RNA–Protein interactions for RNA: ENST00000434376.6

SCARF1-203, Transcript of scavenger receptor class F member 1, humanhuman

TSL 1 (best)

Gene SCARF1, Length 3,342 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-203ENST00000434376 KRT5P13647 590 aa16.92■□□□□ 0.3
SCARF1-203ENST00000434376 KCNA3P22001 575 aa16.92■□□□□ 0.3
SCARF1-203ENST00000434376 FAM153CQ494X1 144 aa16.92■□□□□ 0.3
SCARF1-203ENST00000434376 MAATS1Q7Z4T9 603 aa16.92■□□□□ 0.3
SCARF1-203ENST00000434376 CBWD2Q8IUF1 395 aa16.92■□□□□ 0.3
SCARF1-203ENST00000434376 MXRA8Q9BRK3 442 aa16.92■□□□□ 0.3
SCARF1-203ENST00000434376 GABBR1Q9UBS5 961 aa16.92■□□□□ 0.3
SCARF1-203ENST00000434376 FAM153AQ9UHL3 310 aa16.92■□□□□ 0.3
SCARF1-203ENST00000434376 FOXN3O00409 490 aaPredicted RBP16.91■□□□□ 0.3
SCARF1-203ENST00000434376 ITGA4P13612 1032 aa16.91■□□□□ 0.3
SCARF1-203ENST00000434376 TNFAIP3P21580 790 aa16.91■□□□□ 0.3
SCARF1-203ENST00000434376 MYL7Q01449 175 aa16.91■□□□□ 0.3
SCARF1-203ENST00000434376 SLC30A5Q8TAD4 765 aa16.91■□□□□ 0.3
SCARF1-203ENST00000434376 DHX38Q92620 1227 aaKnown RBP16.91■□□□□ 0.3
SCARF1-203ENST00000434376 PICK1Q9NRD5 415 aa16.91■□□□□ 0.3
SCARF1-203ENST00000434376 RGS17Q9UGC6 210 aaPredicted RBP16.91■□□□□ 0.3
SCARF1-203ENST00000434376 SEPT9Q9UHD8 586 aaPredicted RBP16.91■□□□□ 0.3
SCARF1-203ENST00000434376 CYP3A7-CYP3A51PA0A087WV96 503 aa16.91■□□□□ 0.3
SCARF1-203ENST00000434376 KRT14P02533 472 aa16.91■□□□□ 0.3
SCARF1-203ENST00000434376 FECHP22830 423 aa16.91■□□□□ 0.3
SCARF1-203ENST00000434376 CYP3A7P24462 503 aa16.91■□□□□ 0.3
SCARF1-203ENST00000434376 TKFCQ3LXA3 575 aa16.91■□□□□ 0.3
SCARF1-203ENST00000434376 DAB2IPQ5VWQ8 1189 aa16.91■□□□□ 0.3
SCARF1-203ENST00000434376 PAPD7Q5XG87 772 aaKnown RBP16.91■□□□□ 0.3
SCARF1-203ENST00000434376 ARHGAP27Q6ZUM4 889 aa16.91■□□□□ 0.3
SCARF1-203ENST00000434376 OR2W6PQ8NHA6 318 aa16.91■□□□□ 0.3
SCARF1-203ENST00000434376 SYTL5Q8TDW5 730 aaPredicted RBP16.91■□□□□ 0.3
SCARF1-203ENST00000434376 FAM169AQ9Y6X4 670 aa16.91■□□□□ 0.3
SCARF1-203ENST00000434376 BRWD3Q6RI45 1802 aa16.91■□□□□ 0.3
SCARF1-203ENST00000434376 GNA14O95837 355 aa16.91■□□□□ 0.3
SCARF1-203ENST00000434376 HPDP32754 393 aaPredicted RBP16.91■□□□□ 0.3
SCARF1-203ENST00000434376 ORC2Q13416 577 aaPredicted RBP16.91■□□□□ 0.3
SCARF1-203ENST00000434376 MOB2Q70IA6 237 aa16.91■□□□□ 0.3
SCARF1-203ENST00000434376 ZNF720Q7Z2F6 126 aa16.91■□□□□ 0.3
SCARF1-203ENST00000434376 EHMT1Q9H9B1 1298 aa16.91■□□□□ 0.3
SCARF1-203ENST00000434376 MYO3BQ8WXR4 1341 aa16.9■□□□□ 0.3
SCARF1-203ENST00000434376 H2AFZP0C0S5 128 aa16.9■□□□□ 0.3
SCARF1-203ENST00000434376 YWHABP31946 246 aaKnown RBP16.9■□□□□ 0.3
SCARF1-203ENST00000434376 NT5C2P49902 561 aa16.9■□□□□ 0.3
SCARF1-203ENST00000434376 PDCLQ13371 301 aa16.9■□□□□ 0.3
SCARF1-203ENST00000434376 H2AFVQ71UI9 128 aa16.9■□□□□ 0.3
SCARF1-203ENST00000434376 ZBTB10Q96DT7 871 aa16.9■□□□□ 0.3
SCARF1-203ENST00000434376 GANQ9H2C0 597 aa16.9■□□□□ 0.3
SCARF1-203ENST00000434376 CTTNBP2NLQ9P2B4 639 aa16.9■□□□□ 0.3
SCARF1-203ENST00000434376 LARSQ9P2J5 1176 aaKnown RBP16.9■□□□□ 0.3
SCARF1-203ENST00000434376 ANKFY1Q9P2R3 1169 aa16.9■□□□□ 0.3
SCARF1-203ENST00000434376 NAGPAQ9UK23 515 aa16.9■□□□□ 0.3
SCARF1-203ENST00000434376 GRID2IPA4D2P6 1211 aa16.9■□□□□ 0.3
SCARF1-203ENST00000434376 PDXKO00764 312 aa16.9■□□□□ 0.3
SCARF1-203ENST00000434376 NDUFAB1O14561 156 aa16.9■□□□□ 0.3
SCARF1-203ENST00000434376 FMO5P49326 533 aa16.9■□□□□ 0.3
SCARF1-203ENST00000434376 GALCP54803 685 aa16.9■□□□□ 0.3
SCARF1-203ENST00000434376 FSTL1Q12841 308 aa16.9■□□□□ 0.3
SCARF1-203ENST00000434376 MESDQ14696 234 aa16.9■□□□□ 0.3
SCARF1-203ENST00000434376 CFAP221Q4G0U5 840 aa16.9■□□□□ 0.3
SCARF1-203ENST00000434376 LLGL2Q6P1M3 1020 aa16.9■□□□□ 0.3
SCARF1-203ENST00000434376 HAUS6Q7Z4H7 955 aa16.9■□□□□ 0.3
SCARF1-203ENST00000434376 NLRX1Q86UT6 975 aa16.9■□□□□ 0.3
SCARF1-203ENST00000434376 VPS36Q86VN1 386 aa16.9■□□□□ 0.3
SCARF1-203ENST00000434376 TMEM143Q96AN5 459 aa16.9■□□□□ 0.3
SCARF1-203ENST00000434376 CAPS2Q9BXY5 557 aa16.9■□□□□ 0.3
SCARF1-203ENST00000434376 A0A1W2PQJ5 194 aa16.9■□□□□ 0.3
SCARF1-203ENST00000434376 OSTNP61366 133 aa16.9■□□□□ 0.3
SCARF1-203ENST00000434376 DAW1Q8N136 415 aa16.9■□□□□ 0.3
SCARF1-203ENST00000434376 FAM118BQ9BPY3 351 aa16.9■□□□□ 0.3
SCARF1-203ENST00000434376 AMACRQ9UHK6 382 aa16.9■□□□□ 0.3
SCARF1-203ENST00000434376 FEM1BQ9UK73 627 aa16.9■□□□□ 0.3
SCARF1-203ENST00000434376 CDK5RAP2Q96SN8 1893 aa16.89■□□□□ 0.3
SCARF1-203ENST00000434376 ZBED4O75132 1171 aa16.89■□□□□ 0.29
SCARF1-203ENST00000434376 ATP2C2O75185 946 aa16.89■□□□□ 0.29
SCARF1-203ENST00000434376 KIAA0754O94854 1291 aa16.89■□□□□ 0.29
SCARF1-203ENST00000434376 TUBB2AQ13885 445 aa16.89■□□□□ 0.29
SCARF1-203ENST00000434376 EFCAB13Q8IY85 973 aa16.89■□□□□ 0.29
SCARF1-203ENST00000434376 CRYGNQ8WXF5 182 aa16.89■□□□□ 0.29
SCARF1-203ENST00000434376 POMGNT1Q8WZA1 660 aa16.89■□□□□ 0.29
SCARF1-203ENST00000434376 TUBB2BQ9BVA1 445 aa16.89■□□□□ 0.29
SCARF1-203ENST00000434376 CAPN7Q9Y6W3 813 aa16.89■□□□□ 0.29
SCARF1-203ENST00000434376 ANKRD31Q8N7Z5 1873 aa16.89■□□□□ 0.29
SCARF1-203ENST00000434376 DDX3XO00571 662 aaKnown RBP eCLIP16.89■□□□□ 0.29
SCARF1-203ENST00000434376 HNRNPDLO14979 420 aaKnown RBP16.89■□□□□ 0.29
SCARF1-203ENST00000434376 CNTN2Q02246 1040 aa16.89■□□□□ 0.29
SCARF1-203ENST00000434376 TCHPQ9BT92 498 aa16.89■□□□□ 0.29
SCARF1-203ENST00000434376 GGA3Q9NZ52 723 aa16.89■□□□□ 0.29
SCARF1-203ENST00000434376 PPP3CAQ08209 521 aa16.88■□□□□ 0.29
SCARF1-203ENST00000434376 TMEM132AQ24JP5 1023 aa16.88■□□□□ 0.29
SCARF1-203ENST00000434376 IRF2BP2Q7Z5L9 587 aa16.88■□□□□ 0.29
SCARF1-203ENST00000434376 PASD1Q8IV76 773 aa16.88■□□□□ 0.29
SCARF1-203ENST00000434376 ARHGEF19Q8IW93 802 aa16.88■□□□□ 0.29
SCARF1-203ENST00000434376 GMLQ99445 158 aa16.88■□□□□ 0.29
SCARF1-203ENST00000434376 INTS2Q9H0H0 1204 aaKnown RBP16.88■□□□□ 0.29
SCARF1-203ENST00000434376 ZNF408Q9H9D4 720 aa16.88■□□□□ 0.29
SCARF1-203ENST00000434376 DENND3A2RUS2 1198 aa16.88■□□□□ 0.29
SCARF1-203ENST00000434376 CSDE1O75534 798 aaKnown RBP16.88■□□□□ 0.29
SCARF1-203ENST00000434376 QARSP47897 775 aaKnown RBP16.88■□□□□ 0.29
SCARF1-203ENST00000434376 ACOT2P49753 483 aa16.88■□□□□ 0.29
SCARF1-203ENST00000434376 VPS41P49754 854 aa16.88■□□□□ 0.29
SCARF1-203ENST00000434376 IRAK1P51617 712 aa16.88■□□□□ 0.29
SCARF1-203ENST00000434376 BIRC3Q13489 604 aa16.88■□□□□ 0.29
SCARF1-203ENST00000434376 EPHA7Q15375 998 aa16.88■□□□□ 0.29
SCARF1-203ENST00000434376 TSEN2Q8NCE0 465 aaKnown RBP16.88■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms