RNA–Protein interactions for RNA: ENST00000433394.1

USP54-206, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 5

Gene USP54, Length 600 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-206ENST00000433394 COMMD10Q9Y6G5 202 aa7.58□□□□□ -1.2
USP54-206ENST00000433394 A0A0A6YYJ9 748 aa7.57□□□□□ -1.2
USP54-206ENST00000433394 PLEKHD1A6NEE1 506 aa7.57□□□□□ -1.2
USP54-206ENST00000433394 MAFO75444 373 aaPredicted RBP7.57□□□□□ -1.2
USP54-206ENST00000433394 C8BP07358 591 aa7.57□□□□□ -1.2
USP54-206ENST00000433394 POU2F2P09086 479 aa7.57□□□□□ -1.2
USP54-206ENST00000433394 CCT2P78371 535 aaKnown RBP7.57□□□□□ -1.2
USP54-206ENST00000433394 TRIM25Q14258 630 aaKnown RBP7.57□□□□□ -1.2
USP54-206ENST00000433394 GRAMD4Q6IC98 578 aa7.57□□□□□ -1.2
USP54-206ENST00000433394 BTNL9Q6UXG8 535 aa7.57□□□□□ -1.2
USP54-206ENST00000433394 USP45Q70EL2 814 aa7.57□□□□□ -1.2
USP54-206ENST00000433394 SRGAP1Q7Z6B7 1085 aa7.57□□□□□ -1.2
USP54-206ENST00000433394 C11orf96Q7Z7L8 435 aa7.57□□□□□ -1.2
USP54-206ENST00000433394 B3GNT8Q7Z7M8 397 aa7.57□□□□□ -1.2
USP54-206ENST00000433394 SMARCC2Q8TAQ2 1214 aa7.57□□□□□ -1.2
USP54-206ENST00000433394 FAM168AQ92567 244 aa7.57□□□□□ -1.2
USP54-206ENST00000433394 HDAC10Q969S8 669 aa7.57□□□□□ -1.2
USP54-206ENST00000433394 C1GALT1C1Q96EU7 318 aa7.57□□□□□ -1.2
USP54-206ENST00000433394 TACO1Q9BSH4 297 aaKnown RBP7.57□□□□□ -1.2
USP54-206ENST00000433394 ZFP64Q9NPA5 681 aa7.57□□□□□ -1.2
USP54-206ENST00000433394 ANLNQ9NQW6 1124 aa7.57□□□□□ -1.2
USP54-206ENST00000433394 SAE1Q9UBE0 346 aaPredicted RBP7.57□□□□□ -1.2
USP54-206ENST00000433394 CROTQ9UKG9 612 aa7.57□□□□□ -1.2
USP54-206ENST00000433394 FAM171A2A8MVW0 826 aa7.56□□□□□ -1.2
USP54-206ENST00000433394 CHGBP05060 677 aa7.56□□□□□ -1.2
USP54-206ENST00000433394 IFIT2P09913 472 aaKnown RBP7.56□□□□□ -1.2
USP54-206ENST00000433394 TRIM27P14373 513 aa7.56□□□□□ -1.2
USP54-206ENST00000433394 JUNBP17275 347 aaPredicted RBP7.56□□□□□ -1.2
USP54-206ENST00000433394 PDCP20941 246 aa7.56□□□□□ -1.2
USP54-206ENST00000433394 ATAT1Q5SQI0 421 aa7.56□□□□□ -1.2
USP54-206ENST00000433394 ARTNQ5T4W7 220 aa7.56□□□□□ -1.2
USP54-206ENST00000433394 THEMIS2Q5TEJ8 643 aa7.56□□□□□ -1.2
USP54-206ENST00000433394 LILRA6Q6PI73 481 aa7.56□□□□□ -1.2
USP54-206ENST00000433394 NBPF11Q86T75 865 aa7.56□□□□□ -1.2
USP54-206ENST00000433394 LDHDQ86WU2 507 aa7.56□□□□□ -1.2
USP54-206ENST00000433394 PROSER1Q86XN7 944 aa7.56□□□□□ -1.2
USP54-206ENST00000433394 IFNL2Q8IZJ0 200 aa7.56□□□□□ -1.2
USP54-206ENST00000433394 SAMD3Q8N6K7 520 aa7.56□□□□□ -1.2
USP54-206ENST00000433394 OR5AN1Q8NGI8 311 aa7.56□□□□□ -1.2
USP54-206ENST00000433394 HPS3Q969F9 1004 aa7.56□□□□□ -1.2
USP54-206ENST00000433394 COA7Q96BR5 231 aa7.56□□□□□ -1.2
USP54-206ENST00000433394 DYDC2Q96IM9 177 aa7.56□□□□□ -1.2
USP54-206ENST00000433394 RPS6KC1Q96S38 1066 aa7.56□□□□□ -1.2
USP54-206ENST00000433394 SARGQ9BW04 601 aa7.56□□□□□ -1.2
USP54-206ENST00000433394 ZNF700Q9H0M5 742 aa7.56□□□□□ -1.2
USP54-206ENST00000433394 NSUN3Q9H649 340 aaKnown RBP7.56□□□□□ -1.2
USP54-206ENST00000433394 GREM2Q9H772 168 aa7.56□□□□□ -1.2
USP54-206ENST00000433394 KMT5AQ9NQR1 393 aa7.56□□□□□ -1.2
USP54-206ENST00000433394 POLR3BQ9NW08 1133 aaPredicted RBP7.56□□□□□ -1.2
USP54-206ENST00000433394 RBPJLQ9UBG7 517 aa7.56□□□□□ -1.2
USP54-206ENST00000433394 DAPK3O43293 454 aa7.55□□□□□ -1.2
USP54-206ENST00000433394 FSBPO95073 299 aa7.55□□□□□ -1.2
USP54-206ENST00000433394 PHKG2P15735 406 aa7.55□□□□□ -1.2
USP54-206ENST00000433394 SAFBQ15424 915 aaKnown RBP eCLIP7.55□□□□□ -1.2
USP54-206ENST00000433394 STILQ15468 1287 aa7.55□□□□□ -1.2
USP54-206ENST00000433394 ADRM1Q16186 407 aa7.55□□□□□ -1.2
USP54-206ENST00000433394 PGS1Q32NB8 556 aa7.55□□□□□ -1.2
USP54-206ENST00000433394 CCDC157Q569K6 752 aa7.55□□□□□ -1.2
USP54-206ENST00000433394 STPG3Q8N7X2 389 aa7.55□□□□□ -1.2
USP54-206ENST00000433394 TSPEARQ8WU66 669 aa7.55□□□□□ -1.2
USP54-206ENST00000433394 RUNDC1Q96C34 613 aa7.55□□□□□ -1.2
USP54-206ENST00000433394 MVB12AQ96EY5 273 aa7.55□□□□□ -1.2
USP54-206ENST00000433394 TAAR9Q96RI9 348 aa7.55□□□□□ -1.2
USP54-206ENST00000433394 MPHOSPH6Q99547 160 aaKnown RBP7.55□□□□□ -1.2
USP54-206ENST00000433394 GTPBP4Q9BZE4 634 aaKnown RBP7.55□□□□□ -1.2
USP54-206ENST00000433394 USP25Q9UHP3 1055 aa7.55□□□□□ -1.2
USP54-206ENST00000433394 TUBD1Q9UJT1 453 aa7.55□□□□□ -1.2
USP54-206ENST00000433394 TMPRSS11EQ9UL52 423 aa7.55□□□□□ -1.2
USP54-206ENST00000433394 H0Y858 1186 aa7.54□□□□□ -1.2
USP54-206ENST00000433394 SEMA7AO75326 666 aa7.54□□□□□ -1.2
USP54-206ENST00000433394 EIF3JO75822 258 aaKnown RBP7.54□□□□□ -1.2
USP54-206ENST00000433394 ITGA1P56199 1179 aa7.54□□□□□ -1.2
USP54-206ENST00000433394 SESN2P58004 480 aaPredicted RBP7.54□□□□□ -1.2
USP54-206ENST00000433394 IL13RA1P78552 427 aa7.54□□□□□ -1.2
USP54-206ENST00000433394 CD83Q01151 205 aa7.54□□□□□ -1.2
USP54-206ENST00000433394 MEF2AQ02078 507 aaPredicted RBP7.54□□□□□ -1.2
USP54-206ENST00000433394 MGAT5Q09328 741 aa7.54□□□□□ -1.2
USP54-206ENST00000433394 ZNF267Q14586 743 aaPredicted RBP7.54□□□□□ -1.2
USP54-206ENST00000433394 COBLL1Q53SF7 1204 aa7.54□□□□□ -1.2
USP54-206ENST00000433394 CBLL1Q75N03 491 aa7.54□□□□□ -1.2
USP54-206ENST00000433394 DENND1CQ8IV53 801 aa7.54□□□□□ -1.2
USP54-206ENST00000433394 KYQ8NBH2 561 aa7.54□□□□□ -1.2
USP54-206ENST00000433394 GLB1L3Q8NCI6 653 aaPredicted RBP7.54□□□□□ -1.2
USP54-206ENST00000433394 DIS3LQ8TF46 1054 aaKnown RBP7.54□□□□□ -1.2
USP54-206ENST00000433394 MZB1Q8WU39 189 aa7.54□□□□□ -1.2
USP54-206ENST00000433394 DIRC2Q96SL1 478 aa7.54□□□□□ -1.2
USP54-206ENST00000433394 C7orf25Q9BPX7 421 aa7.54□□□□□ -1.2
USP54-206ENST00000433394 SLC12A5Q9H2X9 1139 aa7.54□□□□□ -1.2
USP54-206ENST00000433394 RBM12Q9NTZ6 932 aaKnown RBP7.54□□□□□ -1.2
USP54-206ENST00000433394 EVLQ9UI08 416 aaPredicted RBP7.54□□□□□ -1.2
USP54-206ENST00000433394 INTUQ9ULD6 942 aa7.54□□□□□ -1.2
USP54-206ENST00000433394 WASF3Q9UPY6 502 aa7.54□□□□□ -1.2
USP54-206ENST00000433394 IRS2Q9Y4H2 1338 aa7.53□□□□□ -1.2
USP54-206ENST00000433394 A0A0G2JNJ9 132 aa7.53□□□□□ -1.2
USP54-206ENST00000433394 TEX51A0A1B0GUA7 166 aa7.53□□□□□ -1.2
USP54-206ENST00000433394 PHF2O75151 1096 aa7.53□□□□□ -1.2
USP54-206ENST00000433394 GSPT1P15170 499 aaKnown RBP7.53□□□□□ -1.2
USP54-206ENST00000433394 IL12RB1P42701 662 aa7.53□□□□□ -1.2
USP54-206ENST00000433394 GRM3Q14832 879 aa7.53□□□□□ -1.2
USP54-206ENST00000433394 SYCP2LQ5T4T6 812 aa7.53□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms