RNA–Protein interactions for RNA: ENST00000435607.3

SCN4A-201, Transcript of sodium voltage-gated channel alpha subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN4A, Length 7,805 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4A-201ENST00000435607 GRIK1P39086 918 aa11.91□□□□□ -0.5
SCN4A-201ENST00000435607 CDK17Q00537 523 aa11.91□□□□□ -0.5
SCN4A-201ENST00000435607 KRT76Q01546 638 aa11.91□□□□□ -0.5
SCN4A-201ENST00000435607 TMED8Q6PL24 325 aaPredicted RBP11.91□□□□□ -0.5
SCN4A-201ENST00000435607 EMILIN3Q9NT22 766 aa11.91□□□□□ -0.5
SCN4A-201ENST00000435607 ASAP2O43150 1006 aa11.91□□□□□ -0.5
SCN4A-201ENST00000435607 SDC4P31431 198 aa11.91□□□□□ -0.5
SCN4A-201ENST00000435607 RWDD2BP57060 319 aa11.91□□□□□ -0.5
SCN4A-201ENST00000435607 PPP1R2P1Q96PQ5 205 aa11.91□□□□□ -0.5
SCN4A-201ENST00000435607 ACTR5Q9H9F9 607 aaPredicted RBP11.91□□□□□ -0.5
SCN4A-201ENST00000435607 NDE1Q9NXR1 346 aa11.91□□□□□ -0.5
SCN4A-201ENST00000435607 STXBP3O00186 592 aa11.91□□□□□ -0.5
SCN4A-201ENST00000435607 ANKS6Q68DC2 871 aa11.91□□□□□ -0.5
SCN4A-201ENST00000435607 BCAS4Q8TDM0 211 aa11.91□□□□□ -0.5
SCN4A-201ENST00000435607 MRFAP1L1Q96HT8 127 aa11.91□□□□□ -0.5
SCN4A-201ENST00000435607 H2AFY2Q9P0M6 372 aaPredicted RBP11.91□□□□□ -0.5
SCN4A-201ENST00000435607 ATP8A1Q9Y2Q0 1164 aa11.91□□□□□ -0.5
SCN4A-201ENST00000435607 NDUFB9Q9Y6M9 179 aa11.91□□□□□ -0.5
SCN4A-201ENST00000435607 GPATCH8Q9UKJ3 1502 aaKnown RBP11.91□□□□□ -0.5
SCN4A-201ENST00000435607 PSMC1P62191 440 aaKnown RBP11.91□□□□□ -0.5
SCN4A-201ENST00000435607 CCDC85BQ15834 202 aaPredicted RBP11.91□□□□□ -0.5
SCN4A-201ENST00000435607 SPACA6W5XKT8 324 aa11.91□□□□□ -0.5
SCN4A-201ENST00000435607 RSPH10B2B2RC85 870 aa11.91□□□□□ -0.5
SCN4A-201ENST00000435607 RSPH10BP0C881 870 aa11.91□□□□□ -0.5
SCN4A-201ENST00000435607 IMPDH2P12268 514 aa11.91□□□□□ -0.5
SCN4A-201ENST00000435607 MAP2K2P36507 400 aa11.91□□□□□ -0.5
SCN4A-201ENST00000435607 NUDCD3Q8IVD9 361 aa11.91□□□□□ -0.5
SCN4A-201ENST00000435607 HES6Q96HZ4 224 aa11.91□□□□□ -0.5
SCN4A-201ENST00000435607 PSMD3O43242 534 aa11.91□□□□□ -0.5
SCN4A-201ENST00000435607 ATP1A1P05023 1023 aaKnown RBP11.91□□□□□ -0.5
SCN4A-201ENST00000435607 ZNF658Q5TYW1 1059 aaPredicted RBP11.91□□□□□ -0.5
SCN4A-201ENST00000435607 HEATR6Q6AI08 1181 aaKnown RBP11.91□□□□□ -0.5
SCN4A-201ENST00000435607 KRT78Q8N1N4 520 aa11.91□□□□□ -0.5
SCN4A-201ENST00000435607 OR6P1Q8NGX9 317 aa11.91□□□□□ -0.5
SCN4A-201ENST00000435607 TMEM161AQ9NX61 479 aa11.91□□□□□ -0.5
SCN4A-201ENST00000435607 WARS2Q9UGM6 360 aaKnown RBP11.91□□□□□ -0.5
SCN4A-201ENST00000435607 AK9Q5TCS8 1911 aa11.9□□□□□ -0.5
SCN4A-201ENST00000435607 CHL1O00533 1208 aa11.9□□□□□ -0.5
SCN4A-201ENST00000435607 PODXLO00592 558 aa11.9□□□□□ -0.5
SCN4A-201ENST00000435607 PDIA3P30101 505 aaKnown RBP11.9□□□□□ -0.5
SCN4A-201ENST00000435607 EPHB4P54760 987 aa11.9□□□□□ -0.5
SCN4A-201ENST00000435607 POU5F1BQ06416 359 aa11.9□□□□□ -0.5
SCN4A-201ENST00000435607 TMEM132BQ14DG7 1078 aa11.9□□□□□ -0.5
SCN4A-201ENST00000435607 PPP1R14AQ96A00 147 aa11.9□□□□□ -0.5
SCN4A-201ENST00000435607 SPATA33Q96N06 139 aa11.9□□□□□ -0.5
SCN4A-201ENST00000435607 MAP10Q9P2G4 905 aa11.9□□□□□ -0.5
SCN4A-201ENST00000435607 PPP2R2CQ9Y2T4 447 aa11.9□□□□□ -0.5
SCN4A-201ENST00000435607 ATP10AO60312 1499 aa11.9□□□□□ -0.5
SCN4A-201ENST00000435607 USP17L10C9JJH3 530 aa11.9□□□□□ -0.5
SCN4A-201ENST00000435607 AKT1P31749 480 aa11.9□□□□□ -0.5
SCN4A-201ENST00000435607 SREBF2Q12772 1141 aa11.9□□□□□ -0.5
SCN4A-201ENST00000435607 C6orf118Q5T5N4 469 aa11.9□□□□□ -0.5
SCN4A-201ENST00000435607 RHPN2Q8IUC4 686 aa11.9□□□□□ -0.5
SCN4A-201ENST00000435607 GTF3C2Q8WUA4 911 aaPredicted RBP11.9□□□□□ -0.5
SCN4A-201ENST00000435607 GREM2Q9H772 168 aa11.9□□□□□ -0.5
SCN4A-201ENST00000435607 BTBD18B2RXH4 712 aa11.9□□□□□ -0.5
SCN4A-201ENST00000435607 DCTN3O75935 186 aa11.9□□□□□ -0.5
SCN4A-201ENST00000435607 MMP10P09238 476 aa11.9□□□□□ -0.5
SCN4A-201ENST00000435607 ABCE1P61221 599 aaKnown RBP11.9□□□□□ -0.5
SCN4A-201ENST00000435607 LRRC63Q05C16 580 aa11.9□□□□□ -0.5
SCN4A-201ENST00000435607 GRAPQ13588 217 aa11.9□□□□□ -0.5
SCN4A-201ENST00000435607 SNRNP48Q6IEG0 339 aaKnown RBP11.9□□□□□ -0.5
SCN4A-201ENST00000435607 ZNF438Q7Z4V0 828 aa11.9□□□□□ -0.5
SCN4A-201ENST00000435607 GRAPLQ8TC17 118 aaPredicted RBP11.9□□□□□ -0.5
SCN4A-201ENST00000435607 CACNA2D2Q9NY47 1150 aa11.9□□□□□ -0.5
SCN4A-201ENST00000435607 ADAM22Q9P0K1 906 aa11.9□□□□□ -0.5
SCN4A-201ENST00000435607 LRRC53A6NM62 1247 aa11.9□□□□□ -0.5
SCN4A-201ENST00000435607 C21orf2O43822 256 aa11.9□□□□□ -0.5
SCN4A-201ENST00000435607 ADD1P35611 737 aaKnown RBP11.9□□□□□ -0.5
SCN4A-201ENST00000435607 TP53BP2Q13625 1128 aa11.9□□□□□ -0.5
SCN4A-201ENST00000435607 ANO4Q32M45 955 aa11.9□□□□□ -0.5
SCN4A-201ENST00000435607 NEK9Q8TD19 979 aa11.9□□□□□ -0.5
SCN4A-201ENST00000435607 KIF24Q5T7B8 1368 aa11.9□□□□□ -0.5
SCN4A-201ENST00000435607 PPP6R2O75170 966 aa11.9□□□□□ -0.5
SCN4A-201ENST00000435607 TRPC1P48995 793 aa11.9□□□□□ -0.5
SCN4A-201ENST00000435607 KIRREL3Q8IZU9 778 aa11.9□□□□□ -0.5
SCN4A-201ENST00000435607 SSH2Q76I76 1423 aa11.9□□□□□ -0.5
SCN4A-201ENST00000435607 HNRNPRO43390 633 aaKnown RBP11.9□□□□□ -0.51
SCN4A-201ENST00000435607 TRADDQ15628 312 aa11.9□□□□□ -0.51
SCN4A-201ENST00000435607 CCDC157Q569K6 752 aa11.9□□□□□ -0.51
SCN4A-201ENST00000435607 TBC1D1Q86TI0 1168 aaPredicted RBP11.9□□□□□ -0.51
SCN4A-201ENST00000435607 FMO2Q99518 471 aa11.9□□□□□ -0.51
SCN4A-201ENST00000435607 MPP6Q9NZW5 540 aa11.9□□□□□ -0.51
SCN4A-201ENST00000435607 TBK1Q9UHD2 729 aa11.9□□□□□ -0.51
SCN4A-201ENST00000435607 HEY1Q9Y5J3 304 aa11.9□□□□□ -0.51
SCN4A-201ENST00000435607 CFAP99D6REC4 459 aa11.89□□□□□ -0.51
SCN4A-201ENST00000435607 PIK3R2O00459 728 aa11.89□□□□□ -0.51
SCN4A-201ENST00000435607 TBC1D12O60347 775 aa11.89□□□□□ -0.51
SCN4A-201ENST00000435607 TMPRSS15P98073 1019 aa11.89□□□□□ -0.51
SCN4A-201ENST00000435607 CAV1Q03135 178 aa11.89□□□□□ -0.51
SCN4A-201ENST00000435607 ADCY2Q08462 1091 aa11.89□□□□□ -0.51
SCN4A-201ENST00000435607 MAPRE2Q15555 327 aa11.89□□□□□ -0.51
SCN4A-201ENST00000435607 OR6J1Q8NGC5 347 aa11.89□□□□□ -0.51
SCN4A-201ENST00000435607 EVA1BQ9NVM1 165 aa11.89□□□□□ -0.51
SCN4A-201ENST00000435607 ADCY9O60503 1353 aa11.89□□□□□ -0.51
SCN4A-201ENST00000435607 MLH3Q9UHC1 1453 aa11.89□□□□□ -0.51
SCN4A-201ENST00000435607 HMOX2P30519 316 aa11.89□□□□□ -0.51
SCN4A-201ENST00000435607 AMPD2Q01433 879 aa11.89□□□□□ -0.51
SCN4A-201ENST00000435607 MTFR1Q15390 333 aa11.89□□□□□ -0.51
SCN4A-201ENST00000435607 ZNF556Q9HAH1 456 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms