.72
SBDSP1-203ENST00000437201 EMC2Q15006 297 aa19.58■□□□□ 0.72
SBDSP1-203ENST00000437201 PCBP1Q15365 356 aaKnown RBP eCLIP19.58■□□□□ 0.72
SBDSP1-203ENST00000437201 KCNT2Q6UVM3 1135 aa19.58■□□□□ 0.72
SBDSP1-203ENST00000437201 ZNF598Q86UK7 904 aaKnown RBP19.58■□□□□ 0.72
SBDSP1-203ENST00000437201 KSR1Q8IVT5 923 aa19.58■□□□□ 0.72
SBDSP1-203ENST00000437201 GJD3Q8N144 294 aa19.58■□□□□ 0.72
SBDSP1-203ENST00000437201 EFHBQ8N7U6 833 aa19.58■□□□□ 0.72
SBDSP1-203ENST00000437201 FAM184AQ8NB25 1140 aa19.58■□□□□ 0.72
SBDSP1-203ENST00000437201 TMEM143Q96AN5 459 aa19.58■□□□□ 0.72
SBDSP1-203ENST00000437201 CDCA3Q99618 268 aaPredicted RBP19.58■□□□□ 0.72
SBDSP1-203ENST00000437201 HSD17B14Q9BPX1 270 aa19.58■□□□□ 0.72
SBDSP1-203ENST00000437201 TLE6Q9H808 572 aa19.58■□□□□ 0.72
SBDSP1-203ENST00000437201 IFT122Q9HBG6 1241 aa19.58■□□□□ 0.72
SBDSP1-203ENST00000437201 ANKEF1Q9NU02 776 aa19.58■□□□□ 0.72
SBDSP1-203ENST00000437201 BRWD1Q9NSI6 2320 aa19.58■□□□□ 0.72
SBDSP1-203ENST00000437201 FNDC1Q4ZHG4 1894 aaPredicted RBP19.57■□□□□ 0.72
SBDSP1-203ENST00000437201 SRGAP2CP0DJJ0 459 aa19.57■□□□□ 0.72
SBDSP1-203ENST00000437201 SSTR3P32745 418 aaPredicted RBP19.57■□□□□ 0.72
SBDSP1-203ENST00000437201 IRS1P35568 1242 aa19.57■□□□□ 0.72
SBDSP1-203ENST00000437201 NDUFV1P49821 464 aa19.57■□□□□ 0.72
SBDSP1-203ENST00000437201 NCBP1Q09161 790 aaKnown RBP19.57■□□□□ 0.72
SBDSP1-203ENST00000437201 LAMTOR4Q0VGL1 99 aa19.57■□□□□ 0.72
SBDSP1-203ENST00000437201 GNL2Q13823 731 aaKnown RBP19.57■□□□□ 0.72
SBDSP1-203ENST00000437201 BMS1Q14692 1282 aaKnown RBP19.57■□□□□ 0.72
SBDSP1-203ENST00000437201 ZNF579Q8NAF0 562 aaKnown RBP19.57■□□□□ 0.72
SBDSP1-203ENST00000437201 HELQQ8TDG4 1101 aa19.57■□□□□ 0.72
SBDSP1-203ENST00000437201 MRPS27Q92552 414 aaKnown RBP19.57■□□□□ 0.72
SBDSP1-203ENST00000437201 PGBD4Q96DM1 585 aa19.57■□□□□ 0.72
SBDSP1-203ENST00000437201 MTMR9Q96QG7 549 aa19.57■□□□□ 0.72
SBDSP1-203ENST00000437201 MTRQ99707 1265 aa19.57■□□□□ 0.72
SBDSP1-203ENST00000437201 FOXP1Q9H334 677 aaPredicted RBP19.57■□□□□ 0.72
SBDSP1-203ENST00000437201 NGRNQ9NPE2 291 aaKnown RBP19.57■□□□□ 0.72
SBDSP1-203ENST00000437201 RNF19AQ9NV58 838 aa19.57■□□□□ 0.72
SBDSP1-203ENST00000437201 SPG21Q9NZD8 308 aa19.57■□□□□ 0.72
SBDSP1-203ENST00000437201 CD207Q9UJ71 328 aa19.57■□□□□ 0.72
SBDSP1-203ENST00000437201 ZNF623O75123 536 aa19.56■□□□□ 0.72
SBDSP1-203ENST00000437201 DGAT1O75907 488 aa19.56■□□□□ 0.72
SBDSP1-203ENST00000437201 XRCC6P12956 609 aaKnown RBP eCLIP19.56■□□□□ 0.72
SBDSP1-203ENST00000437201 NRIP1P48552 1158 aa19.56■□□□□ 0.72
SBDSP1-203ENST00000437201 ALDH7A1P49419 539 aaKnown RBP19.56■□□□□ 0.72
SBDSP1-203ENST00000437201 RBM25P49756 843 aaKnown RBP19.56■□□□□ 0.72
SBDSP1-203ENST00000437201 ST3GAL1Q11201 340 aa19.56■□□□□ 0.72
SBDSP1-203ENST00000437201 TFDP1Q14186 410 aa19.56■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms