RNA–Protein interactions for RNA: ENST00000434601.7

LINC00539-203, long intergenic non-protein coding RNA 539, humanhuman

TSL 5 BASIC

Gene LINC00539, Length 960 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00539-203ENST00000434601 OR6J1Q8NGC5 347 aa12.45□□□□□ -0.42
LINC00539-203ENST00000434601 PPTC7Q8NI37 304 aa12.45□□□□□ -0.42
LINC00539-203ENST00000434601 P2RX5Q93086 422 aa12.45□□□□□ -0.42
LINC00539-203ENST00000434601 TIFAQ96CG3 184 aa12.45□□□□□ -0.42
LINC00539-203ENST00000434601 DRC1Q96MC2 740 aa12.45□□□□□ -0.42
LINC00539-203ENST00000434601 BUD13Q9BRD0 619 aaKnown RBP eCLIP12.45□□□□□ -0.42
LINC00539-203ENST00000434601 AP5M1Q9H0R1 490 aa12.45□□□□□ -0.42
LINC00539-203ENST00000434601 MTIF3Q9H2K0 278 aaKnown RBP12.45□□□□□ -0.42
LINC00539-203ENST00000434601 ZNF576Q9H609 170 aa12.45□□□□□ -0.42
LINC00539-203ENST00000434601 CYP26B1Q9NR63 512 aa12.45□□□□□ -0.42
LINC00539-203ENST00000434601 OLFML3Q9NRN5 406 aa12.45□□□□□ -0.42
LINC00539-203ENST00000434601 TBC1D7Q9P0N9 293 aa12.45□□□□□ -0.42
LINC00539-203ENST00000434601 Q9Y3F1 56 aa12.45□□□□□ -0.42
LINC00539-203ENST00000434601 NFE2L3Q9Y4A8 694 aa12.45□□□□□ -0.42
LINC00539-203ENST00000434601 BICDL2A1A5D9 508 aa12.44□□□□□ -0.42
LINC00539-203ENST00000434601 ADCY6O43306 1168 aa12.44□□□□□ -0.42
LINC00539-203ENST00000434601 DGAT1O75907 488 aa12.44□□□□□ -0.42
LINC00539-203ENST00000434601 KIF20AO95235 890 aa12.44□□□□□ -0.42
LINC00539-203ENST00000434601 CCNE1P24864 410 aa12.44□□□□□ -0.42
LINC00539-203ENST00000434601 SLC26A2P50443 739 aa12.44□□□□□ -0.42
LINC00539-203ENST00000434601 CCDC173Q0VFZ6 552 aa12.44□□□□□ -0.42
LINC00539-203ENST00000434601 TPD52L1Q16890 204 aaPredicted RBP12.44□□□□□ -0.42
LINC00539-203ENST00000434601 MTERF2Q49AM1 385 aa12.44□□□□□ -0.42
LINC00539-203ENST00000434601 PLPPR4Q7Z2D5 763 aa12.44□□□□□ -0.42
LINC00539-203ENST00000434601 TRIM50Q86XT4 487 aa12.44□□□□□ -0.42
LINC00539-203ENST00000434601 MYOCDQ8IZQ8 938 aa12.44□□□□□ -0.42
LINC00539-203ENST00000434601 DAW1Q8N136 415 aa12.44□□□□□ -0.42
LINC00539-203ENST00000434601 MYCT1Q8N699 235 aa12.44□□□□□ -0.42
LINC00539-203ENST00000434601 GLIS3Q8NEA6 775 aa12.44□□□□□ -0.42
LINC00539-203ENST00000434601 MCPH1Q8NEM0 835 aa12.44□□□□□ -0.42
LINC00539-203ENST00000434601 AFG1LQ8WV93 481 aa12.44□□□□□ -0.42
LINC00539-203ENST00000434601 GLG1Q92896 1179 aa12.44□□□□□ -0.42
LINC00539-203ENST00000434601 SH2D3AQ9BRG2 576 aa12.44□□□□□ -0.42
LINC00539-203ENST00000434601 FGFBP2Q9BYJ0 223 aa12.44□□□□□ -0.42
LINC00539-203ENST00000434601 HSD3B7Q9H2F3 369 aa12.44□□□□□ -0.42
LINC00539-203ENST00000434601 SMARCAD1Q9H4L7 1026 aa12.44□□□□□ -0.42
LINC00539-203ENST00000434601 MRPL44Q9H9J2 332 aaKnown RBP12.44□□□□□ -0.42
LINC00539-203ENST00000434601 FANCLQ9NW38 375 aa12.44□□□□□ -0.42
LINC00539-203ENST00000434601 PPME1Q9Y570 386 aa12.44□□□□□ -0.42
LINC00539-203ENST00000434601 NCOR1O75376 2440 aa12.44□□□□□ -0.42
LINC00539-203ENST00000434601 UBE4BO95155 1302 aa12.43□□□□□ -0.42
LINC00539-203ENST00000434601 CHD9Q3L8U1 2897 aa12.43□□□□□ -0.42
LINC00539-203ENST00000434601 TRIM49BA6NDI0 452 aa12.43□□□□□ -0.42
LINC00539-203ENST00000434601 EIF3DO15371 548 aaKnown RBP eCLIP12.43□□□□□ -0.42
LINC00539-203ENST00000434601 AP5Z1O43299 807 aa12.43□□□□□ -0.42
LINC00539-203ENST00000434601 GCNT3O95395 438 aa12.43□□□□□ -0.42
LINC00539-203ENST00000434601 ADCY5O95622 1261 aa12.43□□□□□ -0.42
LINC00539-203ENST00000434601 CD4P01730 458 aa12.43□□□□□ -0.42
LINC00539-203ENST00000434601 MMP3P08254 477 aa12.43□□□□□ -0.42
LINC00539-203ENST00000434601 CSF2RAP15509 400 aa12.43□□□□□ -0.42
LINC00539-203ENST00000434601 ZNF18P17022 549 aa12.43□□□□□ -0.42
LINC00539-203ENST00000434601 MARK3P27448 753 aa12.43□□□□□ -0.42
LINC00539-203ENST00000434601 CASP5P51878 434 aa12.43□□□□□ -0.42
LINC00539-203ENST00000434601 PMS1P54277 932 aaKnown RBP12.43□□□□□ -0.42
LINC00539-203ENST00000434601 GRIN2CQ14957 1233 aa12.43□□□□□ -0.42
LINC00539-203ENST00000434601 FSCN1Q16658 493 aaKnown RBP12.43□□□□□ -0.42
LINC00539-203ENST00000434601 BMT2Q1RMZ1 405 aa12.43□□□□□ -0.42
LINC00539-203ENST00000434601 TMEM240Q5SV17 173 aa12.43□□□□□ -0.42
LINC00539-203ENST00000434601 TTI2Q6NXR4 508 aa12.43□□□□□ -0.42
LINC00539-203ENST00000434601 FOXR2Q6PJQ5 311 aa12.43□□□□□ -0.42
LINC00539-203ENST00000434601 MAEAQ7L5Y9 396 aa12.43□□□□□ -0.42
LINC00539-203ENST00000434601 TLK2Q86UE8 772 aa12.43□□□□□ -0.42
LINC00539-203ENST00000434601 FAM178BQ8IXR5 827 aa12.43□□□□□ -0.42
LINC00539-203ENST00000434601 ATP8B4Q8TF62 1192 aa12.43□□□□□ -0.42
LINC00539-203ENST00000434601 SCFD1Q8WVM8 642 aa12.43□□□□□ -0.42
LINC00539-203ENST00000434601 BBXQ8WY36 941 aaPredicted RBP12.43□□□□□ -0.42
LINC00539-203ENST00000434601 GAS2L1Q99501 681 aaPredicted RBP12.43□□□□□ -0.42
LINC00539-203ENST00000434601 NIFKQ9BYG3 293 aaKnown RBP12.43□□□□□ -0.42
LINC00539-203ENST00000434601 ATP6V0A4Q9HBG4 840 aa12.43□□□□□ -0.42
LINC00539-203ENST00000434601 IL23AQ9NPF7 189 aa12.43□□□□□ -0.42
LINC00539-203ENST00000434601 NRBP2Q9NSY0 501 aa12.43□□□□□ -0.42
LINC00539-203ENST00000434601 LARSQ9P2J5 1176 aaKnown RBP12.43□□□□□ -0.42
LINC00539-203ENST00000434601 GNEQ9Y223 722 aaKnown RBP12.43□□□□□ -0.42
LINC00539-203ENST00000434601 GBF1Q92538 1859 aa12.42□□□□□ -0.42
LINC00539-203ENST00000434601 SFI1A8K8P3 1242 aa12.42□□□□□ -0.42
LINC00539-203ENST00000434601 LGALS2P05162 132 aa12.42□□□□□ -0.42
LINC00539-203ENST00000434601 MYBP10242 640 aa12.42□□□□□ -0.42
LINC00539-203ENST00000434601 MAPTP10636 758 aaKnown RBP12.42□□□□□ -0.42
LINC00539-203ENST00000434601 HOXD8P13378 290 aaPredicted RBP12.42□□□□□ -0.42
LINC00539-203ENST00000434601 ATP1A3P13637 1013 aa12.42□□□□□ -0.42
LINC00539-203ENST00000434601 PLS3P13797 630 aa12.42□□□□□ -0.42
LINC00539-203ENST00000434601 RFC5P40937 340 aa12.42□□□□□ -0.42
LINC00539-203ENST00000434601 POLGP54098 1239 aaPredicted RBP12.42□□□□□ -0.42
LINC00539-203ENST00000434601 BEX3Q00994 111 aa12.42□□□□□ -0.42
LINC00539-203ENST00000434601 LRRC63Q05C16 580 aa12.42□□□□□ -0.42
LINC00539-203ENST00000434601 ITGA7Q13683 1181 aa12.42□□□□□ -0.42
LINC00539-203ENST00000434601 EMC2Q15006 297 aa12.42□□□□□ -0.42
LINC00539-203ENST00000434601 PLCB4Q15147 1175 aa12.42□□□□□ -0.42
LINC00539-203ENST00000434601 RAB30Q15771 203 aa12.42□□□□□ -0.42
LINC00539-203ENST00000434601 ODR4Q5SWX8 454 aa12.42□□□□□ -0.42
LINC00539-203ENST00000434601 FAM102BQ5T8I3 360 aa12.42□□□□□ -0.42
LINC00539-203ENST00000434601 RASIP1Q5U651 963 aa12.42□□□□□ -0.42
LINC00539-203ENST00000434601 CDKAL1Q5VV42 579 aa12.42□□□□□ -0.42
LINC00539-203ENST00000434601 CENPPQ6IPU0 288 aa12.42□□□□□ -0.42
LINC00539-203ENST00000434601 STXBP4Q6ZWJ1 553 aa12.42□□□□□ -0.42
LINC00539-203ENST00000434601 C16orf59Q7L2K0 433 aa12.42□□□□□ -0.42
LINC00539-203ENST00000434601 EPM2AIP1Q7L775 607 aaPredicted RBP12.42□□□□□ -0.42
LINC00539-203ENST00000434601 SLC43A3Q8NBI5 491 aa12.42□□□□□ -0.42
LINC00539-203ENST00000434601 NOC3LQ8WTT2 800 aaKnown RBP12.42□□□□□ -0.42
LINC00539-203ENST00000434601 KIFAP3Q92845 792 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms